CircRNA Information

General Information
circRNA Basic Information
CircID chr15:90087132|90087484
Strand -
CircType exon
Host Gene ENSG00000182054.8;
Algorism CIRI2;
Sequence TGCACATCTCCGTCATAGTTCTTGCAGGCCCACACAAAGCCACCCGAAGACTTGAGGACCTGAGCCACCATGTCATCAATGAGCCGGTGCTCATACCAGATCTTATTCTTGTCGAAGTCGGTCTTATAGTGCCTGGGAGTAAAAAGGTCTGTTATGGGGAGAGGGCAGAAGGCTGACAGGTTGGGGATCCCTCCCTGAGCCTCGGAGCTGAGCCAAATGCACTCTAATAGCGACCTTCCCAGGGTAGGATGGGAACAGCATGGGGGGAAGGGAAGAAAGGCCACAGAGTACATGGATGAGGCTTTACTTGTCAAAGATCTCCTGGAAGATGTCCTTGAAACGCCCATCGTAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:90087132|90087484 hsa-miR-10a-5p 0 0 1
chr15:90087132|90087484 hsa-miR-10a-3p 0 0 1
chr15:90087132|90087484 hsa-miR-10b-5p 0 0 1
chr15:90087132|90087484 hsa-miR-10b-3p 0 0 1
chr15:90087132|90087484 hsa-miR-204-5p 0 0 1
chr15:90087132|90087484 hsa-miR-204-3p 0 0 1
chr15:90087132|90087484 hsa-miR-211-5p 0 0 1
chr15:90087132|90087484 hsa-miR-211-3p 0 0 1
chr15:90087132|90087484 hsa-miR-493-5p 0 0 1
chr15:90087132|90087484 hsa-miR-493-3p 0 0 1
chr15:90087132|90087484 hsa-miR-498-5p 0 0 1
chr15:90087132|90087484 hsa-miR-498-3p 0 0 1
chr15:90087132|90087484 hsa-miR-585-5p 0 0 1
chr15:90087132|90087484 hsa-miR-585-3p 0 0 1
chr15:90087132|90087484 hsa-miR-599 0 0 1
chr15:90087132|90087484 hsa-miR-623 0 0 1
chr15:90087132|90087484 hsa-miR-649 0 0 1
chr15:90087132|90087484 hsa-miR-1264 0 0 1
chr15:90087132|90087484 hsa-miR-665 0 0 1
chr15:90087132|90087484 hsa-miR-1237-5p 0 0 1
chr15:90087132|90087484 hsa-miR-1237-3p 0 0 1
chr15:90087132|90087484 hsa-miR-663b 0 0 1
chr15:90087132|90087484 hsa-miR-1266-5p 0 0 1
chr15:90087132|90087484 hsa-miR-1266-3p 0 0 1
chr15:90087132|90087484 hsa-miR-1321 0 0 1
chr15:90087132|90087484 hsa-miR-576-3p 0 0 1
chr15:90087132|90087484 hsa-miR-556-5p 0 0 1
chr15:90087132|90087484 hsa-miR-324-3p 0 0 1
chr15:90087132|90087484 hsa-miR-644 0 0 1
chr15:90087132|90087484 hsa-miR-1268 0 0 1
chr15:90087132|90087484 hsa-miR-514 0 0 1
chr15:90087132|90087484 hsa-miR-24 0 0 1
chr15:90087132|90087484 hsa-miR-147 0 0 1
chr15:90087132|90087484 hsa-miR-1293 1 0 0
chr15:90087132|90087484 hsa-miR-3188 1 0 0
chr15:90087132|90087484 hsa-miR-3909 1 0 0
chr15:90087132|90087484 hsa-miR-4441 0 1 0
chr15:90087132|90087484 hsa-miR-4518 0 1 0
chr15:90087132|90087484 hsa-miR-4527 0 1 0
chr15:90087132|90087484 hsa-miR-4673 1 1 0
chr15:90087132|90087484 hsa-miR-5572 1 0 0
chr15:90087132|90087484 hsa-miR-5705 1 0 0
chr15:90087132|90087484 hsa-miR-7703 1 0 0
chr15:90087132|90087484 hsa-miR-9900 1 1 0
chr15:90087132|90087484 hsa-miR-141-5p 0 1 0
chr15:90087132|90087484 hsa-miR-6749-3p 1 0 0
chr15:90087132|90087484 hsa-miR-1247-3p 1 0 0
chr15:90087132|90087484 hsa-miR-4726-3p 1 0 0
chr15:90087132|90087484 hsa-miR-6892-3p 0 1 0
chr15:90087132|90087484 hsa-miR-4768-3p 0 1 0
chr15:90087132|90087484 hsa-miR-4722-5p 0 1 0
chr15:90087132|90087484 hsa-miR-24-3p 0 1 0
chr15:90087132|90087484 hsa-miR-6840-5p 1 0 0
chr15:90087132|90087484 hsa-miR-3622b-5p 1 1 0
chr15:90087132|90087484 hsa-miR-3189-5p 0 1 0
chr15:90087132|90087484 hsa-miR-4728-3p 1 0 0
chr15:90087132|90087484 hsa-miR-6787-3p 0 1 0
chr15:90087132|90087484 hsa-miR-6845-3p 1 0 0
chr15:90087132|90087484 hsa-miR-659-3p 1 0 0
chr15:90087132|90087484 hsa-miR-6796-5p 1 0 0
chr15:90087132|90087484 hsa-miR-2467-5p 1 0 0
chr15:90087132|90087484 hsa-miR-3156-5p 0 1 0
chr15:90087132|90087484 hsa-miR-3934-3p 0 1 0
chr15:90087132|90087484 hsa-miR-7109-3p 1 1 0
chr15:90087132|90087484 hsa-miR-1226-5p 1 0 0
chr15:90087132|90087484 hsa-miR-6784-5p 1 0 0
chr15:90087132|90087484 hsa-miR-7161-3p 0 1 0
chr15:90087132|90087484 hsa-miR-3679-3p 0 1 0
chr15:90087132|90087484 hsa-miR-6771-5p 1 0 0
chr15:90087132|90087484 hsa-miR-6749-5p 1 0 0
chr15:90087132|90087484 hsa-miR-6809-3p 0 1 0
chr15:90087132|90087484 hsa-miR-6830-3p 1 1 0
chr15:90087132|90087484 hsa-miR-149-3p 0 1 0
chr15:90087132|90087484 hsa-miR-2276-3p 0 1 0
chr15:90087132|90087484 hsa-miR-654-5p 1 0 0
chr15:90087132|90087484 hsa-miR-6720-3p 1 0 0
chr15:90087132|90087484 hsa-miR-6793-3p 0 1 0
chr15:90087132|90087484 hsa-miR-4774-5p 0 1 0
chr15:90087132|90087484 hsa-miR-6826-3p 1 0 0
chr15:90087132|90087484 hsa-miR-6738-3p 0 1 0
chr15:90087132|90087484 hsa-miR-4649-3p 1 0 0
chr15:90087132|90087484 hsa-miR-6880-3p 1 1 0
chr15:90087132|90087484 hsa-miR-3124-3p 0 1 0
chr15:90087132|90087484 hsa-miR-6734-3p 0 1 0
chr15:90087132|90087484 hsa-miR-550b-3p 1 0 0
chr15:90087132|90087484 hsa-miR-4716-5p 1 0 0
chr15:90087132|90087484 hsa-miR-6756-5p 1 0 0
chr15:90087132|90087484 hsa-miR-6819-5p 1 0 0
chr15:90087132|90087484 hsa-miR-6883-5p 0 1 0
chr15:90087132|90087484 hsa-miR-6511b-5p 1 0 0
chr15:90087132|90087484 hsa-miR-4646-5p 0 1 0
chr15:90087132|90087484 hsa-miR-6724-5p 1 0 0
chr15:90087132|90087484 hsa-miR-6805-3p 1 0 0
chr15:90087132|90087484 hsa-miR-6823-3p 1 0 0
chr15:90087132|90087484 hsa-miR-4756-5p 0 1 0
chr15:90087132|90087484 hsa-miR-5006-3p 0 1 0
chr15:90087132|90087484 hsa-miR-6715b-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:90087132|90087484
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MSQMHSNSDLPRVGWEQHGGKGRKATEYMDEALLVKDLLEDVLETPIV
Nucleotide Sequence CTGAGCCAAATGCACTCTAATAGCGACCTTCCCAGGGTAGGATGGGAACAGCATGGGGGGAAGGGAAGAAAGGCCACAGAGTACATGGATGAGGCTTTACTTGTCAAAGATCTCCTGGAAGATGTCCTTGAAACGCCCATCGTA
CircID chr15:90087132|90087484
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MGGREERPQSTWMRLYLSKISWKMSLKRPS
Nucleotide Sequence ATGGGGGGAAGGGAAGAAAGGCCACAGAGTACATGGATGAGGCTTTACTTGTCAAAGATCTCCTGGAAGATGTCCTTGAAACGCCCATCGTAG
CircID chr15:90087132|90087484
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MSHHVINEPVLIPDLILVEVGLIVPGSKKVCYGERAEG
Nucleotide Sequence CTGAGCCACCATGTCATCAATGAGCCGGTGCTCATACCAGATCTTATTCTTGTCGAAGTCGGTCTTATAGTGCCTGGGAGTAAAAAGGTCTGTTATGGGGAGAGGGCAGAAGGCTGA
CircID chr15:90087132|90087484
ORF Type ORF4
Protein Length 115
Nucleotide Length 345
Protein Sequence MGVSRTSSRRSLTSKASSMYSVAFLPFPPCCSHPTLGRSLLECIWLSSEAQGGIPNLSAFCPLPITDLFTPRHYKTDFDKNKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDV
Nucleotide Sequence ATGGGCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAAGTAAAGCCTCATCCATGTACTCTGTGGCCTTTCTTCCCTTCCCCCCATGCTGTTCCCATCCTACCCTGGGAAGGTCGCTATTAGAGTGCATTTGGCTCAGCTCCGAGGCTCAGGGAGGGATCCCCAACCTGTCAGCCTTCTGCCCTCTCCCCATAACAGACCTTTTTACTCCCAGGCACTATAAGACCGACTTCGACAAGAATAAGATCTGGTATGAGCACCGGCTCATTGATGACATGGTGGCTCAGGTCCTCAAGTCTTCGGGTGGCTTTGTGTGGGCCTGCAAGAACTATGACGGAGATGTG
CircID chr15:90087132|90087484
ORF Type ORF5
Protein Length 31
Nucleotide Length 93
Protein Sequence MSTGSLMTWWLRSSSLRVALCGPARTMTEMC
Nucleotide Sequence ATGAGCACCGGCTCATTGATGACATGGTGGCTCAGGTCCTCAAGTCTTCGGGTGGCTTTGTGTGGGCCTGCAAGAACTATGACGGAGATGTGC
CircID chr15:90087132|90087484
ORF Type ORF6
Protein Length 45
Nucleotide Length 138
Protein Sequence MLFPSYPGKVAIRVHLAQLRGSGRDPQPVSLLPSPHNRPFYSQAL
Nucleotide Sequence ATGCTGTTCCCATCCTACCCTGGGAAGGTCGCTATTAGAGTGCATTTGGCTCAGCTCCGAGGCTCAGGGAGGGATCCCCAACCTGTCAGCCTTCTGCCCTCTCCCCATAACAGACCTTTTTACTCCCAGGCACTATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab