CircRNA Information

General Information
circRNA Basic Information
CircID chr15:89333168|89333480
Strand -
CircType exon
Host Gene ENSG00000140521.10;
Algorism CIRI2;
Sequence ACCAGGGCCCGCTCCTCGGGGATGGCCACGGGTACGGCCTCCCCCTCGGGGCCGTACCGGGTCCAGCCCTCCGCCCAGGCCCAAGCCGGGGGCTTCGGGGGCAGCTGGGCCTGCAACAGCAAGTTGGCCGCCTCCAGGTAGGGCAGGCTCTGCTTCTGGGCCAGGAGGCGGAAGTGCTGGTCCAGGTTGTCCCCGTAGAGGGGCGGCAGGCGCAGCTCCACGTCGGGCAAGGGCACGGCTGGCTGCCCCCAGAGCCCGTGCTTCTGCAGGTGCTCGACGCTGCGGCGCACCGCGGCCTCGCCAGGCATCTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:89333168|89333480 hsa-miR-22-5p 0 0 1
chr15:89333168|89333480 hsa-miR-22-3p 0 0 1
chr15:89333168|89333480 hsa-miR-99a-5p 0 0 1
chr15:89333168|89333480 hsa-miR-99a-3p 0 0 1
chr15:89333168|89333480 hsa-miR-100-5p 0 0 1
chr15:89333168|89333480 hsa-miR-100-3p 0 0 1
chr15:89333168|89333480 hsa-miR-99b-5p 0 0 1
chr15:89333168|89333480 hsa-miR-99b-3p 0 0 1
chr15:89333168|89333480 hsa-miR-326 0 0 1
chr15:89333168|89333480 hsa-miR-558 0 0 1
chr15:89333168|89333480 hsa-miR-596 0 1 1
chr15:89333168|89333480 hsa-miR-619-5p 0 0 1
chr15:89333168|89333480 hsa-miR-619-3p 0 0 1
chr15:89333168|89333480 hsa-miR-634 0 1 1
chr15:89333168|89333480 hsa-miR-635 0 0 1
chr15:89333168|89333480 hsa-miR-637 1 1 1
chr15:89333168|89333480 hsa-miR-650 0 0 1
chr15:89333168|89333480 hsa-miR-661 0 1 1
chr15:89333168|89333480 hsa-miR-658 0 1 1
chr15:89333168|89333480 hsa-miR-298 1 1 1
chr15:89333168|89333480 hsa-miR-760 0 1 1
chr15:89333168|89333480 hsa-miR-938 0 0 1
chr15:89333168|89333480 hsa-miR-1204 0 0 1
chr15:89333168|89333480 hsa-miR-1291 0 0 1
chr15:89333168|89333480 hsa-miR-1281 0 0 1
chr15:89333168|89333480 hsa-miR-486-3p 0 1 1
chr15:89333168|89333480 hsa-miR-490-3p 1 1 1
chr15:89333168|89333480 hsa-miR-324-3p 0 0 1
chr15:89333168|89333480 hsa-miR-330-5p 0 0 1
chr15:89333168|89333480 hsa-miR-151-5p 0 0 1
chr15:89333168|89333480 hsa-miR-1254 0 0 1
chr15:89333168|89333480 hsa-miR-484 0 1 0
chr15:89333168|89333480 hsa-miR-636 1 0 0
chr15:89333168|89333480 hsa-miR-762 0 1 0
chr15:89333168|89333480 hsa-miR-1538 1 0 0
chr15:89333168|89333480 hsa-miR-1913 0 1 0
chr15:89333168|89333480 hsa-miR-2861 0 1 0
chr15:89333168|89333480 hsa-miR-3943 0 1 0
chr15:89333168|89333480 hsa-miR-4486 0 1 0
chr15:89333168|89333480 hsa-miR-4492 0 1 0
chr15:89333168|89333480 hsa-miR-4721 0 1 0
chr15:89333168|89333480 hsa-miR-5698 0 1 0
chr15:89333168|89333480 hsa-miR-6081 1 0 0
chr15:89333168|89333480 hsa-miR-671-5p 1 0 0
chr15:89333168|89333480 hsa-miR-25-5p 0 1 0
chr15:89333168|89333480 hsa-miR-3663-3p 0 1 0
chr15:89333168|89333480 hsa-miR-6089 1 1 0
chr15:89333168|89333480 hsa-miR-6727-5p 1 0 0
chr15:89333168|89333480 hsa-miR-874-3p 1 1 0
chr15:89333168|89333480 hsa-miR-1915-5p 1 0 0
chr15:89333168|89333480 hsa-miR-3180-3p 1 0 0
chr15:89333168|89333480 hsa-miR-2467-3p 1 0 0
chr15:89333168|89333480 hsa-miR-6810-5p 1 1 0
chr15:89333168|89333480 hsa-miR-6858-3p 1 1 0
chr15:89333168|89333480 hsa-miR-4436b-5p 1 0 0
chr15:89333168|89333480 hsa-miR-939-3p 0 1 0
chr15:89333168|89333480 hsa-miR-4763-5p 0 1 0
chr15:89333168|89333480 hsa-miR-3944-3p 1 0 0
chr15:89333168|89333480 hsa-miR-4786-3p 1 0 0
chr15:89333168|89333480 hsa-miR-1228-5p 0 1 0
chr15:89333168|89333480 hsa-miR-3648 0 1 0
chr15:89333168|89333480 hsa-miR-3690 0 1 0
chr15:89333168|89333480 hsa-miR-4446-3p 0 1 0
chr15:89333168|89333480 hsa-miR-4707-5p 0 1 0
chr15:89333168|89333480 hsa-miR-6720-3p 0 1 0
chr15:89333168|89333480 hsa-miR-1910-5p 1 0 0
chr15:89333168|89333480 hsa-miR-4746-3p 0 1 0
chr15:89333168|89333480 hsa-miR-2277-5p 1 1 0
chr15:89333168|89333480 hsa-miR-4763-3p 1 0 0
chr15:89333168|89333480 hsa-miR-6816-5p 1 0 0
chr15:89333168|89333480 hsa-miR-1343-5p 0 1 0
chr15:89333168|89333480 hsa-miR-5001-5p 0 1 0
chr15:89333168|89333480 hsa-miR-6803-5p 1 0 0
chr15:89333168|89333480 hsa-miR-6851-5p 1 0 0
chr15:89333168|89333480 hsa-miR-6774-5p 0 1 0
chr15:89333168|89333480 hsa-miR-7111-5p 0 1 0
chr15:89333168|89333480 hsa-miR-10396b-5p 0 1 0
chr15:89333168|89333480 hsa-miR-1237-5p 1 0 0
chr15:89333168|89333480 hsa-miR-4726-5p 1 0 0
chr15:89333168|89333480 hsa-miR-6846-5p 0 1 0
chr15:89333168|89333480 hsa-miR-4697-5p 1 0 0
chr15:89333168|89333480 hsa-miR-6885-5p 1 0 0
chr15:89333168|89333480 hsa-miR-6511b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr15:89333168|89333480
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MATGTASPSGPYRVQPSAQAQAGGFGGSWACNSKLAASR
Nucleotide Sequence ATGGCCACGGGTACGGCCTCCCCCTCGGGGCCGTACCGGGTCCAGCCCTCCGCCCAGGCCCAAGCCGGGGGCTTCGGGGGCAGCTGGGCCTGCAACAGCAAGTTGGCCGCCTCCAGGTAG

CircID chr15:89333168|89333480
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MAAPRARASAGARRCGAPRPRQASP
Nucleotide Sequence CTGGCTGCCCCCAGAGCCCGTGCTTCTGCAGGTGCTCGACGCTGCGGCGCACCGCGGCCTCGCCAGGCATCTCCC

CircID chr15:89333168|89333480
ORF Type ORF3
Protein Length 69
Nucleotide Length 207
Protein Sequence MGLQQQVGRLQVGQALLLGQEAEVLVQVVPVEGRQAQLHVGQGHGWLPPEPVLLQVLDAAAHRGLARHL
Nucleotide Sequence CTGGGCCTGCAACAGCAAGTTGGCCGCCTCCAGGTAGGGCAGGCTCTGCTTCTGGGCCAGGAGGCGGAAGTGCTGGTCCAGGTTGTCCCCGTAGAGGGGCGGCAGGCGCAGCTCCACGTCGGGCAAGGGCACGGCTGGCTGCCCCCAGAGCCCGTGCTTCTGCAGGTGCTCGACGCTGCGGCGCACCGCGGCCTCGCCAGGCATCTC

CircID chr15:89333168|89333480
ORF Type ORF4
Protein Length 101
Nucleotide Length 303
Protein Sequence MARPRCAAASSTCRSTGSGGSQPCPCPTWSCACRPSTGTTWTSTSASWPRSRACPTWRRPTCCCRPSCPRSPRLGPGRRAGPGTAPRGRPYPWPSPRSGPW
Nucleotide Sequence CTGGCGAGGCCGCGGTGCGCCGCAGCGTCGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCAGCCGTGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCTACGGGGACAACCTGGACCAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTTGCTGTTGCAGGCCCAGCTGCCCCCGAAGCCCCCGGCTTGGGCCTGGGCGGAGGGCTGGACCCGGTACGGCCCCGAGGGGGAGGCCGTACCCGTGGCCATCCCCGAGGAGCGGGCCCTGG

CircID chr15:89333168|89333480
ORF Type ORF5
Protein Length 84
Nucleotide Length 252
Protein Sequence MGAASRALARRGAAPAAPLRGQPGPALPPPGPEAEPALPGGGQLAVAGPAAPEAPGLGLGGGLDPVRPRGGGRTRGHPRGAGPG
Nucleotide Sequence CTGGGGGCAGCCAGCCGTGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCTACGGGGACAACCTGGACCAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTTGCTGTTGCAGGCCCAGCTGCCCCCGAAGCCCCCGGCTTGGGCCTGGGCGGAGGGCTGGACCCGGTACGGCCCCGAGGGGGAGGCCGTACCCGTGGCCATCCCCGAGGAGCGGGCCCTGGT

CircID chr15:89333168|89333480
ORF Type ORF6
Protein Length 102
Nucleotide Length 306
Protein Sequence MPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQAQLPPKPPAWAWAEGWTRYGPEGEAVPVAIPEERAL
Nucleotide Sequence ATGCCTGGCGAGGCCGCGGTGCGCCGCAGCGTCGAGCACCTGCAGAAGCACGGGCTCTGGGGGCAGCCAGCCGTGCCCTTGCCCGACGTGGAGCTGCGCCTGCCGCCCCTCTACGGGGACAACCTGGACCAGCACTTCCGCCTCCTGGCCCAGAAGCAGAGCCTGCCCTACCTGGAGGCGGCCAACTTGCTGTTGCAGGCCCAGCTGCCCCCGAAGCCCCCGGCTTGGGCCTGGGCGGAGGGCTGGACCCGGTACGGCCCCGAGGGGGAGGCCGTACCCGTGGCCATCCCCGAGGAGCGGGCCCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites