CircRNA Information

General Information
circRNA Basic Information
CircID chr15:90879716|90879970
Strand -
CircType exon
Host Gene ENSG00000140564.9;
Algorism CIRI2;
Sequence CTCGAAGCCAGCCCACCTCAATGCCAACGACTGGGCCACCAATGGTGTGGGCCGGAAAGGTGAGGGCAGGCTGGCCCGGCAGGCTGGATGTGGAGTTAGGTAGAAGGCACTCTGTGCCTGACAGCTGACCCTACCTTCCCTGTCCCCACAGTGAGCCACTCATATGGCTACGGGCTTTTGGACGCAGGCGCCATGGTGGCCCTGGCCCAGAATTGGACCACAGTGGCCCCCCAGCGGAAGTGCATCATCGACATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:90879716|90879970 hsa-miR-519e-5p 0 0 1
chr15:90879716|90879970 hsa-miR-519e-3p 0 0 1
chr15:90879716|90879970 hsa-miR-572 0 0 1
chr15:90879716|90879970 hsa-miR-596 0 1 1
chr15:90879716|90879970 hsa-miR-612 0 0 1
chr15:90879716|90879970 hsa-miR-637 0 0 1
chr15:90879716|90879970 hsa-miR-652-5p 0 0 1
chr15:90879716|90879970 hsa-miR-652-3p 0 0 1
chr15:90879716|90879970 hsa-miR-541-5p 0 0 1
chr15:90879716|90879970 hsa-miR-541-3p 0 0 1
chr15:90879716|90879970 hsa-miR-1180-5p 0 0 1
chr15:90879716|90879970 hsa-miR-1180-3p 0 0 1
chr15:90879716|90879970 hsa-miR-1182 0 0 1
chr15:90879716|90879970 hsa-miR-663b 1 1 1
chr15:90879716|90879970 hsa-miR-1208 0 0 1
chr15:90879716|90879970 hsa-miR-1256 0 0 1
chr15:90879716|90879970 hsa-miR-1306-5p 0 0 1
chr15:90879716|90879970 hsa-miR-1306-3p 0 0 1
chr15:90879716|90879970 hsa-miR-1322 0 0 1
chr15:90879716|90879970 hsa-miR-491-5p 0 0 1
chr15:90879716|90879970 hsa-miR-654-5p 0 0 1
chr15:90879716|90879970 hsa-miR-566 0 0 1
chr15:90879716|90879970 hsa-miR-1207-3p 0 0 1
chr15:90879716|90879970 hsa-miR-515-3p 0 1 1
chr15:90879716|90879970 hsa-miR-1285 0 0 1
chr15:90879716|90879970 hsa-miR-24 0 0 1
chr15:90879716|90879970 hsa-miR-346 0 1 0
chr15:90879716|90879970 hsa-miR-759 0 1 0
chr15:90879716|90879970 hsa-miR-4318 0 1 0
chr15:90879716|90879970 hsa-miR-4269 0 1 0
chr15:90879716|90879970 hsa-miR-3918 0 1 0
chr15:90879716|90879970 hsa-miR-4488 1 0 0
chr15:90879716|90879970 hsa-miR-6075 1 1 0
chr15:90879716|90879970 hsa-miR-8089 1 1 0
chr15:90879716|90879970 hsa-miR-370-3p 1 0 0
chr15:90879716|90879970 hsa-miR-6749-3p 1 0 0
chr15:90879716|90879970 hsa-miR-4731-5p 1 1 0
chr15:90879716|90879970 hsa-miR-6825-5p 0 1 0
chr15:90879716|90879970 hsa-miR-6720-5p 0 1 0
chr15:90879716|90879970 hsa-miR-1178-5p 0 1 0
chr15:90879716|90879970 hsa-miR-6849-3p 0 1 0
chr15:90879716|90879970 hsa-miR-7845-5p 1 1 0
chr15:90879716|90879970 hsa-miR-6796-5p 0 1 0
chr15:90879716|90879970 hsa-miR-6810-5p 1 1 0
chr15:90879716|90879970 hsa-miR-6884-3p 0 1 0
chr15:90879716|90879970 hsa-miR-4763-5p 0 1 0
chr15:90879716|90879970 hsa-miR-1909-5p 1 0 0
chr15:90879716|90879970 hsa-miR-4640-5p 1 1 0
chr15:90879716|90879970 hsa-miR-767-5p 0 1 0
chr15:90879716|90879970 hsa-miR-6781-5p 1 0 0
chr15:90879716|90879970 hsa-miR-6720-3p 0 1 0
chr15:90879716|90879970 hsa-miR-6738-3p 0 1 0
chr15:90879716|90879970 hsa-miR-181c-5p 0 1 0
chr15:90879716|90879970 hsa-miR-4797-5p 0 1 0
chr15:90879716|90879970 hsa-miR-5586-5p 0 1 0
chr15:90879716|90879970 hsa-miR-6803-5p 1 0 0
chr15:90879716|90879970 hsa-miR-6751-5p 1 0 0
chr15:90879716|90879970 hsa-miR-6879-5p 1 1 0
chr15:90879716|90879970 hsa-miR-4728-5p 0 1 0
chr15:90879716|90879970 hsa-miR-6836-5p 1 0 0
chr15:90879716|90879970 hsa-miR-1237-5p 1 0 0
chr15:90879716|90879970 hsa-miR-328-5p 1 1 0
chr15:90879716|90879970 hsa-miR-4685-5p 0 1 0
chr15:90879716|90879970 hsa-miR-4726-5p 1 1 0
chr15:90879716|90879970 hsa-miR-6848-5p 1 0 0
chr15:90879716|90879970 hsa-miR-6885-5p 1 1 0
chr15:90879716|90879970 hsa-miR-4758-5p 0 1 0
chr15:90879716|90879970 hsa-miR-4747-5p 0 1 0
chr15:90879716|90879970 hsa-miR-6791-5p 1 0 0
chr15:90879716|90879970 hsa-miR-6762-5p 1 1 0
chr15:90879716|90879970 hsa-miR-10401-3p 1 1 0
chr15:90879716|90879970 hsa-miR-6837-5p 0 1 0
chr15:90879716|90879970 hsa-miR-6715b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr15:90879716|90879970
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MCLTADPTFPVPTVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDI
Nucleotide Sequence CTGTGCCTGACAGCTGACCCTACCTTCCCTGTCCCCACAGTGAGCCACTCATATGGCTACGGGCTTTTGGACGCAGGCGCCATGGTGGCCCTGGCCCAGAATTGGACCACAGTGGCCCCCCAGCGGAAGTGCATCATCGACATC

CircID chr15:90879716|90879970
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MATGFWTQAPWWPWPRIGPQWPPSGSASST
Nucleotide Sequence ATGGCTACGGGCTTTTGGACGCAGGCGCCATGGTGGCCCTGGCCCAGAATTGGACCACAGTGGCCCCCCAGCGGAAGTGCATCATCGACA

CircID chr15:90879716|90879970
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MPTTGPPMVWAGKVRAGWPGRLDVELGRRHSVPDS
Nucleotide Sequence ATGCCAACGACTGGGCCACCAATGGTGTGGGCCGGAAAGGTGAGGGCAGGCTGGCCCGGCAGGCTGGATGTGGAGTTAGGTAGAAGGCACTCTGTGCCTGACAGCTGA

CircID chr15:90879716|90879970
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MSMMHFRWGATVVQFWARATMAPASKSP
Nucleotide Sequence ATGTCGATGATGCACTTCCGCTGGGGGGCCACTGTGGTCCAATTCTGGGCCAGGGCCACCATGGCGCCTGCGTCCAAAAGCCCGTAG

CircID chr15:90879716|90879970
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MWSNSGPGPPWRLRPKARSHMSGSLWGQGR
Nucleotide Sequence CTGTGGTCCAATTCTGGGCCAGGGCCACCATGGCGCCTGCGTCCAAAAGCCCGTAGCCATATGAGTGGCTCACTGTGGGGACAGGGAAGGTAG

CircID chr15:90879716|90879970
ORF Type ORF6
Protein Length 41
Nucleotide Length 123
Protein Sequence MSGTECLLPNSTSSLPGQPALTFPAHTIGGPVVGIEVGWLR
Nucleotide Sequence CTGTCAGGCACAGAGTGCCTTCTACCTAACTCCACATCCAGCCTGCCGGGCCAGCCTGCCCTCACCTTTCCGGCCCACACCATTGGTGGCCCAGTCGTTGGCATTGAGGTGGGCTGGCTTCGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites