CircRNA Information

General Information
circRNA Basic Information
CircID chr15:90918209|90918358
Strand -
CircType exon
Host Gene ENSG00000196547.13;
Algorism CIRI2;
Sequence TCTACCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:90918209|90918358 hsa-miR-34a-5p 0 0 1
chr15:90918209|90918358 hsa-miR-34a-3p 0 0 1
chr15:90918209|90918358 hsa-miR-224-5p 0 0 1
chr15:90918209|90918358 hsa-miR-224-3p 0 0 1
chr15:90918209|90918358 hsa-miR-379-5p 0 0 1
chr15:90918209|90918358 hsa-miR-379-3p 0 0 1
chr15:90918209|90918358 hsa-miR-449a 0 0 1
chr15:90918209|90918358 hsa-miR-558 0 0 1
chr15:90918209|90918358 hsa-miR-661 0 0 1
chr15:90918209|90918358 hsa-miR-449b-5p 0 0 1
chr15:90918209|90918358 hsa-miR-449b-3p 0 0 1
chr15:90918209|90918358 hsa-miR-920 0 0 1
chr15:90918209|90918358 hsa-miR-671-5p 1 0 1
chr15:90918209|90918358 hsa-miR-125a-3p 1 0 1
chr15:90918209|90918358 hsa-miR-324-5p 0 0 1
chr15:90918209|90918358 hsa-miR-339-3p 0 0 1
chr15:90918209|90918358 hsa-miR-513a-5p 0 0 1
chr15:90918209|90918358 hsa-miR-34c-5p 0 0 1
chr15:90918209|90918358 hsa-miR-220c 0 0 1
chr15:90918209|90918358 hsa-miR-203 0 0 1
chr15:90918209|90918358 hsa-miR-663a 1 0 0
chr15:90918209|90918358 hsa-miR-658 1 0 0
chr15:90918209|90918358 hsa-miR-762 1 0 0
chr15:90918209|90918358 hsa-miR-921 1 0 0
chr15:90918209|90918358 hsa-miR-1268a 1 0 0
chr15:90918209|90918358 hsa-miR-3125 1 0 0
chr15:90918209|90918358 hsa-miR-3132 1 0 0
chr15:90918209|90918358 hsa-miR-3137 1 0 0
chr15:90918209|90918358 hsa-miR-3141 1 0 0
chr15:90918209|90918358 hsa-miR-3195 1 0 0
chr15:90918209|90918358 hsa-miR-3196 1 0 0
chr15:90918209|90918358 hsa-miR-3937 1 0 0
chr15:90918209|90918358 hsa-miR-1268b 1 0 0
chr15:90918209|90918358 hsa-miR-4449 1 0 0
chr15:90918209|90918358 hsa-miR-4478 1 0 0
chr15:90918209|90918358 hsa-miR-4505 1 0 0
chr15:90918209|90918358 hsa-miR-4510 1 0 0
chr15:90918209|90918358 hsa-miR-4651 1 0 0
chr15:90918209|90918358 hsa-miR-4656 1 0 0
chr15:90918209|90918358 hsa-miR-4673 1 0 0
chr15:90918209|90918358 hsa-miR-4688 1 0 0
chr15:90918209|90918358 hsa-miR-4689 1 0 0
chr15:90918209|90918358 hsa-miR-4692 1 0 0
chr15:90918209|90918358 hsa-miR-4706 1 0 0
chr15:90918209|90918358 hsa-miR-4710 1 0 0
chr15:90918209|90918358 hsa-miR-4739 1 0 0
chr15:90918209|90918358 hsa-miR-4784 1 0 0
chr15:90918209|90918358 hsa-miR-5093 1 0 0
chr15:90918209|90918358 hsa-miR-5787 1 0 0
chr15:90918209|90918358 hsa-miR-6090 1 0 0
chr15:90918209|90918358 hsa-miR-6127 1 0 0
chr15:90918209|90918358 hsa-miR-6133 1 0 0
chr15:90918209|90918358 hsa-miR-6860 1 0 0
chr15:90918209|90918358 hsa-miR-8072 1 0 0
chr15:90918209|90918358 hsa-miR-8073 1 0 0
chr15:90918209|90918358 hsa-miR-8089 1 0 0
chr15:90918209|90918358 hsa-miR-1843 1 0 0
chr15:90918209|90918358 hsa-miR-6734-5p 1 0 0
chr15:90918209|90918358 hsa-miR-504-3p 1 0 0
chr15:90918209|90918358 hsa-miR-6765-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6825-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6894-5p 1 0 0
chr15:90918209|90918358 hsa-miR-766-5p 1 0 0
chr15:90918209|90918358 hsa-miR-3622a-5p 1 0 0
chr15:90918209|90918358 hsa-miR-7114-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6089 1 0 0
chr15:90918209|90918358 hsa-miR-6880-5p 1 0 0
chr15:90918209|90918358 hsa-miR-7847-3p 1 0 0
chr15:90918209|90918358 hsa-miR-4695-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4709-3p 1 0 0
chr15:90918209|90918358 hsa-miR-7154-3p 1 0 0
chr15:90918209|90918358 hsa-miR-7160-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6727-5p 1 0 0
chr15:90918209|90918358 hsa-miR-197-5p 1 0 0
chr15:90918209|90918358 hsa-miR-8069 1 0 0
chr15:90918209|90918358 hsa-miR-3605-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6871-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6827-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6798-5p 1 0 0
chr15:90918209|90918358 hsa-miR-1224-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6881-5p 1 0 0
chr15:90918209|90918358 hsa-miR-5006-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6786-5p 1 0 0
chr15:90918209|90918358 hsa-miR-1226-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4793-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4786-3p 1 0 0
chr15:90918209|90918358 hsa-miR-1229-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6784-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4640-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6771-5p 1 0 0
chr15:90918209|90918358 hsa-miR-877-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6749-5p 1 0 0
chr15:90918209|90918358 hsa-miR-149-3p 1 0 0
chr15:90918209|90918358 hsa-miR-6824-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6789-5p 1 0 0
chr15:90918209|90918358 hsa-miR-7112-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6832-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4750-5p 1 0 0
chr15:90918209|90918358 hsa-miR-490-5p 1 0 0
chr15:90918209|90918358 hsa-miR-1207-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4763-3p 1 0 0
chr15:90918209|90918358 hsa-miR-6769b-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6787-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6816-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6865-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6775-5p 1 0 0
chr15:90918209|90918358 hsa-miR-1343-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6726-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6743-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6752-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6754-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6756-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6803-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6815-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6851-5p 1 0 0
chr15:90918209|90918358 hsa-miR-1249-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6722-3p 1 0 0
chr15:90918209|90918358 hsa-miR-6751-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6763-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6779-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6780a-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6797-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6879-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4728-5p 1 0 0
chr15:90918209|90918358 hsa-miR-5196-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6836-5p 1 0 0
chr15:90918209|90918358 hsa-miR-1909-3p 1 0 0
chr15:90918209|90918358 hsa-miR-328-5p 1 0 0
chr15:90918209|90918358 hsa-miR-449c-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4649-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4685-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4745-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6729-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6735-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6777-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6795-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6846-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6848-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6858-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6883-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6831-5p 1 0 0
chr15:90918209|90918358 hsa-miR-939-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4758-5p 1 0 0
chr15:90918209|90918358 hsa-miR-1266-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6511a-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6511b-5p 1 0 0
chr15:90918209|90918358 hsa-miR-7843-5p 1 0 0
chr15:90918209|90918358 hsa-miR-4665-5p 1 0 0
chr15:90918209|90918358 hsa-miR-3679-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6891-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6785-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6791-5p 1 0 0
chr15:90918209|90918358 hsa-miR-6884-5p 1 0 0
chr15:90918209|90918358 hsa-miR-10394-5p 1 0 0
chr15:90918209|90918358 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:90918209|90918358
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MTSMYLNAPALALPVARMQLPGPGLRSFHPLASSLPCDFH
Nucleotide Sequence CTGACCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTCCAC
CircID chr15:90918209|90918358
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MHPGYRQSERRGVQVHGGQVAEEGWVAGR
Nucleotide Sequence CTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGTCAGGTGGCTGAGGAGGGATGGGTAGCTGGTAGA
CircID chr15:90918209|90918358
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MSADQGLGAASWLQAERAPGRSGTWRSGG
Nucleotide Sequence ATGAGCGCAGACCAGGGCCTGGGAGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGTCAGGTGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab