CircRNA Information

General Information
circRNA Basic Information
CircID chr15:88899230|88899387
Strand +
CircType exon
Host Gene ENSG00000140545.13;
Algorism CIRI2;
Sequence CTGCCACCCCCAGGTCTTCCTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATCACCATAGGGCTGGGGACTGGGGAAGGGGAGGGTGTTCAGAGGCAGCACCACCACACAGTCACCCCTCCCTCCCTCTTTCCCACCCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:88899230|88899387 hsa-miR-134-5p 0 0 1
chr15:88899230|88899387 hsa-miR-134-3p 0 0 1
chr15:88899230|88899387 hsa-miR-583 0 0 1
chr15:88899230|88899387 hsa-miR-608 1 1 1
chr15:88899230|88899387 hsa-miR-631 0 0 1
chr15:88899230|88899387 hsa-miR-637 0 0 1
chr15:88899230|88899387 hsa-miR-892a 0 0 1
chr15:88899230|88899387 hsa-miR-943 1 0 1
chr15:88899230|88899387 hsa-miR-1253 0 0 1
chr15:88899230|88899387 hsa-miR-1321 0 1 1
chr15:88899230|88899387 hsa-miR-1827 0 0 1
chr15:88899230|88899387 hsa-miR-885-3p 1 1 1
chr15:88899230|88899387 hsa-miR-876-3p 0 0 1
chr15:88899230|88899387 hsa-miR-323-5p 0 0 1
chr15:88899230|88899387 hsa-miR-7 0 0 1
chr15:88899230|88899387 hsa-miR-644 0 0 1
chr15:88899230|88899387 hsa-miR-1300 0 0 1
chr15:88899230|88899387 hsa-miR-147 0 0 1
chr15:88899230|88899387 hsa-miR-147a 1 1 0
chr15:88899230|88899387 hsa-miR-650 1 1 0
chr15:88899230|88899387 hsa-miR-762 1 0 0
chr15:88899230|88899387 hsa-miR-665 1 1 0
chr15:88899230|88899387 hsa-miR-3153 0 1 0
chr15:88899230|88899387 hsa-miR-3196 1 0 0
chr15:88899230|88899387 hsa-miR-4270 1 0 0
chr15:88899230|88899387 hsa-miR-3621 1 0 0
chr15:88899230|88899387 hsa-miR-3661 0 1 0
chr15:88899230|88899387 hsa-miR-3921 0 1 0
chr15:88899230|88899387 hsa-miR-3689c 0 1 0
chr15:88899230|88899387 hsa-miR-4498 1 1 0
chr15:88899230|88899387 hsa-miR-4510 0 1 0
chr15:88899230|88899387 hsa-miR-3960 1 0 0
chr15:88899230|88899387 hsa-miR-3978 0 1 0
chr15:88899230|88899387 hsa-miR-4651 1 0 0
chr15:88899230|88899387 hsa-miR-4656 1 1 0
chr15:88899230|88899387 hsa-miR-4688 1 0 0
chr15:88899230|88899387 hsa-miR-4721 1 0 0
chr15:88899230|88899387 hsa-miR-4739 1 1 0
chr15:88899230|88899387 hsa-miR-4741 1 0 0
chr15:88899230|88899387 hsa-miR-5193 0 1 0
chr15:88899230|88899387 hsa-miR-5698 1 0 0
chr15:88899230|88899387 hsa-miR-5787 1 0 0
chr15:88899230|88899387 hsa-miR-6085 0 1 0
chr15:88899230|88899387 hsa-miR-6127 0 1 0
chr15:88899230|88899387 hsa-miR-6129 0 1 0
chr15:88899230|88899387 hsa-miR-6130 0 1 0
chr15:88899230|88899387 hsa-miR-6133 0 1 0
chr15:88899230|88899387 hsa-miR-6165 0 1 0
chr15:88899230|88899387 hsa-miR-7974 1 0 0
chr15:88899230|88899387 hsa-miR-8077 1 0 0
chr15:88899230|88899387 hsa-miR-146a-3p 0 1 0
chr15:88899230|88899387 hsa-miR-6765-5p 1 0 0
chr15:88899230|88899387 hsa-miR-671-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6515-5p 0 1 0
chr15:88899230|88899387 hsa-miR-7847-3p 0 1 0
chr15:88899230|88899387 hsa-miR-4695-5p 1 1 0
chr15:88899230|88899387 hsa-miR-3064-5p 1 0 0
chr15:88899230|88899387 hsa-miR-197-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6742-5p 1 0 0
chr15:88899230|88899387 hsa-miR-3180-3p 1 0 0
chr15:88899230|88899387 hsa-miR-6732-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6805-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6782-5p 1 0 0
chr15:88899230|88899387 hsa-miR-3156-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6882-3p 0 1 0
chr15:88899230|88899387 hsa-miR-5088-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6749-5p 1 0 0
chr15:88899230|88899387 hsa-miR-4787-5p 1 0 0
chr15:88899230|88899387 hsa-miR-149-3p 1 1 0
chr15:88899230|88899387 hsa-miR-574-5p 1 0 0
chr15:88899230|88899387 hsa-miR-423-5p 0 1 0
chr15:88899230|88899387 hsa-miR-2355-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6865-3p 0 1 0
chr15:88899230|88899387 hsa-miR-6734-3p 0 1 0
chr15:88899230|88899387 hsa-miR-1207-5p 1 0 0
chr15:88899230|88899387 hsa-miR-3689b-3p 0 1 0
chr15:88899230|88899387 hsa-miR-4763-3p 1 0 0
chr15:88899230|88899387 hsa-miR-6787-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6812-5p 1 0 0
chr15:88899230|88899387 hsa-miR-1343-5p 1 0 0
chr15:88899230|88899387 hsa-miR-5001-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6737-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6743-5p 1 1 0
chr15:88899230|88899387 hsa-miR-6752-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6756-5p 1 1 0
chr15:88899230|88899387 hsa-miR-6803-5p 1 1 0
chr15:88899230|88899387 hsa-miR-6813-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6842-5p 1 0 0
chr15:88899230|88899387 hsa-miR-7110-5p 0 1 0
chr15:88899230|88899387 hsa-miR-1249-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6722-3p 1 0 0
chr15:88899230|88899387 hsa-miR-6751-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6797-5p 1 1 0
chr15:88899230|88899387 hsa-miR-6808-5p 0 1 0
chr15:88899230|88899387 hsa-miR-3127-3p 0 1 0
chr15:88899230|88899387 hsa-miR-4728-5p 1 1 0
chr15:88899230|88899387 hsa-miR-5196-5p 1 0 0
chr15:88899230|88899387 hsa-miR-10526-3p 1 1 0
chr15:88899230|88899387 hsa-miR-4632-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6794-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6795-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6846-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6848-5p 1 1 0
chr15:88899230|88899387 hsa-miR-6883-5p 1 1 0
chr15:88899230|88899387 hsa-miR-6739-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6856-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6773-5p 1 1 0
chr15:88899230|88899387 hsa-miR-4646-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6766-5p 0 1 0
chr15:88899230|88899387 hsa-miR-6785-5p 1 1 0
chr15:88899230|88899387 hsa-miR-3689d 1 0 0
chr15:88899230|88899387 hsa-miR-6724-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6762-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6756-3p 0 1 0
chr15:88899230|88899387 hsa-miR-4756-5p 1 0 0
chr15:88899230|88899387 hsa-miR-6876-3p 0 1 0
chr15:88899230|88899387 hsa-miR-6820-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:88899230|88899387
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MLSMGPLPLGFSAPLNHHRAGDWGRGGCSEAAPPHSHPSLPLSHPP
Nucleotide Sequence CTGCTTTCCATGGGCCCGCTGCCTCTTGGCTTCTCAGCCCCTTTAAATCACCATAGGGCTGGGGACTGGGGAAGGGGAGGGTGTTCAGAGGCAGCACCACCACACAGTCACCCCTCCCTCCCTCTTTCCCACCCTCCA
CircID chr15:88899230|88899387
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MGTGEGEGVQRQHHHTVTPPSLFPTLH
Nucleotide Sequence CTGGGGACTGGGGAAGGGGAGGGTGTTCAGAGGCAGCACCACCACACAGTCACCCCTCCCTCCCTCTTTCCCACCCTCCAC
CircID chr15:88899230|88899387
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MPLNTLPFPSPQPYGDLKGLRSQEAAGPWKAGRPGGG
Nucleotide Sequence CTGCCTCTGAACACCCTCCCCTTCCCCAGTCCCCAGCCCTATGGTGATTTAAAGGGGCTGAGAAGCCAAGAGGCAGCGGGCCCATGGAAAGCAGGAAGACCTGGGGGTGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab