CircRNA Information

General Information
circRNA Basic Information
CircID chr15:92967325|92967513
Strand +
CircType exon
Host Gene ENSG00000173575.19;
Algorism find_circ;CIRI2;DCC;
Sequence GTTTGAATTTTGGGAAGATTTTGAAGAAGACCATGGGAAGGGGAGAGAAAATGGCTACCAGAGTCTTCATAAGGTGCTAGAGCCTTTCCTTCTCCGGAGAGTCAAAAAAGATGTGGAGAAATCCCTTCCTGCTAAAGTGGAACAGATTCTCAGGGTGGAGATGTCAGCCCTTCAGAAACAGTATTACAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:92967325|92967513 hsa-miR-17-5p 0 0 1
chr15:92967325|92967513 hsa-miR-17-3p 0 0 1
chr15:92967325|92967513 hsa-miR-18a-5p 0 0 1
chr15:92967325|92967513 hsa-miR-18a-3p 0 0 1
chr15:92967325|92967513 hsa-miR-20a-5p 0 0 1
chr15:92967325|92967513 hsa-miR-20a-3p 0 0 1
chr15:92967325|92967513 hsa-miR-93-5p 0 0 1
chr15:92967325|92967513 hsa-miR-93-3p 0 0 1
chr15:92967325|92967513 hsa-miR-106a-5p 0 0 1
chr15:92967325|92967513 hsa-miR-106a-3p 0 0 1
chr15:92967325|92967513 hsa-miR-144-5p 0 0 1
chr15:92967325|92967513 hsa-miR-144-3p 0 0 1
chr15:92967325|92967513 hsa-miR-185-5p 0 0 1
chr15:92967325|92967513 hsa-miR-185-3p 0 0 1
chr15:92967325|92967513 hsa-miR-106b-5p 0 0 1
chr15:92967325|92967513 hsa-miR-106b-3p 0 0 1
chr15:92967325|92967513 hsa-miR-370-5p 0 0 1
chr15:92967325|92967513 hsa-miR-370-3p 0 0 1
chr15:92967325|92967513 hsa-miR-18b-5p 0 0 1
chr15:92967325|92967513 hsa-miR-18b-3p 0 0 1
chr15:92967325|92967513 hsa-miR-20b-5p 0 0 1
chr15:92967325|92967513 hsa-miR-20b-3p 0 0 1
chr15:92967325|92967513 hsa-miR-519d-5p 0 0 1
chr15:92967325|92967513 hsa-miR-519d-3p 0 0 1
chr15:92967325|92967513 hsa-miR-539-5p 0 0 1
chr15:92967325|92967513 hsa-miR-539-3p 0 0 1
chr15:92967325|92967513 hsa-miR-591 0 1 1
chr15:92967325|92967513 hsa-miR-605-5p 0 0 1
chr15:92967325|92967513 hsa-miR-605-3p 0 0 1
chr15:92967325|92967513 hsa-miR-620 0 0 1
chr15:92967325|92967513 hsa-miR-924 0 0 1
chr15:92967325|92967513 hsa-miR-1237-5p 0 0 1
chr15:92967325|92967513 hsa-miR-1237-3p 0 0 1
chr15:92967325|92967513 hsa-miR-1203 0 0 1
chr15:92967325|92967513 hsa-miR-1248 0 0 1
chr15:92967325|92967513 hsa-miR-1266-5p 0 0 1
chr15:92967325|92967513 hsa-miR-1266-3p 0 0 1
chr15:92967325|92967513 hsa-miR-1270 0 0 1
chr15:92967325|92967513 hsa-miR-188-5p 0 1 1
chr15:92967325|92967513 hsa-miR-576-3p 0 1 1
chr15:92967325|92967513 hsa-miR-129-3p 0 0 1
chr15:92967325|92967513 hsa-miR-608 1 0 0
chr15:92967325|92967513 hsa-miR-3154 1 0 0
chr15:92967325|92967513 hsa-miR-3175 0 1 0
chr15:92967325|92967513 hsa-miR-3185 0 1 0
chr15:92967325|92967513 hsa-miR-4306 0 1 0
chr15:92967325|92967513 hsa-miR-3689c 1 0 0
chr15:92967325|92967513 hsa-miR-4518 0 1 0
chr15:92967325|92967513 hsa-miR-4644 0 1 0
chr15:92967325|92967513 hsa-miR-4689 1 0 0
chr15:92967325|92967513 hsa-miR-4706 1 0 0
chr15:92967325|92967513 hsa-miR-4739 1 0 0
chr15:92967325|92967513 hsa-miR-4748 1 0 0
chr15:92967325|92967513 hsa-miR-5739 0 1 0
chr15:92967325|92967513 hsa-miR-7150 1 0 0
chr15:92967325|92967513 hsa-miR-8085 0 1 0
chr15:92967325|92967513 hsa-miR-9500 1 0 0
chr15:92967325|92967513 hsa-miR-12114 1 0 0
chr15:92967325|92967513 hsa-miR-12115 1 0 0
chr15:92967325|92967513 hsa-miR-12117 0 1 0
chr15:92967325|92967513 hsa-miR-6734-5p 1 0 0
chr15:92967325|92967513 hsa-miR-3150a-3p 1 0 0
chr15:92967325|92967513 hsa-miR-7106-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6894-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6728-5p 1 0 0
chr15:92967325|92967513 hsa-miR-491-5p 1 1 0
chr15:92967325|92967513 hsa-miR-6835-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6740-5p 1 0 0
chr15:92967325|92967513 hsa-miR-1229-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6771-5p 1 0 0
chr15:92967325|92967513 hsa-miR-3202 0 1 0
chr15:92967325|92967513 hsa-miR-361-5p 0 1 0
chr15:92967325|92967513 hsa-miR-6824-5p 1 0 0
chr15:92967325|92967513 hsa-miR-2114-5p 0 1 0
chr15:92967325|92967513 hsa-miR-3074-5p 0 1 0
chr15:92967325|92967513 hsa-miR-3124-3p 0 1 0
chr15:92967325|92967513 hsa-miR-1233-5p 1 0 0
chr15:92967325|92967513 hsa-miR-3689b-3p 1 0 0
chr15:92967325|92967513 hsa-miR-4763-3p 1 0 0
chr15:92967325|92967513 hsa-miR-6778-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6787-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6812-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6870-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6756-5p 1 0 0
chr15:92967325|92967513 hsa-miR-1249-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6763-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6779-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6780a-5p 1 0 0
chr15:92967325|92967513 hsa-miR-4728-5p 1 1 0
chr15:92967325|92967513 hsa-miR-5196-5p 1 1 0
chr15:92967325|92967513 hsa-miR-6780b-5p 1 0 0
chr15:92967325|92967513 hsa-miR-3689a-3p 1 0 0
chr15:92967325|92967513 hsa-miR-6777-5p 1 1 0
chr15:92967325|92967513 hsa-miR-939-5p 1 0 0
chr15:92967325|92967513 hsa-miR-3679-5p 1 0 0
chr15:92967325|92967513 hsa-miR-4646-5p 1 0 0
chr15:92967325|92967513 hsa-miR-4747-5p 1 0 0
chr15:92967325|92967513 hsa-miR-4716-3p 0 1 0
chr15:92967325|92967513 hsa-miR-6785-5p 1 0 0
chr15:92967325|92967513 hsa-miR-4667-5p 1 0 0
chr15:92967325|92967513 hsa-miR-6859-5p 0 1 0
chr15:92967325|92967513 hsa-miR-6764-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr15:92967325|92967513
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MRICSTLAGRDFSTSFLTLRRRKGSSTL
Nucleotide Sequence CTGAGAATCTGTTCCACTTTAGCAGGAAGGGATTTCTCCACATCTTTTTTGACTCTCCGGAGAAGGAAAGGCTCTAGCACCTTATGA
CircID chr15:92967325|92967513
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence LNFGKILKKTMGRGEKMATRVFIRC
Nucleotide Sequence TTGAATTTTGGGAAGATTTTGAAGAAGACCATGGGAAGGGGAGAGAAAATGGCTACCAGAGTCTTCATAAGGTGCTAG
CircID chr15:92967325|92967513
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MWRNPFLLKWNRFSGWRCQPFRNSIT
Nucleotide Sequence ATGTGGAGAAATCCCTTCCTGCTAAAGTGGAACAGATTCTCAGGGTGGAGATGTCAGCCCTTCAGAAACAGTATTACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr15:92967325|92967513 NOP56 1 0 0
chr15:92967325|92967513 MOV10 0 0 1
chr15:92967325|92967513 ELAVL1 3 4 1
chr15:92967325|92967513 ELAVL3 1 1 0
chr15:92967325|92967513 SF3B4 1 0 0
chr15:92967325|92967513 PRPF8 0 4 1
chr15:92967325|92967513 UPF1 1 0 0
chr15:92967325|92967513 TAF15 1 0 0
chr15:92967325|92967513 FMR1 0 0 3
chr15:92967325|92967513 TIA1 0 2 0
chr15:92967325|92967513 TROVE2 0 1 0
chr15:92967325|92967513 FUS 1 0 0
chr15:92967325|92967513 GNL3 0 1 0
chr15:92967325|92967513 DGCR8 0 1 0
chr15:92967325|92967513 SRSF7 1 0 1
chr15:92967325|92967513 SRSF1 2 0 3
chr15:92967325|92967513 NOP58 0 0 2
chr15:92967325|92967513 SRSF3 1 1 0
chr15:92967325|92967513 U2AF1 1 0 1
chr15:92967325|92967513 TNRC6A 0 1 0
chr15:92967325|92967513 U2AF2 10 8 1
chr15:92967325|92967513 SRSF9 0 0 1
chr15:92967325|92967513 DDX54 1 0 5
chr15:92967325|92967513 RBM10 2 1 0
chr15:92967325|92967513 HNRNPL 0 1 0
chr15:92967325|92967513 SF3A3 1 0 1
chr15:92967325|92967513 HNRNPC 0 5 0
chr15:92967325|92967513 TRA2A 0 0 5
chr15:92967325|92967513 KHSRP 0 3 0
chr15:92967325|92967513 HNRNPA1 2 0 0
chr15:92967325|92967513 SMNDC1 1 0 0
chr15:92967325|92967513 ACIN1 0 0 2
chr15:92967325|92967513 LIN28B 1 3 3
chr15:92967325|92967513 RANGAP1 0 0 1
chr15:92967325|92967513 FXR1 0 0 1
chr15:92967325|92967513 FXR2 0 0 2
chr15:92967325|92967513 SND1 0 0 2
chr15:92967325|92967513 IGF2BP3 0 1 0
chr15:92967325|92967513 IGF2BP2 3 4 3
chr15:92967325|92967513 TARDBP 2 2 0
chr15:92967325|92967513 YTHDC1 0 2 0
chr15:92967325|92967513 FBL 1 0 1
chr15:92967325|92967513 BUD13 0 0 3
chr15:92967325|92967513 RBFOX2 0 0 1
chr15:92967325|92967513 CSTF2T 1 1 1
chr15:92967325|92967513 YWHAG 0 0 1
chr15:92967325|92967513 RBM22 0 1 0
chr15:92967325|92967513 AIFM1 0 0 1
chr15:92967325|92967513 EIF4A3 5 0 2
chr15:92967325|92967513 AGO2 0 0 1
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab