CircRNA Information

General Information
circRNA Basic Information
CircID chr15:92618605|92618924
Strand -
CircType exon
Host Gene ENSG00000185442.11;
Algorism CIRI2;
Sequence GTAGAACTGTGACAGAGCAGAGGAACAACAAAAAAGCACAAAGAATGTTGCTAATCACAGGCTGCCTAGCACTTTCCTTTCCCTTCAGAGAAGGAGAAACTGTTTTATAGGTATCACACACGTGCACACGCACACACGTGCACACACACACACACACACACGCACAGTTTTTCCCTGATACTGGAAATTCTTTGTGAACTAGCCACGCTGATTTCTGCTGAACCTTTTTTTTTTTTAAAAAAAAAAAAAAAGGAAGAAAGAAAAGGAGCCACAGACGTGTCCAGGTCTGGAAGGGGCTGACCAGCTCTAAGCACATCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:92618605|92618924 hsa-miR-17-5p 0 0 1
chr15:92618605|92618924 hsa-miR-17-3p 0 0 1
chr15:92618605|92618924 hsa-miR-20a-5p 0 0 1
chr15:92618605|92618924 hsa-miR-20a-3p 0 0 1
chr15:92618605|92618924 hsa-miR-27a-5p 0 0 1
chr15:92618605|92618924 hsa-miR-27a-3p 0 0 1
chr15:92618605|92618924 hsa-miR-93-5p 0 0 1
chr15:92618605|92618924 hsa-miR-93-3p 0 0 1
chr15:92618605|92618924 hsa-miR-106a-5p 0 0 1
chr15:92618605|92618924 hsa-miR-106a-3p 0 0 1
chr15:92618605|92618924 hsa-miR-210-5p 0 0 1
chr15:92618605|92618924 hsa-miR-210-3p 0 0 1
chr15:92618605|92618924 hsa-miR-214-5p 0 0 1
chr15:92618605|92618924 hsa-miR-214-3p 0 0 1
chr15:92618605|92618924 hsa-miR-27b-5p 0 0 1
chr15:92618605|92618924 hsa-miR-27b-3p 0 0 1
chr15:92618605|92618924 hsa-miR-186-5p 0 0 1
chr15:92618605|92618924 hsa-miR-186-3p 0 0 1
chr15:92618605|92618924 hsa-miR-106b-5p 0 0 1
chr15:92618605|92618924 hsa-miR-106b-3p 0 0 1
chr15:92618605|92618924 hsa-miR-302a-5p 0 0 1
chr15:92618605|92618924 hsa-miR-302a-3p 0 0 1
chr15:92618605|92618924 hsa-miR-302b-5p 0 0 1
chr15:92618605|92618924 hsa-miR-302b-3p 0 0 1
chr15:92618605|92618924 hsa-miR-302c-5p 0 0 1
chr15:92618605|92618924 hsa-miR-302c-3p 0 0 1
chr15:92618605|92618924 hsa-miR-302d-5p 0 0 1
chr15:92618605|92618924 hsa-miR-302d-3p 0 0 1
chr15:92618605|92618924 hsa-miR-372-5p 0 0 1
chr15:92618605|92618924 hsa-miR-372-3p 0 0 1
chr15:92618605|92618924 hsa-miR-373-5p 0 0 1
chr15:92618605|92618924 hsa-miR-373-3p 0 0 1
chr15:92618605|92618924 hsa-miR-20b-5p 0 0 1
chr15:92618605|92618924 hsa-miR-20b-3p 0 0 1
chr15:92618605|92618924 hsa-miR-520e-5p 0 0 1
chr15:92618605|92618924 hsa-miR-520e-3p 0 0 1
chr15:92618605|92618924 hsa-miR-520b-5p 0 0 1
chr15:92618605|92618924 hsa-miR-520b-3p 0 0 1
chr15:92618605|92618924 hsa-miR-519d-5p 0 0 1
chr15:92618605|92618924 hsa-miR-519d-3p 0 0 1
chr15:92618605|92618924 hsa-miR-619-5p 0 0 1
chr15:92618605|92618924 hsa-miR-619-3p 0 0 1
chr15:92618605|92618924 hsa-miR-631 0 0 1
chr15:92618605|92618924 hsa-miR-636 0 0 1
chr15:92618605|92618924 hsa-miR-543 0 0 1
chr15:92618605|92618924 hsa-miR-922 0 1 1
chr15:92618605|92618924 hsa-miR-940 0 0 1
chr15:92618605|92618924 hsa-miR-942-5p 0 0 1
chr15:92618605|92618924 hsa-miR-942-3p 0 0 1
chr15:92618605|92618924 hsa-miR-1237-5p 0 0 1
chr15:92618605|92618924 hsa-miR-1237-3p 0 0 1
chr15:92618605|92618924 hsa-miR-548e-5p 0 0 1
chr15:92618605|92618924 hsa-miR-548e-3p 0 0 1
chr15:92618605|92618924 hsa-miR-1248 0 0 1
chr15:92618605|92618924 hsa-miR-548g-5p 0 0 1
chr15:92618605|92618924 hsa-miR-548g-3p 0 0 1
chr15:92618605|92618924 hsa-miR-302e 0 0 1
chr15:92618605|92618924 hsa-miR-513b-5p 0 0 1
chr15:92618605|92618924 hsa-miR-513b-3p 0 0 1
chr15:92618605|92618924 hsa-miR-129-5p 0 0 1
chr15:92618605|92618924 hsa-miR-145-5p 0 0 1
chr15:92618605|92618924 hsa-miR-770-5p 0 0 1
chr15:92618605|92618924 hsa-miR-525-5p 0 0 1
chr15:92618605|92618924 hsa-miR-767-3p 0 0 1
chr15:92618605|92618924 hsa-miR-520a-5p 0 0 1
chr15:92618605|92618924 hsa-miR-520d-3p 0 0 1
chr15:92618605|92618924 hsa-miR-520a-3p 0 0 1
chr15:92618605|92618924 hsa-miR-520c-3p 0 0 1
chr15:92618605|92618924 hsa-miR-548a-3p 0 0 1
chr15:92618605|92618924 hsa-miR-128 0 0 1
chr15:92618605|92618924 hsa-miR-548f 0 0 1
chr15:92618605|92618924 hsa-miR-218 0 0 1
chr15:92618605|92618924 hsa-miR-612 1 0 0
chr15:92618605|92618924 hsa-miR-2113 1 0 0
chr15:92618605|92618924 hsa-miR-297 1 0 0
chr15:92618605|92618924 hsa-miR-3148 1 1 0
chr15:92618605|92618924 hsa-miR-4326 0 1 0
chr15:92618605|92618924 hsa-miR-4291 1 1 0
chr15:92618605|92618924 hsa-miR-3684 0 1 0
chr15:92618605|92618924 hsa-miR-4518 1 1 0
chr15:92618605|92618924 hsa-miR-6131 0 1 0
chr15:92618605|92618924 hsa-miR-6860 1 1 0
chr15:92618605|92618924 hsa-miR-7515 0 1 0
chr15:92618605|92618924 hsa-miR-11401 0 1 0
chr15:92618605|92618924 hsa-miR-12119 0 1 0
chr15:92618605|92618924 hsa-miR-6734-5p 0 1 0
chr15:92618605|92618924 hsa-miR-1972 1 0 0
chr15:92618605|92618924 hsa-miR-6760-5p 0 1 0
chr15:92618605|92618924 hsa-miR-6728-3p 0 1 0
chr15:92618605|92618924 hsa-miR-3691-5p 0 1 0
chr15:92618605|92618924 hsa-miR-4764-5p 0 1 0
chr15:92618605|92618924 hsa-miR-6780a-3p 0 1 0
chr15:92618605|92618924 hsa-miR-4638-3p 0 1 0
chr15:92618605|92618924 hsa-miR-6769a-3p 0 1 0
chr15:92618605|92618924 hsa-miR-5584-5p 0 1 0
chr15:92618605|92618924 hsa-miR-6864-5p 0 1 0
chr15:92618605|92618924 hsa-miR-574-5p 1 1 0
chr15:92618605|92618924 hsa-miR-7113-5p 0 1 0
chr15:92618605|92618924 hsa-miR-518c-5p 0 1 0
chr15:92618605|92618924 hsa-miR-4679 0 1 0
chr15:92618605|92618924 hsa-miR-3127-3p 0 1 0
chr15:92618605|92618924 hsa-miR-449c-5p 0 1 0
chr15:92618605|92618924 hsa-miR-3187-5p 1 1 0
chr15:92618605|92618924 hsa-miR-6739-5p 0 1 0
chr15:92618605|92618924 hsa-miR-6876-5p 0 1 0
chr15:92618605|92618924 hsa-miR-6756-3p 0 1 0
chr15:92618605|92618924 hsa-miR-3059-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr15:92618605|92618924
ORF Type ORF1
Protein Length 66
Nucleotide Length 201
Protein Sequence MFYRYHTRAHAHTCTHTHTHTHSFSLILEILCELATLISAEPFFFLKKKKKEERKGATDVSRSGRG
Nucleotide Sequence CTGTTTTATAGGTATCACACACGTGCACACGCACACACGTGCACACACACACACACACACACGCACAGTTTTTCCCTGATACTGGAAATTCTTTGTGAACTAGCCACGCTGATTTCTGCTGAACCTTTTTTTTTTTTAAAAAAAAAAAAAAAGGAAGAAAGAAAAGGAGCCACAGACGTGTCCAGGTCTGGAAGGGGCTGA
CircID chr15:92618605|92618924
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MPSTFLSLQRRRNCFIGITHVHTHTRAHTHTHTRTVFP
Nucleotide Sequence CTGCCTAGCACTTTCCTTTCCCTTCAGAGAAGGAGAAACTGTTTTATAGGTATCACACACGTGCACACGCACACACGTGCACACACACACACACACACACGCACAGTTTTTCCCTGA
CircID chr15:92618605|92618924
ORF Type ORF3
Protein Length 56
Nucleotide Length 171
Protein Sequence MDTSVAPFLSSFFFFFKKKKGSAEISVASSQRISSIREKLCVCVCVCVHVCACARV
Nucleotide Sequence CTGGACACGTCTGTGGCTCCTTTTCTTTCTTCCTTTTTTTTTTTTTTTAAAAAAAAAAAAGGTTCAGCAGAAATCAGCGTGGCTAGTTCACAAAGAATTTCCAGTATCAGGGAAAAACTGTGCGTGTGTGTGTGTGTGTGTGTGCACGTGTGTGCGTGTGCACGTGTGTGA
CircID chr15:92618605|92618924
ORF Type ORF4
Protein Length 105
Nucleotide Length 315
Protein Sequence MCLELVSPFQTWTRLWLLFFLPFFFFLKKKKVQQKSAWLVHKEFPVSGKNCACVCVCVCTCVRVHVCDTYKTVSPSLKGKESARQPVISNILCAFLLFLCSVTVL
Nucleotide Sequence ATGTGCTTAGAGCTGGTCAGCCCCTTCCAGACCTGGACACGTCTGTGGCTCCTTTTCTTTCTTCCTTTTTTTTTTTTTTTAAAAAAAAAAAAGGTTCAGCAGAAATCAGCGTGGCTAGTTCACAAAGAATTTCCAGTATCAGGGAAAAACTGTGCGTGTGTGTGTGTGTGTGTGTGCACGTGTGTGCGTGTGCACGTGTGTGATACCTATAAAACAGTTTCTCCTTCTCTGAAGGGAAAGGAAAGTGCTAGGCAGCCTGTGATTAGCAACATTCTTTGTGCTTTTTTGTTGTTCCTCTGCTCTGTCACAGTTCTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab