CircRNA Information

General Information
circRNA Basic Information
CircID chr15:90087159|90087512
Strand +
CircType exon
Host Gene ENSG00000182054.8;
Algorism CIRI2;
Sequence ATGAGCACCAAGAACACCATACTGAAAGCCTACGATGGGCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAAGTAAAGCCTCATCCATGTACTCTGTGGCCTTTCTTCCCTTCCCCCCATGCTGTTCCCATCCTACCCTGGGAAGGTCGCTATTAGAGTGCATTTGGCTCAGCTCCGAGGCTCAGGGAGGGATCCCCAACCTGTCAGCCTTCTGCCCTCTCCCCATAACAGACCTTTTTACTCCCAGGCACTATAAGACCGACTTCGACAAGAATAAGATCTGGTATGAGCACCGGCTCATTGATGACATGGTGGCTCAGGTCCTCAAGTCTTCGGGTGGCTTTGTGTGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:90087159|90087512 hsa-miR-492 0 0 1
chr15:90087159|90087512 hsa-miR-519e-5p 0 0 1
chr15:90087159|90087512 hsa-miR-519e-3p 0 0 1
chr15:90087159|90087512 hsa-miR-578 0 0 1
chr15:90087159|90087512 hsa-miR-625-5p 0 0 1
chr15:90087159|90087512 hsa-miR-625-3p 0 0 1
chr15:90087159|90087512 hsa-miR-661 1 1 1
chr15:90087159|90087512 hsa-miR-298 1 1 1
chr15:90087159|90087512 hsa-miR-939-5p 0 0 1
chr15:90087159|90087512 hsa-miR-939-3p 0 0 1
chr15:90087159|90087512 hsa-miR-1250-5p 0 0 1
chr15:90087159|90087512 hsa-miR-1250-3p 0 0 1
chr15:90087159|90087512 hsa-miR-1255a 0 0 1
chr15:90087159|90087512 hsa-miR-1265 0 0 1
chr15:90087159|90087512 hsa-miR-1292-5p 0 0 1
chr15:90087159|90087512 hsa-miR-1292-3p 0 0 1
chr15:90087159|90087512 hsa-miR-1224-5p 0 0 1
chr15:90087159|90087512 hsa-miR-485-5p 0 0 1
chr15:90087159|90087512 hsa-miR-490-5p 0 0 1
chr15:90087159|90087512 hsa-miR-125a-5p 0 1 1
chr15:90087159|90087512 hsa-miR-515-3p 0 0 1
chr15:90087159|90087512 hsa-miR-105 0 0 1
chr15:90087159|90087512 hsa-miR-125b 0 0 1
chr15:90087159|90087512 hsa-miR-550 0 0 1
chr15:90087159|90087512 hsa-miR-1255b 0 0 1
chr15:90087159|90087512 hsa-miR-7 0 0 1
chr15:90087159|90087512 hsa-miR-1254 0 0 1
chr15:90087159|90087512 hsa-miR-371-3p 0 0 1
chr15:90087159|90087512 hsa-miR-610 0 1 0
chr15:90087159|90087512 hsa-miR-637 1 0 0
chr15:90087159|90087512 hsa-miR-762 1 0 0
chr15:90087159|90087512 hsa-miR-665 1 0 0
chr15:90087159|90087512 hsa-miR-1182 1 0 0
chr15:90087159|90087512 hsa-miR-1183 1 0 0
chr15:90087159|90087512 hsa-miR-1200 0 1 0
chr15:90087159|90087512 hsa-miR-2110 1 0 0
chr15:90087159|90087512 hsa-miR-2861 1 0 0
chr15:90087159|90087512 hsa-miR-3132 1 0 0
chr15:90087159|90087512 hsa-miR-3138 1 0 0
chr15:90087159|90087512 hsa-miR-3141 1 0 0
chr15:90087159|90087512 hsa-miR-3175 0 1 0
chr15:90087159|90087512 hsa-miR-4298 1 0 0
chr15:90087159|90087512 hsa-miR-4270 1 0 0
chr15:90087159|90087512 hsa-miR-4271 0 1 0
chr15:90087159|90087512 hsa-miR-3655 1 1 0
chr15:90087159|90087512 hsa-miR-3660 0 1 0
chr15:90087159|90087512 hsa-miR-3907 0 1 0
chr15:90087159|90087512 hsa-miR-2392 1 1 0
chr15:90087159|90087512 hsa-miR-4507 1 0 0
chr15:90087159|90087512 hsa-miR-1587 1 0 0
chr15:90087159|90087512 hsa-miR-4654 1 0 0
chr15:90087159|90087512 hsa-miR-4663 0 1 0
chr15:90087159|90087512 hsa-miR-4669 1 0 0
chr15:90087159|90087512 hsa-miR-4751 1 1 0
chr15:90087159|90087512 hsa-miR-4754 1 0 0
chr15:90087159|90087512 hsa-miR-6090 1 0 0
chr15:90087159|90087512 hsa-miR-6124 1 0 0
chr15:90087159|90087512 hsa-miR-7515 0 1 0
chr15:90087159|90087512 hsa-miR-7703 0 1 0
chr15:90087159|90087512 hsa-miR-8052 1 0 0
chr15:90087159|90087512 hsa-miR-8085 1 0 0
chr15:90087159|90087512 hsa-miR-8089 1 0 0
chr15:90087159|90087512 hsa-miR-9500 0 1 0
chr15:90087159|90087512 hsa-miR-12122 0 1 0
chr15:90087159|90087512 hsa-miR-12126 0 1 0
chr15:90087159|90087512 hsa-miR-92a-1-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6765-5p 1 0 0
chr15:90087159|90087512 hsa-miR-125b-1-3p 1 0 0
chr15:90087159|90087512 hsa-miR-124-5p 0 1 0
chr15:90087159|90087512 hsa-miR-3150a-3p 0 1 0
chr15:90087159|90087512 hsa-miR-6861-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6894-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6728-5p 1 0 0
chr15:90087159|90087512 hsa-miR-1236-5p 1 0 0
chr15:90087159|90087512 hsa-miR-7851-3p 1 0 0
chr15:90087159|90087512 hsa-miR-6089 1 0 0
chr15:90087159|90087512 hsa-miR-6757-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4695-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4722-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6730-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4753-5p 0 1 0
chr15:90087159|90087512 hsa-miR-6890-5p 1 0 0
chr15:90087159|90087512 hsa-miR-3622b-5p 1 0 0
chr15:90087159|90087512 hsa-miR-197-5p 1 0 0
chr15:90087159|90087512 hsa-miR-432-5p 1 0 0
chr15:90087159|90087512 hsa-miR-7845-5p 1 0 0
chr15:90087159|90087512 hsa-miR-3605-5p 1 0 0
chr15:90087159|90087512 hsa-miR-491-5p 1 1 0
chr15:90087159|90087512 hsa-miR-6871-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6796-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6760-5p 0 1 0
chr15:90087159|90087512 hsa-miR-6881-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6810-5p 1 0 0
chr15:90087159|90087512 hsa-miR-5006-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6835-5p 1 1 0
chr15:90087159|90087512 hsa-miR-7109-5p 0 1 0
chr15:90087159|90087512 hsa-miR-1226-5p 1 1 0
chr15:90087159|90087512 hsa-miR-204-3p 1 0 0
chr15:90087159|90087512 hsa-miR-1229-5p 1 0 0
chr15:90087159|90087512 hsa-miR-7113-3p 0 1 0
chr15:90087159|90087512 hsa-miR-296-3p 1 0 0
chr15:90087159|90087512 hsa-miR-6823-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4671-5p 0 1 0
chr15:90087159|90087512 hsa-miR-92b-5p 1 0 0
chr15:90087159|90087512 hsa-miR-3202 0 1 0
chr15:90087159|90087512 hsa-miR-3160-3p 0 1 0
chr15:90087159|90087512 hsa-miR-149-3p 1 1 0
chr15:90087159|90087512 hsa-miR-6824-5p 1 0 0
chr15:90087159|90087512 hsa-miR-3162-5p 1 0 0
chr15:90087159|90087512 hsa-miR-550b-2-5p 1 1 0
chr15:90087159|90087512 hsa-miR-6878-5p 1 0 0
chr15:90087159|90087512 hsa-miR-5010-5p 1 0 0
chr15:90087159|90087512 hsa-miR-493-5p 0 1 0
chr15:90087159|90087512 hsa-miR-6768-3p 0 1 0
chr15:90087159|90087512 hsa-miR-4717-5p 1 1 0
chr15:90087159|90087512 hsa-miR-3675-5p 0 1 0
chr15:90087159|90087512 hsa-miR-4802-3p 0 1 0
chr15:90087159|90087512 hsa-miR-1233-5p 1 0 0
chr15:90087159|90087512 hsa-miR-1273h-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6778-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6787-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6812-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6756-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6803-5p 1 0 0
chr15:90087159|90087512 hsa-miR-7107-5p 1 0 0
chr15:90087159|90087512 hsa-miR-10401-5p 1 0 0
chr15:90087159|90087512 hsa-miR-1249-5p 0 1 0
chr15:90087159|90087512 hsa-miR-6751-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6763-5p 1 1 0
chr15:90087159|90087512 hsa-miR-6779-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6780a-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6797-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6879-5p 1 1 0
chr15:90087159|90087512 hsa-miR-7111-5p 1 1 0
chr15:90087159|90087512 hsa-miR-3620-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4728-5p 1 1 0
chr15:90087159|90087512 hsa-miR-5196-5p 1 1 0
chr15:90087159|90087512 hsa-miR-6780b-5p 1 1 0
chr15:90087159|90087512 hsa-miR-328-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4649-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4685-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4725-3p 1 0 0
chr15:90087159|90087512 hsa-miR-6729-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6735-5p 1 1 0
chr15:90087159|90087512 hsa-miR-6777-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6794-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6795-5p 1 1 0
chr15:90087159|90087512 hsa-miR-6883-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6887-5p 1 1 0
chr15:90087159|90087512 hsa-miR-6889-5p 1 0 0
chr15:90087159|90087512 hsa-miR-4436b-3p 0 1 0
chr15:90087159|90087512 hsa-miR-4769-5p 1 1 0
chr15:90087159|90087512 hsa-miR-6511a-5p 1 0 0
chr15:90087159|90087512 hsa-miR-3940-5p 1 0 0
chr15:90087159|90087512 hsa-miR-1199-5p 0 1 0
chr15:90087159|90087512 hsa-miR-4646-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6750-5p 1 0 0
chr15:90087159|90087512 hsa-miR-6766-5p 1 0 0
chr15:90087159|90087512 hsa-miR-550a-3-5p 1 1 0
chr15:90087159|90087512 hsa-miR-550a-5p 1 1 0
chr15:90087159|90087512 hsa-miR-9851-5p 0 1 0
chr15:90087159|90087512 hsa-miR-6751-3p 0 1 0
chr15:90087159|90087512 hsa-miR-33b-3p 0 1 0
chr15:90087159|90087512 hsa-miR-6764-5p 0 1 0
chr15:90087159|90087512 hsa-miR-3622b-3p 0 1 0
chr15:90087159|90087512 hsa-miR-125b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr15:90087159|90087512
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MSTKNTILKAYDGRFKDIFQEIFDK
Nucleotide Sequence ATGAGCACCAAGAACACCATACTGAAAGCCTACGATGGGCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAAGTAA
CircID chr15:90087159|90087512
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MLFPSYPGKVAIRVHLAQLRGSGRDPQPVSLLPSPHNRPFYSQAL
Nucleotide Sequence ATGCTGTTCCCATCCTACCCTGGGAAGGTCGCTATTAGAGTGCATTTGGCTCAGCTCCGAGGCTCAGGGAGGGATCCCCAACCTGTCAGCCTTCTGCCCTCTCCCCATAACAGACCTTTTTACTCCCAGGCACTATAA
CircID chr15:90087159|90087512
ORF Type ORF3
Protein Length 106
Nucleotide Length 318
Protein Sequence MGVSRTSSRRSLTSKASSMYSVAFLPFPPCCSHPTLGRSLLECIWLSSEAQGGIPNLSAFCPLPITDLFTPRHYKTDFDKNKIWYEHRLIDDMVAQVLKSSGGFVW
Nucleotide Sequence ATGGGCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAAGTAAAGCCTCATCCATGTACTCTGTGGCCTTTCTTCCCTTCCCCCCATGCTGTTCCCATCCTACCCTGGGAAGGTCGCTATTAGAGTGCATTTGGCTCAGCTCCGAGGCTCAGGGAGGGATCCCCAACCTGTCAGCCTTCTGCCCTCTCCCCATAACAGACCTTTTTACTCCCAGGCACTATAAGACCGACTTCGACAAGAATAAGATCTGGTATGAGCACCGGCTCATTGATGACATGGTGGCTCAGGTCCTCAAGTCTTCGGGTGGCTTTGTGTGG
CircID chr15:90087159|90087512
ORF Type ORF4
Protein Length 58
Nucleotide Length 174
Protein Sequence MSQMHSNSDLPRVGWEQHGGKGRKATEYMDEALLVKDLLEDVLETPIVGFQYGVLGAH
Nucleotide Sequence CTGAGCCAAATGCACTCTAATAGCGACCTTCCCAGGGTAGGATGGGAACAGCATGGGGGGAAGGGAAGAAAGGCCACAGAGTACATGGATGAGGCTTTACTTGTCAAAGATCTCCTGGAAGATGTCCTTGAAACGCCCATCGTAGGCTTTCAGTATGGTGTTCTTGGTGCTCAT
CircID chr15:90087159|90087512
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MGGREERPQSTWMRLYLSKISWKMSLKRPS
Nucleotide Sequence ATGGGGGGAAGGGAAGAAAGGCCACAGAGTACATGGATGAGGCTTTACTTGTCAAAGATCTCCTGGAAGATGTCCTTGAAACGCCCATCGTAG
CircID chr15:90087159|90087512
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MSHHVINEPVLIPDLILVEVGLIVPGSKKVCYGERAEG
Nucleotide Sequence CTGAGCCACCATGTCATCAATGAGCCGGTGCTCATACCAGATCTTATTCTTGTCGAAGTCGGTCTTATAGTGCCTGGGAGTAAAAAGGTCTGTTATGGGGAGAGGGCAGAAGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab