CircNet

General Information

circRNA Basic Information

CircID	chr15:89888521\|89889140
Strand	-
CircType	exon
Host Gene	ENSG00000250021.7;ENSG00000157823.16;
Algorism	find_circ;CIRI2;CIRC
Sequence	CCAGAAGAAATTCAACAGCAGATTGTTCGAGAGACTTTCCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGGTAAACTGTCAGCTTCATTTTTCTCCCCATATATCCACTTGTGAGTGGCCTTCATTATTGCATCTTCTGACAGTACTCAAGTGTCAGGTGGGTACTTGATGCAACTTTAGCTGGTCTCACCATGATCTGCTCAGGGAGAGACACAATTCTCTTTGGGGCGCAGTTCAATTATTGTGCTTCTGATATTGCTCATTTAGATGATTGATCCCCGGGAGGATAGGCAGGAGAAGAGGTGAGGTAAGGTGGCTTTAGGTACCTCTGCCAAACTTGGTTGCCATTCACCTAGTAAGAATGGCCTGCTTCTAGCGTTTGGCCTTCTCCTTTCCAGTGGGTCCTTTCTCATTCTTTGGCACAAGGTTTCTTTTTGATGTGTTTAATTAAGCTGTGGGCATTTAAATGTTTCCCATCTTCTGCAGTTTGATTGGTGGCTCTGACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGATTCCTCAGAGAGTGAACTTGGAATCTTGGACCTCATCCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr15:89888521\|89889140	hsa-miR-375-5p	0	0	1
chr15:89888521\|89889140	hsa-miR-375-3p	0	0	1
chr15:89888521\|89889140	hsa-miR-345-5p	0	0	1
chr15:89888521\|89889140	hsa-miR-345-3p	0	0	1
chr15:89888521\|89889140	hsa-miR-492	0	0	1
chr15:89888521\|89889140	hsa-miR-432-5p	0	0	1
chr15:89888521\|89889140	hsa-miR-432-3p	0	0	1
chr15:89888521\|89889140	hsa-miR-554	0	0	1
chr15:89888521\|89889140	hsa-miR-587	0	0	1
chr15:89888521\|89889140	hsa-miR-599	0	0	1
chr15:89888521\|89889140	hsa-miR-421	0	0	1
chr15:89888521\|89889140	hsa-miR-890	0	0	1
chr15:89888521\|89889140	hsa-miR-760	0	0	1
chr15:89888521\|89889140	hsa-miR-922	0	0	1
chr15:89888521\|89889140	hsa-miR-1283	0	0	1
chr15:89888521\|89889140	hsa-miR-509-3p	0	1	1
chr15:89888521\|89889140	hsa-miR-644	0	0	1
chr15:89888521\|89889140	hsa-miR-768-5p	0	0	1
chr15:89888521\|89889140	hsa-miR-147	0	0	1
chr15:89888521\|89889140	hsa-miR-549	0	0	1
chr15:89888521\|89889140	hsa-miR-147a	0	1	0
chr15:89888521\|89889140	hsa-miR-608	1	0	0
chr15:89888521\|89889140	hsa-miR-638	1	0	0
chr15:89888521\|89889140	hsa-miR-644a	1	0	0
chr15:89888521\|89889140	hsa-miR-1291	1	0	0
chr15:89888521\|89889140	hsa-miR-3911	1	1	0
chr15:89888521\|89889140	hsa-miR-3937	1	0	0
chr15:89888521\|89889140	hsa-miR-378e	1	0	0
chr15:89888521\|89889140	hsa-miR-4752	0	1	0
chr15:89888521\|89889140	hsa-miR-5192	1	0	0
chr15:89888521\|89889140	hsa-miR-6133	1	0	0
chr15:89888521\|89889140	hsa-miR-6745	1	1	0
chr15:89888521\|89889140	hsa-miR-8057	0	1	0
chr15:89888521\|89889140	hsa-miR-3194-3p	1	0	0
chr15:89888521\|89889140	hsa-miR-6765-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6894-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6822-3p	1	0	0
chr15:89888521\|89889140	hsa-miR-486-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6515-5p	1	1	0
chr15:89888521\|89889140	hsa-miR-6732-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6782-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-4787-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6752-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6756-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6803-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-1249-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6751-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6797-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-6883-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-3940-5p	1	0	0
chr15:89888521\|89889140	hsa-miR-514b-5p	0	1	0
chr15:89888521\|89889140	hsa-miR-301a-5p	0	1	0
chr15:89888521\|89889140	hsa-miR-301b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr15:89888521\|89889140
ORF Type	ORF1
Protein Length	50
Nucleotide Length	150
Protein Sequence	MRKDPLERRRPNARSRPFLLGEWQPSLAEVPKATLPHLFSCLSSRGSII*
Nucleotide Sequence	ATGAGAAAGGACCCACTGGAAAGGAGAAGGCCAAACGCTAGAAGCAGGCCATTCTTACTAGGTGAATGGCAACCAAGTTTGGCAGAGGTACCTAAAGCCACCTTACCTCACCTCTTCTCCTGCCTATCCTCCCGGGGATCAATCATCTAA

CircID	chr15:89888521\|89889140
ORF Type	ORF2
Protein Length	44
Nucleotide Length	132
Protein Sequence	MFPIFCSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQ
Nucleotide Sequence	ATGTTTCCCATCTTCTGCAGTTTGATTGGTGGCTCTGACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGATTCCTCAGAGAGTGAACTTGGAATCTTGGACCTCATCCAG

CircID	chr15:89888521\|89889140
ORF Type	ORF3
Protein Length	37
Nucleotide Length	111
Protein Sequence	MGRKMKLTVYLPPSKKLQMLSSRLRTRWKVSRTICC*
Nucleotide Sequence	ATGGGGAGAAAAATGAAGCTGACAGTTTACCTTCCACCCTCCAAGAAGTTACAGATGTTGTCATCCCGCTTGAGGACTAGATGGAAAGTCTCTCGAACAATCTGCTGTTGA

CircID	chr15:89888521\|89889140
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MKATHKWIYGEKNEADSLPSTLQEVTDVVIPLED*
Nucleotide Sequence	ATGAAGGCCACTCACAAGTGGATATATGGGGAGAAAAATGAAGCTGACAGTTTACCTTCCACCCTCCAAGAAGTTACAGATGTTGTCATCCCGCTTGAGGACTAG

CircID	chr15:89888521\|89889140
ORF Type	ORF1
Protein Length	42
Nucleotide Length	126
Protein Sequence	MEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQ
Nucleotide Sequence	TTGGAGGGTGGAAGTTTGATTGGTGGCTCTGACTACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGATTCCTCAGAGAGTGAACTTGGAATCTTGGACCTCATCCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr15:89888521\|89889140	U2AF2	16	3	7
chr15:89888521\|89889140	MOV10	0	0	1
chr15:89888521\|89889140	ELAVL1	8	3	1
chr15:89888521\|89889140	DHX9	1	0	0
chr15:89888521\|89889140	SF3B4	2	0	0
chr15:89888521\|89889140	SF3B1	2	0	0
chr15:89888521\|89889140	PRPF8	1	6	2
chr15:89888521\|89889140	UPF1	0	1	0
chr15:89888521\|89889140	TAF15	0	1	0
chr15:89888521\|89889140	FMR1	0	1	1
chr15:89888521\|89889140	CPSF6	1	1	1
chr15:89888521\|89889140	NUDT21	0	1	0
chr15:89888521\|89889140	CPSF1	1	0	0
chr15:89888521\|89889140	FUS	0	1	0
chr15:89888521\|89889140	GNL3	0	0	1
chr15:89888521\|89889140	DGCR8	0	1	1
chr15:89888521\|89889140	CPSF7	0	4	0
chr15:89888521\|89889140	SRSF1	0	4	4
chr15:89888521\|89889140	NOP58	2	0	2
chr15:89888521\|89889140	U2AF1	0	1	2
chr15:89888521\|89889140	NOP56	3	2	1
chr15:89888521\|89889140	SRSF9	0	2	2
chr15:89888521\|89889140	DDX54	0	0	3
chr15:89888521\|89889140	LSM11	0	1	0
chr15:89888521\|89889140	TROVE2	1	0	0
chr15:89888521\|89889140	SF3A3	2	0	0
chr15:89888521\|89889140	FIP1L1	1	0	0
chr15:89888521\|89889140	PTBP1	12	0	0
chr15:89888521\|89889140	HNRNPC	7	8	0
chr15:89888521\|89889140	HNRNPD	1	0	0
chr15:89888521\|89889140	TRA2A	1	0	0
chr15:89888521\|89889140	HNRNPM	0	2	0
chr15:89888521\|89889140	ZNF184	0	0	1
chr15:89888521\|89889140	HNRNPA1	4	5	0
chr15:89888521\|89889140	DDX3X	1	0	1
chr15:89888521\|89889140	ZC3H7B	0	2	0
chr15:89888521\|89889140	LARP4B	0	0	1
chr15:89888521\|89889140	SMNDC1	1	1	0
chr15:89888521\|89889140	ACIN1	0	0	3
chr15:89888521\|89889140	LIN28B	0	3	4
chr15:89888521\|89889140	QKI	0	1	0
chr15:89888521\|89889140	RBM22	0	2	0
chr15:89888521\|89889140	SND1	0	1	1
chr15:89888521\|89889140	IGF2BP2	6	2	1
chr15:89888521\|89889140	HNRNPUL1	0	1	0
chr15:89888521\|89889140	TARDBP	0	1	0
chr15:89888521\|89889140	BUD13	2	2	3
chr15:89888521\|89889140	KHSRP	0	1	0
chr15:89888521\|89889140	DDX42	0	0	1
chr15:89888521\|89889140	RBFOX2	0	1	0
chr15:89888521\|89889140	RNF219	1	0	0
chr15:89888521\|89889140	XRN2	0	0	1
chr15:89888521\|89889140	FBL	2	1	2
chr15:89888521\|89889140	EIF4A3	2	3	6
chr15:89888521\|89889140	AGO2	0	0	2

CircRNA Information