CircRNA Information

General Information
circRNA Basic Information
CircID chr15:90893799|90893958
Strand +
CircType exon
Host Gene ENSG00000182511.10;
Algorism CIRI2;
Sequence GTCGCTTTCGGAGGAGTAGCGGCCTGCAGAGGAGGCGAGGAGGTGAGGCAGCGTGAGTGCACCCTCCCTGGGGCCAGGGCGAGGCAGCCGGCAGGACCCAGGCCTGGCCTCTGGCCATGGAGTCCAGGGTAGACAGGGACTAGGTACCGTAGTTAAGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:90893799|90893958 hsa-miR-10a-5p 0 0 1
chr15:90893799|90893958 hsa-miR-10a-3p 0 0 1
chr15:90893799|90893958 hsa-miR-10b-5p 0 0 1
chr15:90893799|90893958 hsa-miR-10b-3p 0 0 1
chr15:90893799|90893958 hsa-miR-422a 0 1 1
chr15:90893799|90893958 hsa-miR-554 0 1 1
chr15:90893799|90893958 hsa-miR-606 0 0 1
chr15:90893799|90893958 hsa-miR-661 1 1 1
chr15:90893799|90893958 hsa-miR-934 0 0 1
chr15:90893799|90893958 hsa-miR-938 0 1 1
chr15:90893799|90893958 hsa-miR-1205 0 0 1
chr15:90893799|90893958 hsa-miR-1249-5p 0 0 1
chr15:90893799|90893958 hsa-miR-1249-3p 0 0 1
chr15:90893799|90893958 hsa-miR-1281 0 1 1
chr15:90893799|90893958 hsa-miR-1321 0 0 1
chr15:90893799|90893958 hsa-miR-339-5p 0 1 1
chr15:90893799|90893958 hsa-miR-1184 0 0 1
chr15:90893799|90893958 hsa-miR-1274a 0 0 1
chr15:90893799|90893958 hsa-miR-1274b 0 0 1
chr15:90893799|90893958 hsa-miR-378 0 0 1
chr15:90893799|90893958 hsa-miR-762 1 0 0
chr15:90893799|90893958 hsa-miR-1538 1 0 0
chr15:90893799|90893958 hsa-miR-378b 0 1 0
chr15:90893799|90893958 hsa-miR-378c 0 1 0
chr15:90893799|90893958 hsa-miR-378f 0 1 0
chr15:90893799|90893958 hsa-miR-378h 0 1 0
chr15:90893799|90893958 hsa-miR-378i 0 1 0
chr15:90893799|90893958 hsa-miR-4734 1 0 0
chr15:90893799|90893958 hsa-miR-4780 1 0 0
chr15:90893799|90893958 hsa-miR-5193 0 1 0
chr15:90893799|90893958 hsa-miR-6069 1 0 0
chr15:90893799|90893958 hsa-miR-7703 1 1 0
chr15:90893799|90893958 hsa-miR-4435 0 1 0
chr15:90893799|90893958 hsa-miR-6747-3p 0 1 0
chr15:90893799|90893958 hsa-miR-6861-5p 1 0 0
chr15:90893799|90893958 hsa-miR-6762-3p 1 1 0
chr15:90893799|90893958 hsa-miR-874-3p 1 1 0
chr15:90893799|90893958 hsa-miR-4728-3p 1 0 0
chr15:90893799|90893958 hsa-miR-6726-3p 0 1 0
chr15:90893799|90893958 hsa-miR-1915-5p 1 1 0
chr15:90893799|90893958 hsa-miR-6728-3p 1 0 0
chr15:90893799|90893958 hsa-miR-6882-3p 1 1 0
chr15:90893799|90893958 hsa-miR-6803-3p 1 0 0
chr15:90893799|90893958 hsa-miR-5001-3p 0 1 0
chr15:90893799|90893958 hsa-miR-3690 0 1 0
chr15:90893799|90893958 hsa-miR-6742-3p 0 1 0
chr15:90893799|90893958 hsa-miR-1224-3p 1 1 0
chr15:90893799|90893958 hsa-miR-3670 1 0 0
chr15:90893799|90893958 hsa-miR-3177-5p 1 0 0
chr15:90893799|90893958 hsa-miR-6754-5p 0 1 0
chr15:90893799|90893958 hsa-miR-3127-3p 1 0 0
chr15:90893799|90893958 hsa-miR-6754-3p 0 1 0
chr15:90893799|90893958 hsa-miR-6883-5p 0 1 0
chr15:90893799|90893958 hsa-miR-378a-3p 0 1 0
chr15:90893799|90893958 hsa-miR-10401-3p 0 1 0
chr15:90893799|90893958 hsa-miR-6829-3p 1 1 0
chr15:90893799|90893958 hsa-miR-6891-3p 0 1 0
chr15:90893799|90893958 hsa-miR-4756-5p 0 1 0
chr15:90893799|90893958 hsa-miR-10394-5p 0 1 0
chr15:90893799|90893958 hsa-miR-6781-3p 0 1 0
chr15:90893799|90893958 hsa-miR-5699-3p 0 1 0
chr15:90893799|90893958 hsa-miR-378d 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr15:90893799|90893958
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MGPGRGSRQDPGLASGHGVQGRQGLGTVVKG
Nucleotide Sequence CTGGGGCCAGGGCGAGGCAGCCGGCAGGACCCAGGCCTGGCCTCTGGCCATGGAGTCCAGGGTAGACAGGGACTAGGTACCGTAGTTAAGGGC

CircID chr15:90893799|90893958
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MSTLDSMARGQAWVLPAASPWPQGGCTHAASPPRLLCRPLLLRKR
Nucleotide Sequence CTGTCTACCCTGGACTCCATGGCCAGAGGCCAGGCCTGGGTCCTGCCGGCTGCCTCGCCCTGGCCCCAGGGAGGGTGCACTCACGCTGCCTCACCTCCTCGCCTCCTCTGCAGGCCGCTACTCCTCCGAAAGCGA

CircID chr15:90893799|90893958
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MPRPGPREGALTLPHLLASSAGRYSSESD
Nucleotide Sequence CTGCCTCGCCCTGGCCCCAGGGAGGGTGCACTCACGCTGCCTCACCTCCTCGCCTCCTCTGCAGGCCGCTACTCCTCCGAAAGCGAC

CircID chr15:90893799|90893958
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MGPAGCLALAPGRVHSRCLTSSPPLQAATPPKA
Nucleotide Sequence CTGGGTCCTGCCGGCTGCCTCGCCCTGGCCCCAGGGAGGGTGCACTCACGCTGCCTCACCTCCTCGCCTCCTCTGCAGGCCGCTACTCCTCCGAAAGCG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites