CircRNA Information

General Information
circRNA Basic Information
CircID chr15:85723122|85723312
Strand +
CircType exon
Host Gene ENSG00000170776.18;
Algorism CIRI2;
Sequence CTTCCTGCTGCATTCTTCAGAAACACACTCCCATCACGTACAAGCTTCTTCCGTTTCAAATCTTCCTTGGCAAACATCTGACCACTCTTCATCCTCATGATTGACTTGCTATCTGTCTTTGTATAAATCTCATTGAGACGCACTTTCTTTTCATAACTTGCCACTTTGCTGTCTACAGCTCCAATCACATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:85723122|85723312 hsa-miR-17-5p 0 0 1
chr15:85723122|85723312 hsa-miR-17-3p 0 0 1
chr15:85723122|85723312 hsa-miR-20a-5p 0 0 1
chr15:85723122|85723312 hsa-miR-20a-3p 0 0 1
chr15:85723122|85723312 hsa-miR-31-5p 0 0 1
chr15:85723122|85723312 hsa-miR-31-3p 0 0 1
chr15:85723122|85723312 hsa-miR-93-5p 0 0 1
chr15:85723122|85723312 hsa-miR-93-3p 0 0 1
chr15:85723122|85723312 hsa-miR-106a-5p 0 0 1
chr15:85723122|85723312 hsa-miR-106a-3p 0 0 1
chr15:85723122|85723312 hsa-miR-107 0 0 1
chr15:85723122|85723312 hsa-miR-214-5p 0 0 1
chr15:85723122|85723312 hsa-miR-214-3p 0 0 1
chr15:85723122|85723312 hsa-miR-122-5p 0 0 1
chr15:85723122|85723312 hsa-miR-122-3p 0 0 1
chr15:85723122|85723312 hsa-miR-191-5p 0 0 1
chr15:85723122|85723312 hsa-miR-191-3p 0 0 1
chr15:85723122|85723312 hsa-miR-106b-5p 0 0 1
chr15:85723122|85723312 hsa-miR-106b-3p 0 0 1
chr15:85723122|85723312 hsa-miR-381-5p 0 0 1
chr15:85723122|85723312 hsa-miR-381-3p 0 0 1
chr15:85723122|85723312 hsa-miR-20b-5p 0 0 1
chr15:85723122|85723312 hsa-miR-20b-3p 0 0 1
chr15:85723122|85723312 hsa-miR-519d-5p 0 0 1
chr15:85723122|85723312 hsa-miR-519d-3p 0 0 1
chr15:85723122|85723312 hsa-miR-520g-5p 0 0 1
chr15:85723122|85723312 hsa-miR-520g-3p 0 0 1
chr15:85723122|85723312 hsa-miR-520h 0 0 1
chr15:85723122|85723312 hsa-miR-545-5p 0 0 1
chr15:85723122|85723312 hsa-miR-545-3p 0 0 1
chr15:85723122|85723312 hsa-miR-300 0 1 1
chr15:85723122|85723312 hsa-miR-574-5p 1 1 1
chr15:85723122|85723312 hsa-miR-509-3p 0 0 1
chr15:85723122|85723312 hsa-miR-524-5p 0 0 1
chr15:85723122|85723312 hsa-miR-520d-5p 0 0 1
chr15:85723122|85723312 hsa-miR-103 0 0 1
chr15:85723122|85723312 hsa-miR-1185 0 0 1
chr15:85723122|85723312 hsa-miR-920 1 1 0
chr15:85723122|85723312 hsa-miR-1293 1 0 0
chr15:85723122|85723312 hsa-miR-1265 1 0 0
chr15:85723122|85723312 hsa-miR-3125 1 0 0
chr15:85723122|85723312 hsa-miR-3138 1 1 0
chr15:85723122|85723312 hsa-miR-3149 0 1 0
chr15:85723122|85723312 hsa-miR-3188 1 0 0
chr15:85723122|85723312 hsa-miR-3915 1 0 0
chr15:85723122|85723312 hsa-miR-4462 1 0 0
chr15:85723122|85723312 hsa-miR-3689c 1 0 0
chr15:85723122|85723312 hsa-miR-4510 1 0 0
chr15:85723122|85723312 hsa-miR-4533 1 0 0
chr15:85723122|85723312 hsa-miR-4658 1 0 0
chr15:85723122|85723312 hsa-miR-4689 1 0 0
chr15:85723122|85723312 hsa-miR-4739 1 0 0
chr15:85723122|85723312 hsa-miR-5192 1 0 0
chr15:85723122|85723312 hsa-miR-6077 1 0 0
chr15:85723122|85723312 hsa-miR-6125 1 0 0
chr15:85723122|85723312 hsa-miR-6127 1 0 0
chr15:85723122|85723312 hsa-miR-7150 1 0 0
chr15:85723122|85723312 hsa-miR-8052 1 0 0
chr15:85723122|85723312 hsa-miR-8070 0 1 0
chr15:85723122|85723312 hsa-miR-12115 1 0 0
chr15:85723122|85723312 hsa-miR-6747-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6894-5p 1 1 0
chr15:85723122|85723312 hsa-miR-6857-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6804-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6867-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6746-5p 1 0 0
chr15:85723122|85723312 hsa-miR-4709-3p 1 1 0
chr15:85723122|85723312 hsa-miR-3605-5p 1 1 0
chr15:85723122|85723312 hsa-miR-6732-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6798-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6760-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6881-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6874-5p 0 1 0
chr15:85723122|85723312 hsa-miR-5006-5p 1 0 0
chr15:85723122|85723312 hsa-miR-485-5p 1 0 0
chr15:85723122|85723312 hsa-miR-4787-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6830-5p 0 1 0
chr15:85723122|85723312 hsa-miR-3162-5p 1 0 0
chr15:85723122|85723312 hsa-miR-550b-2-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6864-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6801-5p 1 1 0
chr15:85723122|85723312 hsa-miR-18a-5p 0 1 0
chr15:85723122|85723312 hsa-miR-4796-3p 0 1 0
chr15:85723122|85723312 hsa-miR-1207-5p 1 0 0
chr15:85723122|85723312 hsa-miR-1273h-5p 1 0 0
chr15:85723122|85723312 hsa-miR-3689b-3p 1 0 0
chr15:85723122|85723312 hsa-miR-6769b-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6778-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6865-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6752-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6803-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6842-5p 1 0 0
chr15:85723122|85723312 hsa-miR-7110-5p 1 0 0
chr15:85723122|85723312 hsa-miR-11181-3p 1 0 0
chr15:85723122|85723312 hsa-miR-1249-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6751-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6780a-5p 1 0 0
chr15:85723122|85723312 hsa-miR-4701-3p 1 0 0
chr15:85723122|85723312 hsa-miR-4745-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6858-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6883-5p 1 0 0
chr15:85723122|85723312 hsa-miR-4700-5p 1 0 0
chr15:85723122|85723312 hsa-miR-3679-5p 1 0 0
chr15:85723122|85723312 hsa-miR-4747-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6790-5p 1 0 0
chr15:85723122|85723312 hsa-miR-550a-3-5p 1 0 0
chr15:85723122|85723312 hsa-miR-550a-5p 1 0 0
chr15:85723122|85723312 hsa-miR-6718-5p 1 1 0
chr15:85723122|85723312 hsa-miR-526b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr15:85723122|85723312
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MLHSSETHSHHVQASSVSNLPWQTSDHSSSS
Nucleotide Sequence CTGCTGCATTCTTCAGAAACACACTCCCATCACGTACAAGCTTCTTCCGTTTCAAATCTTCCTTGGCAAACATCTGACCACTCTTCATCCTCATGA
CircID chr15:85723122|85723312
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MRMKSGQMFAKEDLKRKKLVRDGSVFLKNAAG
Nucleotide Sequence ATGAGGATGAAGAGTGGTCAGATGTTTGCCAAGGAAGATTTGAAACGGAAGAAGCTTGTACGTGATGGGAGTGTGTTTCTGAAGAATGCAGCAGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab