CircRNA Information

General Information
circRNA Basic Information
CircID chr15:89326991|89327225
Strand -
CircType exon
Host Gene ENSG00000140521.10;
Algorism CIRI2;
Sequence CTTCTTAGCTTTCTTCTGCTTAAATTCTTGCAGGTCCCACTCCAGGTCCCAGAGCCAGGGGTCTTCTTTGTACCTACAGAGCCAGTCCACTAGGGCAGGGCTAAGGCTAAGCCGAAGGCTAGGCCGCCCACCTGCCAGTCCCCTGCCTAGATCCTGCCCACCCAAGGCCTGGCTACCTCTCTCCTGAGAGCAGCTGGCAGGCATCATTGGCCAGATCCATCAACGACTTCTTCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:89326991|89327225 hsa-let-7b-5p 0 0 1
chr15:89326991|89327225 hsa-let-7b-3p 0 0 1
chr15:89326991|89327225 hsa-let-7c-5p 0 0 1
chr15:89326991|89327225 hsa-let-7c-3p 0 0 1
chr15:89326991|89327225 hsa-let-7d-5p 0 0 1
chr15:89326991|89327225 hsa-let-7d-3p 0 0 1
chr15:89326991|89327225 hsa-let-7e-5p 0 0 1
chr15:89326991|89327225 hsa-let-7e-3p 0 0 1
chr15:89326991|89327225 hsa-miR-98-5p 0 0 1
chr15:89326991|89327225 hsa-miR-98-3p 0 0 1
chr15:89326991|89327225 hsa-let-7g-5p 0 0 1
chr15:89326991|89327225 hsa-let-7g-3p 0 0 1
chr15:89326991|89327225 hsa-let-7i-5p 0 0 1
chr15:89326991|89327225 hsa-let-7i-3p 0 0 1
chr15:89326991|89327225 hsa-miR-122-5p 0 0 1
chr15:89326991|89327225 hsa-miR-122-3p 0 0 1
chr15:89326991|89327225 hsa-miR-149-5p 0 0 1
chr15:89326991|89327225 hsa-miR-149-3p 0 0 1
chr15:89326991|89327225 hsa-miR-185-5p 0 0 1
chr15:89326991|89327225 hsa-miR-185-3p 0 0 1
chr15:89326991|89327225 hsa-miR-326 0 1 1
chr15:89326991|89327225 hsa-miR-492 1 1 1
chr15:89326991|89327225 hsa-miR-575 0 0 1
chr15:89326991|89327225 hsa-miR-619-5p 0 0 1
chr15:89326991|89327225 hsa-miR-619-3p 0 0 1
chr15:89326991|89327225 hsa-miR-631 0 0 1
chr15:89326991|89327225 hsa-miR-645 0 0 1
chr15:89326991|89327225 hsa-miR-298 0 0 1
chr15:89326991|89327225 hsa-miR-892b 0 1 1
chr15:89326991|89327225 hsa-miR-541-5p 0 0 1
chr15:89326991|89327225 hsa-miR-541-3p 0 0 1
chr15:89326991|89327225 hsa-miR-760 1 1 1
chr15:89326991|89327225 hsa-miR-940 0 0 1
chr15:89326991|89327225 hsa-miR-1202 0 1 1
chr15:89326991|89327225 hsa-miR-1293 0 0 1
chr15:89326991|89327225 hsa-miR-1262 0 0 1
chr15:89326991|89327225 hsa-miR-1266-5p 0 0 1
chr15:89326991|89327225 hsa-miR-1266-3p 0 0 1
chr15:89326991|89327225 hsa-miR-1288-5p 0 0 1
chr15:89326991|89327225 hsa-miR-1288-3p 0 0 1
chr15:89326991|89327225 hsa-miR-1322 0 1 1
chr15:89326991|89327225 hsa-miR-654-5p 0 1 1
chr15:89326991|89327225 hsa-miR-331-3p 0 0 1
chr15:89326991|89327225 hsa-miR-524-5p 0 0 1
chr15:89326991|89327225 hsa-miR-1207-5p 1 1 1
chr15:89326991|89327225 hsa-miR-330-5p 0 1 1
chr15:89326991|89327225 hsa-miR-520d-5p 0 1 1
chr15:89326991|89327225 hsa-miR-1269 0 0 1
chr15:89326991|89327225 hsa-let-7a 0 0 1
chr15:89326991|89327225 hsa-let-7f 0 0 1
chr15:89326991|89327225 hsa-miR-129-3p 0 0 1
chr15:89326991|89327225 hsa-miR-611 1 0 0
chr15:89326991|89327225 hsa-miR-612 1 0 0
chr15:89326991|89327225 hsa-miR-762 1 0 0
chr15:89326991|89327225 hsa-miR-1183 1 0 0
chr15:89326991|89327225 hsa-miR-2861 1 1 0
chr15:89326991|89327225 hsa-miR-3138 1 0 0
chr15:89326991|89327225 hsa-miR-3141 1 0 0
chr15:89326991|89327225 hsa-miR-3185 1 1 0
chr15:89326991|89327225 hsa-miR-4298 1 0 0
chr15:89326991|89327225 hsa-miR-4314 0 1 0
chr15:89326991|89327225 hsa-miR-3649 0 1 0
chr15:89326991|89327225 hsa-miR-3661 0 1 0
chr15:89326991|89327225 hsa-miR-3665 0 1 0
chr15:89326991|89327225 hsa-miR-4498 0 1 0
chr15:89326991|89327225 hsa-miR-4507 1 0 0
chr15:89326991|89327225 hsa-miR-4515 1 1 0
chr15:89326991|89327225 hsa-miR-4533 1 0 0
chr15:89326991|89327225 hsa-miR-4535 1 0 0
chr15:89326991|89327225 hsa-miR-1587 1 0 0
chr15:89326991|89327225 hsa-miR-3972 0 1 0
chr15:89326991|89327225 hsa-miR-4648 0 1 0
chr15:89326991|89327225 hsa-miR-4651 1 0 0
chr15:89326991|89327225 hsa-miR-4654 1 1 0
chr15:89326991|89327225 hsa-miR-4673 1 0 0
chr15:89326991|89327225 hsa-miR-6127 1 0 0
chr15:89326991|89327225 hsa-miR-6860 1 0 0
chr15:89326991|89327225 hsa-miR-7150 0 1 0
chr15:89326991|89327225 hsa-miR-8052 0 1 0
chr15:89326991|89327225 hsa-miR-8057 0 1 0
chr15:89326991|89327225 hsa-miR-8085 1 0 0
chr15:89326991|89327225 hsa-miR-8089 1 0 0
chr15:89326991|89327225 hsa-miR-12115 1 0 0
chr15:89326991|89327225 hsa-miR-4433b-3p 1 0 0
chr15:89326991|89327225 hsa-miR-18a-3p 0 1 0
chr15:89326991|89327225 hsa-miR-510-5p 0 1 0
chr15:89326991|89327225 hsa-miR-6861-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6510-5p 0 1 0
chr15:89326991|89327225 hsa-miR-8071 1 0 0
chr15:89326991|89327225 hsa-miR-6746-5p 1 1 0
chr15:89326991|89327225 hsa-miR-4709-3p 1 0 0
chr15:89326991|89327225 hsa-miR-4722-5p 1 1 0
chr15:89326991|89327225 hsa-miR-4755-3p 0 1 0
chr15:89326991|89327225 hsa-miR-6741-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6727-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6759-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6721-5p 0 1 0
chr15:89326991|89327225 hsa-miR-6742-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6748-5p 1 1 0
chr15:89326991|89327225 hsa-miR-6805-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6798-5p 1 0 0
chr15:89326991|89327225 hsa-miR-4763-5p 0 1 0
chr15:89326991|89327225 hsa-miR-1229-5p 1 1 0
chr15:89326991|89327225 hsa-miR-6894-3p 0 1 0
chr15:89326991|89327225 hsa-miR-4640-5p 1 0 0
chr15:89326991|89327225 hsa-miR-1228-5p 1 1 0
chr15:89326991|89327225 hsa-miR-6771-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6749-5p 1 1 0
chr15:89326991|89327225 hsa-miR-2276-3p 0 1 0
chr15:89326991|89327225 hsa-miR-3189-3p 0 1 0
chr15:89326991|89327225 hsa-miR-7160-3p 1 0 0
chr15:89326991|89327225 hsa-let-7a-5p 0 1 0
chr15:89326991|89327225 hsa-miR-4652-5p 0 1 0
chr15:89326991|89327225 hsa-miR-6720-3p 1 0 0
chr15:89326991|89327225 hsa-miR-3614-3p 0 1 0
chr15:89326991|89327225 hsa-miR-3664-3p 0 1 0
chr15:89326991|89327225 hsa-miR-3157-3p 0 1 0
chr15:89326991|89327225 hsa-miR-1298-3p 0 1 0
chr15:89326991|89327225 hsa-miR-1233-5p 1 0 0
chr15:89326991|89327225 hsa-miR-4763-3p 1 1 0
chr15:89326991|89327225 hsa-miR-6769b-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6778-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6816-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6893-5p 0 1 0
chr15:89326991|89327225 hsa-miR-1343-5p 1 0 0
chr15:89326991|89327225 hsa-miR-5001-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6726-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6756-5p 1 1 0
chr15:89326991|89327225 hsa-miR-6769a-5p 1 0 0
chr15:89326991|89327225 hsa-miR-1249-5p 1 1 0
chr15:89326991|89327225 hsa-miR-6722-3p 1 1 0
chr15:89326991|89327225 hsa-miR-6779-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6808-5p 1 1 0
chr15:89326991|89327225 hsa-miR-6875-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6879-5p 1 0 0
chr15:89326991|89327225 hsa-miR-3620-5p 1 0 0
chr15:89326991|89327225 hsa-miR-5189-5p 1 0 0
chr15:89326991|89327225 hsa-miR-5196-5p 1 0 0
chr15:89326991|89327225 hsa-miR-1909-3p 0 1 0
chr15:89326991|89327225 hsa-miR-328-5p 1 0 0
chr15:89326991|89327225 hsa-miR-4685-5p 1 0 0
chr15:89326991|89327225 hsa-miR-4745-5p 1 1 0
chr15:89326991|89327225 hsa-miR-6794-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6846-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6848-5p 1 0 0
chr15:89326991|89327225 hsa-miR-4436b-3p 1 0 0
chr15:89326991|89327225 hsa-miR-3199 0 1 0
chr15:89326991|89327225 hsa-miR-4758-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6511a-5p 1 1 0
chr15:89326991|89327225 hsa-miR-10396b-3p 1 0 0
chr15:89326991|89327225 hsa-miR-6856-5p 0 1 0
chr15:89326991|89327225 hsa-miR-6766-5p 0 1 0
chr15:89326991|89327225 hsa-miR-6785-5p 1 0 0
chr15:89326991|89327225 hsa-miR-6791-5p 1 0 0
chr15:89326991|89327225 hsa-miR-4722-3p 0 1 0
chr15:89326991|89327225 hsa-miR-6727-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:89326991|89327225
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MLKFLQVPLQVPEPGVFFVPTEPVH
Nucleotide Sequence CTGCTTAAATTCTTGCAGGTCCCACTCCAGGTCCCAGAGCCAGGGGTCTTCTTTGTACCTACAGAGCCAGTCCACTAG
CircID chr15:89326991|89327225
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MPTQGLATSLLRAAGRHHWPDPSTTSS
Nucleotide Sequence CTGCCCACCCAAGGCCTGGCTACCTCTCTCCTGAGAGCAGCTGGCAGGCATCATTGGCCAGATCCATCAACGACTTCTTCA
CircID chr15:89326991|89327225
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MYLQSQSTRAGLRLSRRLGRPPASPLPRSCPPKAWLPLS
Nucleotide Sequence TTGTACCTACAGAGCCAGTCCACTAGGGCAGGGCTAAGGCTAAGCCGAAGGCTAGGCCGCCCACCTGCCAGTCCCCTGCCTAGATCCTGCCCACCCAAGGCCTGGCTACCTCTCTCCTGA
CircID chr15:89326991|89327225
ORF Type ORF4
Protein Length 34
Nucleotide Length 102
Protein Sequence MPVPCLDPAHPRPGYLSPESSWQASLARSINDFF
Nucleotide Sequence CTGCCAGTCCCCTGCCTAGATCCTGCCCACCCAAGGCCTGGCTACCTCTCTCCTGAGAGCAGCTGGCAGGCATCATTGGCCAGATCCATCAACGACTTCTTC
CircID chr15:89326991|89327225
ORF Type ORF5
Protein Length 69
Nucleotide Length 207
Protein Sequence MMPASCSQERGSQALGGQDLGRGLAGGRPSLRLSLSPALVDWLCRYKEDPWLWDLEWDLQEFKQKKAKK
Nucleotide Sequence ATGATGCCTGCCAGCTGCTCTCAGGAGAGAGGTAGCCAGGCCTTGGGTGGGCAGGATCTAGGCAGGGGACTGGCAGGTGGGCGGCCTAGCCTTCGGCTTAGCCTTAGCCCTGCCCTAGTGGACTGGCTCTGTAGGTACAAAGAAGACCCCTGGCTCTGGGACCTGGAGTGGGACCTGCAAGAATTTAAGCAGAAGAAAGCTAAGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab