CircNet

General Information

circRNA Basic Information

CircID	chr15:88469251\|88469439
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	TGGAATTTAAGTTCTATGAGGGCAGGGCTTTTTGTCTGTTTGGTCAGGGATATATCCCCAACACTCTGAACAGTGCCTGGCATTGTTGAAGAAATGACTACAACAGAATCTTGGTTTAGATGCTTTCAGCAGCTCCTCACTGCCTTCAGTGGGGACAGCGTAAAAGCTCCAGTGTGACAGACAAGACCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr15:88469251\|88469439	hsa-miR-34a-5p	0	0	1
chr15:88469251\|88469439	hsa-miR-34a-3p	0	0	1
chr15:88469251\|88469439	hsa-miR-449a	0	1	1
chr15:88469251\|88469439	hsa-miR-376b-5p	0	0	1
chr15:88469251\|88469439	hsa-miR-376b-3p	0	0	1
chr15:88469251\|88469439	hsa-miR-558	0	0	1
chr15:88469251\|88469439	hsa-miR-632	0	0	1
chr15:88469251\|88469439	hsa-miR-449b-5p	0	0	1
chr15:88469251\|88469439	hsa-miR-449b-3p	0	0	1
chr15:88469251\|88469439	hsa-miR-421	0	0	1
chr15:88469251\|88469439	hsa-miR-708-5p	0	0	1
chr15:88469251\|88469439	hsa-miR-708-3p	0	0	1
chr15:88469251\|88469439	hsa-miR-1231	0	0	1
chr15:88469251\|88469439	hsa-miR-1208	0	1	1
chr15:88469251\|88469439	hsa-miR-1267	0	0	1
chr15:88469251\|88469439	hsa-miR-193a-5p	0	0	1
chr15:88469251\|88469439	hsa-miR-28-5p	0	0	1
chr15:88469251\|88469439	hsa-miR-188-5p	0	0	1
chr15:88469251\|88469439	hsa-miR-125a-5p	0	0	1
chr15:88469251\|88469439	hsa-miR-34c-5p	0	1	1
chr15:88469251\|88469439	hsa-miR-125b	0	0	1
chr15:88469251\|88469439	hsa-miR-376a	0	0	1
chr15:88469251\|88469439	hsa-miR-920	0	1	0
chr15:88469251\|88469439	hsa-miR-1324	0	1	0
chr15:88469251\|88469439	hsa-miR-4421	1	0	0
chr15:88469251\|88469439	hsa-miR-4689	0	1	0
chr15:88469251\|88469439	hsa-miR-93-3p	0	1	0
chr15:88469251\|88469439	hsa-miR-6857-5p	0	1	0
chr15:88469251\|88469439	hsa-miR-1233-3p	1	1	0
chr15:88469251\|88469439	hsa-miR-4695-5p	1	0	0
chr15:88469251\|88469439	hsa-miR-4755-3p	0	1	0
chr15:88469251\|88469439	hsa-miR-1226-5p	0	1	0
chr15:88469251\|88469439	hsa-miR-6757-3p	0	1	0
chr15:88469251\|88469439	hsa-miR-339-5p	1	1	0
chr15:88469251\|88469439	hsa-miR-6752-3p	0	1	0
chr15:88469251\|88469439	hsa-miR-449c-5p	0	1	0
chr15:88469251\|88469439	hsa-miR-6858-5p	0	1	0
chr15:88469251\|88469439	hsa-miR-34b-5p	0	1	0
chr15:88469251\|88469439	hsa-miR-6753-3p	1	0	0
chr15:88469251\|88469439	hsa-miR-2682-5p	0	1	0
chr15:88469251\|88469439	hsa-miR-302d-5p	0	1	0
chr15:88469251\|88469439	hsa-miR-3910	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr15:88469251\|88469439
ORF Type	ORF1
Protein Length	27
Nucleotide Length	84
Protein Sequence	MTTTESWFRCFQQLLTAFSGDSVKAPV
Nucleotide Sequence	ATGACTACAACAGAATCTTGGTTTAGATGCTTTCAGCAGCTCCTCACTGCCTTCAGTGGGGACAGCGTAAAAGCTCCAGTGTGA

CircID	chr15:88469251\|88469439
ORF Type	ORF2
Protein Length	57
Nucleotide Length	174
Protein Sequence	MSHWSFYAVPTEGSEELLKASKPRFCCSHFFNNARHCSECWGYIPDQTDKKPCPHRT
Nucleotide Sequence	CTGTCACACTGGAGCTTTTACGCTGTCCCCACTGAAGGCAGTGAGGAGCTGCTGAAAGCATCTAAACCAAGATTCTGTTGTAGTCATTTCTTCAACAATGCCAGGCACTGTTCAGAGTGTTGGGGATATATCCCTGACCAAACAGACAAAAAGCCCTGCCCTCATAGAACTTAA

CircID	chr15:88469251\|88469439
ORF Type	ORF3
Protein Length	27
Nucleotide Length	81
Protein Sequence	MPGTVQSVGDISLTKQTKSPALIELKF
Nucleotide Sequence	ATGCCAGGCACTGTTCAGAGTGTTGGGGATATATCCCTGACCAAACAGACAAAAAGCCCTGCCCTCATAGAACTTAAATTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information