CircRNA Information

General Information
circRNA Basic Information
CircID chr15:90229014|90229197
Strand +
CircType exon
Host Gene ENSG00000185033.13;
Algorism CIRI2;
Sequence GGCAGCAACAACTACATCCTCGGCTGACTGGCAAGGCAGAACGCACGCAGCCCAAGCTGGTCCTGAATCTGCAGTGAGACAGGGCAGCCGGTGGCAGCGGGATAATGTGGAAGGTGAAGAGGCCAGTTGGTGAGGGTTTCCAACTCTGTCTCAGACAACCACTTTGGATGCATCCCCAGCACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:90229014|90229197 hsa-miR-412-5p 0 0 1
chr15:90229014|90229197 hsa-miR-412-3p 0 0 1
chr15:90229014|90229197 hsa-miR-193b-5p 0 0 1
chr15:90229014|90229197 hsa-miR-193b-3p 0 0 1
chr15:90229014|90229197 hsa-miR-520g-5p 0 0 1
chr15:90229014|90229197 hsa-miR-520g-3p 0 0 1
chr15:90229014|90229197 hsa-miR-520h 0 0 1
chr15:90229014|90229197 hsa-miR-571 0 0 1
chr15:90229014|90229197 hsa-miR-604 0 0 1
chr15:90229014|90229197 hsa-miR-632 0 0 1
chr15:90229014|90229197 hsa-miR-635 0 0 1
chr15:90229014|90229197 hsa-miR-874-5p 0 0 1
chr15:90229014|90229197 hsa-miR-874-3p 0 0 1
chr15:90229014|90229197 hsa-miR-1231 0 0 1
chr15:90229014|90229197 hsa-miR-1202 1 0 1
chr15:90229014|90229197 hsa-miR-1265 0 1 1
chr15:90229014|90229197 hsa-miR-140-5p 0 0 1
chr15:90229014|90229197 hsa-miR-324-5p 0 0 1
chr15:90229014|90229197 hsa-miR-146b-3p 0 0 1
chr15:90229014|90229197 hsa-miR-339-5p 0 1 1
chr15:90229014|90229197 hsa-miR-509-3-5p 0 1 1
chr15:90229014|90229197 hsa-miR-509-5p 0 1 1
chr15:90229014|90229197 hsa-miR-193a-3p 0 0 1
chr15:90229014|90229197 hsa-miR-453 0 0 1
chr15:90229014|90229197 hsa-miR-622 1 0 0
chr15:90229014|90229197 hsa-miR-639 1 0 0
chr15:90229014|90229197 hsa-miR-762 1 0 0
chr15:90229014|90229197 hsa-miR-4418 0 1 0
chr15:90229014|90229197 hsa-miR-4453 0 1 0
chr15:90229014|90229197 hsa-miR-1587 0 1 0
chr15:90229014|90229197 hsa-miR-4741 1 0 0
chr15:90229014|90229197 hsa-miR-6079 0 1 0
chr15:90229014|90229197 hsa-miR-103a-2-5p 1 0 0
chr15:90229014|90229197 hsa-miR-4731-5p 0 1 0
chr15:90229014|90229197 hsa-miR-1915-5p 0 1 0
chr15:90229014|90229197 hsa-miR-877-3p 1 1 0
chr15:90229014|90229197 hsa-miR-6815-3p 1 0 0
chr15:90229014|90229197 hsa-miR-5001-3p 0 1 0
chr15:90229014|90229197 hsa-miR-6878-3p 1 1 0
chr15:90229014|90229197 hsa-miR-6501-5p 0 1 0
chr15:90229014|90229197 hsa-miR-1304-3p 0 1 0
chr15:90229014|90229197 hsa-miR-6837-3p 1 0 0
chr15:90229014|90229197 hsa-miR-4703-3p 0 1 0
chr15:90229014|90229197 hsa-miR-1229-3p 1 1 0
chr15:90229014|90229197 hsa-miR-6515-3p 0 1 0
chr15:90229014|90229197 hsa-miR-4520-5p 0 1 0
chr15:90229014|90229197 hsa-miR-6752-5p 1 0 0
chr15:90229014|90229197 hsa-miR-6754-3p 1 1 0
chr15:90229014|90229197 hsa-miR-4700-5p 0 1 0
chr15:90229014|90229197 hsa-miR-2682-3p 1 1 0
chr15:90229014|90229197 hsa-miR-7107-3p 1 0 0
chr15:90229014|90229197 hsa-miR-6893-3p 0 1 0
chr15:90229014|90229197 hsa-miR-4757-5p 1 1 0
chr15:90229014|90229197 hsa-miR-6511a-3p 0 1 0
chr15:90229014|90229197 hsa-miR-10401-3p 1 0 0
chr15:90229014|90229197 hsa-miR-6511b-3p 0 1 0
chr15:90229014|90229197 hsa-miR-6744-3p 1 1 0
chr15:90229014|90229197 hsa-miR-323b-5p 0 1 0
chr15:90229014|90229197 hsa-miR-6781-3p 1 1 0
chr15:90229014|90229197 hsa-miR-103a-1-5p 1 0 0
chr15:90229014|90229197 hsa-miR-410-5p 0 1 0
chr15:90229014|90229197 hsa-miR-1912-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr15:90229014|90229197
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MWKVKRPVGEGFQLCLRQPLWMHPQH
Nucleotide Sequence ATGTGGAAGGTGAAGAGGCCAGTTGGTGAGGGTTTCCAACTCTGTCTCAGACAACCACTTTGGATGCATCCCCAGCAC

CircID chr15:90229014|90229197
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MRQSWKPSPTGLFTFHIIPLPPAALSHCRFRTSLGCVRSALPVSRGCSCCC
Nucleotide Sequence CTGAGACAGAGTTGGAAACCCTCACCAACTGGCCTCTTCACCTTCCACATTATCCCGCTGCCACCGGCTGCCCTGTCTCACTGCAGATTCAGGACCAGCTTGGGCTGCGTGCGTTCTGCCTTGCCAGTCAGCCGAGGATGTAGTTGTTGCTGC

CircID chr15:90229014|90229197
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MASSPSTLSRCHRLPCLTADSGPAWAACVLPCQSAEDVVVAA
Nucleotide Sequence CTGGCCTCTTCACCTTCCACATTATCCCGCTGCCACCGGCTGCCCTGTCTCACTGCAGATTCAGGACCAGCTTGGGCTGCGTGCGTTCTGCCTTGCCAGTCAGCCGAGGATGTAGTTGTTGCTGCC

CircID chr15:90229014|90229197
ORF Type ORF4
Protein Length 55
Nucleotide Length 168
Protein Sequence MGMHPKWLSETELETLTNWPLHLPHYPAATGCPVSLQIQDQLGLRAFCLASQPRM
Nucleotide Sequence CTGGGGATGCATCCAAAGTGGTTGTCTGAGACAGAGTTGGAAACCCTCACCAACTGGCCTCTTCACCTTCCACATTATCCCGCTGCCACCGGCTGCCCTGTCTCACTGCAGATTCAGGACCAGCTTGGGCTGCGTGCGTTCTGCCTTGCCAGTCAGCCGAGGATGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites