CircRNA Information

General Information
circRNA Basic Information
CircID chr15:84839702|84839906
Strand +
CircType exon
Host Gene ENSG00000136383.6;
Algorism CIRI2;
Sequence CTCCCCAGGCACCGCCTTCTCGTGCTTCCAGCTCTGCTCGATCTCGCGCAGCTTTGCCGCAGCCTTGCGCTTCAACTTGGCGAACCAGCGCTGGTGGATCTTGTACTCAGTCATGGTGCCCACCTCCAGGACCCCTGAGCAGGACACAATGCCCTTGCTGTTCTGGGCAGAGGCCTGGTAGATGGCGGCATCTTCTTCTCGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:84839702|84839906 hsa-miR-320a-5p 0 0 1
chr15:84839702|84839906 hsa-miR-320a-3p 0 0 1
chr15:84839702|84839906 hsa-miR-370-5p 0 0 1
chr15:84839702|84839906 hsa-miR-370-3p 0 0 1
chr15:84839702|84839906 hsa-miR-592 0 0 1
chr15:84839702|84839906 hsa-miR-599 0 0 1
chr15:84839702|84839906 hsa-miR-604 0 0 1
chr15:84839702|84839906 hsa-miR-661 0 0 1
chr15:84839702|84839906 hsa-miR-541-5p 0 0 1
chr15:84839702|84839906 hsa-miR-541-3p 0 0 1
chr15:84839702|84839906 hsa-miR-939-5p 0 0 1
chr15:84839702|84839906 hsa-miR-939-3p 0 0 1
chr15:84839702|84839906 hsa-miR-1226-5p 0 0 1
chr15:84839702|84839906 hsa-miR-1226-3p 0 0 1
chr15:84839702|84839906 hsa-miR-1253 0 1 1
chr15:84839702|84839906 hsa-miR-1256 0 0 1
chr15:84839702|84839906 hsa-miR-1266-5p 0 0 1
chr15:84839702|84839906 hsa-miR-1266-3p 0 0 1
chr15:84839702|84839906 hsa-miR-127-5p 0 0 1
chr15:84839702|84839906 hsa-miR-671-5p 1 0 1
chr15:84839702|84839906 hsa-miR-615-5p 0 0 1
chr15:84839702|84839906 hsa-miR-767-5p 0 1 1
chr15:84839702|84839906 hsa-miR-654-5p 0 0 1
chr15:84839702|84839906 hsa-miR-767-3p 0 0 1
chr15:84839702|84839906 hsa-miR-324-3p 0 0 1
chr15:84839702|84839906 hsa-miR-320b 1 1 1
chr15:84839702|84839906 hsa-miR-320c 1 0 1
chr15:84839702|84839906 hsa-miR-320d 0 0 1
chr15:84839702|84839906 hsa-miR-550 0 0 1
chr15:84839702|84839906 hsa-miR-1254 0 0 1
chr15:84839702|84839906 hsa-miR-638 1 0 0
chr15:84839702|84839906 hsa-miR-762 1 0 0
chr15:84839702|84839906 hsa-miR-2861 1 0 0
chr15:84839702|84839906 hsa-miR-3185 0 1 0
chr15:84839702|84839906 hsa-miR-3197 1 1 0
chr15:84839702|84839906 hsa-miR-4321 1 0 0
chr15:84839702|84839906 hsa-miR-4254 0 1 0
chr15:84839702|84839906 hsa-miR-3652 1 0 0
chr15:84839702|84839906 hsa-miR-4429 1 1 0
chr15:84839702|84839906 hsa-miR-3135b 1 0 0
chr15:84839702|84839906 hsa-miR-4492 1 0 0
chr15:84839702|84839906 hsa-miR-4498 1 0 0
chr15:84839702|84839906 hsa-miR-4656 1 0 0
chr15:84839702|84839906 hsa-miR-4706 1 0 0
chr15:84839702|84839906 hsa-miR-4734 1 0 0
chr15:84839702|84839906 hsa-miR-4767 1 0 0
chr15:84839702|84839906 hsa-miR-6132 1 1 0
chr15:84839702|84839906 hsa-miR-6165 1 0 0
chr15:84839702|84839906 hsa-miR-7706 1 1 0
chr15:84839702|84839906 hsa-miR-9899 1 0 0
chr15:84839702|84839906 hsa-miR-6765-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6746-5p 1 0 0
chr15:84839702|84839906 hsa-miR-593-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6820-5p 1 1 0
chr15:84839702|84839906 hsa-miR-6827-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6770-5p 0 1 0
chr15:84839702|84839906 hsa-miR-6782-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6753-5p 1 0 0
chr15:84839702|84839906 hsa-miR-4732-5p 1 1 0
chr15:84839702|84839906 hsa-miR-6828-5p 0 1 0
chr15:84839702|84839906 hsa-miR-6781-5p 1 0 0
chr15:84839702|84839906 hsa-miR-7112-5p 1 0 0
chr15:84839702|84839906 hsa-miR-7846-3p 1 0 0
chr15:84839702|84839906 hsa-miR-1225-5p 1 0 0
chr15:84839702|84839906 hsa-miR-4661-3p 0 1 0
chr15:84839702|84839906 hsa-miR-4746-3p 0 1 0
chr15:84839702|84839906 hsa-miR-503-3p 0 1 0
chr15:84839702|84839906 hsa-miR-4650-5p 0 1 0
chr15:84839702|84839906 hsa-miR-4738-5p 0 1 0
chr15:84839702|84839906 hsa-miR-10400-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6775-5p 1 0 0
chr15:84839702|84839906 hsa-miR-5001-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6851-5p 1 1 0
chr15:84839702|84839906 hsa-miR-6722-3p 1 0 0
chr15:84839702|84839906 hsa-miR-3620-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6780b-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6836-5p 1 0 0
chr15:84839702|84839906 hsa-miR-4685-5p 1 0 0
chr15:84839702|84839906 hsa-miR-4725-3p 1 0 0
chr15:84839702|84839906 hsa-miR-6729-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6735-5p 1 0 0
chr15:84839702|84839906 hsa-miR-6885-5p 1 0 0
chr15:84839702|84839906 hsa-miR-550a-3-5p 0 1 0
chr15:84839702|84839906 hsa-miR-550a-5p 0 1 0
chr15:84839702|84839906 hsa-miR-4757-5p 0 1 0
chr15:84839702|84839906 hsa-miR-10400-3p 1 0 0
chr15:84839702|84839906 hsa-miR-9851-3p 1 1 0
chr15:84839702|84839906 hsa-miR-3136-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:84839702|84839906
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MLDLAQLCRSLALQLGEPALVDLVLSHGAHLQDP
Nucleotide Sequence CTGCTCGATCTCGCGCAGCTTTGCCGCAGCCTTGCGCTTCAACTTGGCGAACCAGCGCTGGTGGATCTTGTACTCAGTCATGGTGCCCACCTCCAGGACCCCTGA
CircID chr15:84839702|84839906
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MRFNLANQRWWILYSVMVPTSRTPEQDTMPLLFWAEAW
Nucleotide Sequence TTGCGCTTCAACTTGGCGAACCAGCGCTGGTGGATCTTGTACTCAGTCATGGTGCCCACCTCCAGGACCCCTGAGCAGGACACAATGCCCTTGCTGTTCTGGGCAGAGGCCTGGTAG
CircID chr15:84839702|84839906
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MPQPCASTWRTSAGGSCTQSWCPPPGPLSRTQCPCCSGQRPGRWRHLLLD
Nucleotide Sequence TTGCCGCAGCCTTGCGCTTCAACTTGGCGAACCAGCGCTGGTGGATCTTGTACTCAGTCATGGTGCCCACCTCCAGGACCCCTGAGCAGGACACAATGCCCTTGCTGTTCTGGGCAGAGGCCTGGTAGATGGCGGCATCTTCTTCTCGAC
CircID chr15:84839702|84839906
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MVRQVEAQGCGKAARDRAELEAREGGAWG
Nucleotide Sequence CTGGTTCGCCAAGTTGAAGCGCAAGGCTGCGGCAAAGCTGCGCGAGATCGAGCAGAGCTGGAAGCACGAGAAGGCGGTGCCTGGGGA
CircID chr15:84839702|84839906
ORF Type ORF5
Protein Length 43
Nucleotide Length 129
Protein Sequence MEVGTMTEYKIHQRWFAKLKRKAAAKLREIEQSWKHEKAVPGE
Nucleotide Sequence CTGGAGGTGGGCACCATGACTGAGTACAAGATCCACCAGCGCTGGTTCGCCAAGTTGAAGCGCAAGGCTGCGGCAAAGCTGCGCGAGATCGAGCAGAGCTGGAAGCACGAGAAGGCGGTGCCTGGGGAG
CircID chr15:84839702|84839906
ORF Type ORF6
Protein Length 26
Nucleotide Length 81
Protein Sequence MPPSTRPLPRTARALCPAQGSWRWAP
Nucleotide Sequence ATGCCGCCATCTACCAGGCCTCTGCCCAGAACAGCAAGGGCATTGTGTCCTGCTCAGGGGTCCTGGAGGTGGGCACCATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab