CircRNA Information

General Information
circRNA Basic Information
CircID chr16:10923179|10923387
Strand +
CircType exon
Host Gene ENSG00000179583.16;
Algorism CIRI2;
Sequence CTTCACAAGGACACTGCCCCCAACCCACTGCGGCTCTCCCCTCCCAAGCCCACCCTGGTTACCCTGTCCAGAGCACAGCTGGGATCATCTCAGGCTGATCCGTGAATCCTGTTGTTGCAGGTGTTCCTGGACACTGAATGGGATGGTGGGCGTCCACATCCTGCAAGGGGGGATGGGACTCAGAGCCAGGTTAGAGGAGAGAGGGCGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:10923179|10923387 hsa-miR-198 0 0 1
chr16:10923179|10923387 hsa-miR-34a-5p 0 0 1
chr16:10923179|10923387 hsa-miR-34a-3p 0 0 1
chr16:10923179|10923387 hsa-miR-143-5p 0 0 1
chr16:10923179|10923387 hsa-miR-143-3p 0 0 1
chr16:10923179|10923387 hsa-miR-149-5p 0 0 1
chr16:10923179|10923387 hsa-miR-149-3p 0 0 1
chr16:10923179|10923387 hsa-miR-422a 0 0 1
chr16:10923179|10923387 hsa-miR-449a 0 1 1
chr16:10923179|10923387 hsa-miR-649 0 0 1
chr16:10923179|10923387 hsa-miR-449b-5p 0 0 1
chr16:10923179|10923387 hsa-miR-449b-3p 0 0 1
chr16:10923179|10923387 hsa-miR-541-5p 0 0 1
chr16:10923179|10923387 hsa-miR-541-3p 0 0 1
chr16:10923179|10923387 hsa-miR-665 0 0 1
chr16:10923179|10923387 hsa-miR-873-5p 0 0 1
chr16:10923179|10923387 hsa-miR-873-3p 0 0 1
chr16:10923179|10923387 hsa-miR-760 1 1 1
chr16:10923179|10923387 hsa-miR-1286 0 0 1
chr16:10923179|10923387 hsa-miR-1265 0 1 1
chr16:10923179|10923387 hsa-miR-1275 1 0 1
chr16:10923179|10923387 hsa-miR-486-3p 0 0 1
chr16:10923179|10923387 hsa-miR-490-3p 0 0 1
chr16:10923179|10923387 hsa-miR-654-5p 1 0 1
chr16:10923179|10923387 hsa-miR-34c-5p 0 0 1
chr16:10923179|10923387 hsa-miR-378 0 0 1
chr16:10923179|10923387 hsa-miR-326 1 1 0
chr16:10923179|10923387 hsa-miR-608 1 0 0
chr16:10923179|10923387 hsa-miR-623 0 1 0
chr16:10923179|10923387 hsa-miR-658 1 0 0
chr16:10923179|10923387 hsa-miR-762 1 0 0
chr16:10923179|10923387 hsa-miR-1268a 1 0 0
chr16:10923179|10923387 hsa-miR-2861 1 0 0
chr16:10923179|10923387 hsa-miR-3141 1 0 0
chr16:10923179|10923387 hsa-miR-3147 1 0 0
chr16:10923179|10923387 hsa-miR-3175 1 1 0
chr16:10923179|10923387 hsa-miR-4322 1 0 0
chr16:10923179|10923387 hsa-miR-4260 1 0 0
chr16:10923179|10923387 hsa-miR-3909 1 0 0
chr16:10923179|10923387 hsa-miR-3918 1 0 0
chr16:10923179|10923387 hsa-miR-3921 0 1 0
chr16:10923179|10923387 hsa-miR-1268b 1 0 0
chr16:10923179|10923387 hsa-miR-4447 1 0 0
chr16:10923179|10923387 hsa-miR-4505 1 0 0
chr16:10923179|10923387 hsa-miR-4507 1 1 0
chr16:10923179|10923387 hsa-miR-1587 1 0 0
chr16:10923179|10923387 hsa-miR-4651 1 0 0
chr16:10923179|10923387 hsa-miR-4674 1 0 0
chr16:10923179|10923387 hsa-miR-4706 1 0 0
chr16:10923179|10923387 hsa-miR-4739 1 0 0
chr16:10923179|10923387 hsa-miR-5193 1 0 0
chr16:10923179|10923387 hsa-miR-5194 1 0 0
chr16:10923179|10923387 hsa-miR-5572 1 0 0
chr16:10923179|10923387 hsa-miR-5698 1 0 0
chr16:10923179|10923387 hsa-miR-5787 1 0 0
chr16:10923179|10923387 hsa-miR-6133 1 0 0
chr16:10923179|10923387 hsa-miR-6860 1 0 0
chr16:10923179|10923387 hsa-miR-8057 0 1 0
chr16:10923179|10923387 hsa-miR-8072 1 0 0
chr16:10923179|10923387 hsa-miR-18a-3p 1 0 0
chr16:10923179|10923387 hsa-miR-92a-1-5p 0 1 0
chr16:10923179|10923387 hsa-miR-6734-5p 1 0 0
chr16:10923179|10923387 hsa-miR-4731-5p 1 0 0
chr16:10923179|10923387 hsa-miR-3150a-3p 1 0 0
chr16:10923179|10923387 hsa-miR-7106-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6892-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6799-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6728-5p 1 0 0
chr16:10923179|10923387 hsa-miR-8071 1 0 0
chr16:10923179|10923387 hsa-miR-3192-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6727-5p 1 0 0
chr16:10923179|10923387 hsa-miR-3622b-5p 1 0 0
chr16:10923179|10923387 hsa-miR-4655-5p 1 0 0
chr16:10923179|10923387 hsa-miR-197-5p 1 0 0
chr16:10923179|10923387 hsa-miR-7110-3p 1 1 0
chr16:10923179|10923387 hsa-miR-6841-3p 0 1 0
chr16:10923179|10923387 hsa-miR-6726-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6845-3p 1 1 0
chr16:10923179|10923387 hsa-miR-6742-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6793-5p 1 1 0
chr16:10923179|10923387 hsa-miR-877-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6798-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6881-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6782-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6765-3p 1 0 0
chr16:10923179|10923387 hsa-miR-5006-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6786-5p 1 0 0
chr16:10923179|10923387 hsa-miR-7109-5p 1 0 0
chr16:10923179|10923387 hsa-miR-1226-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6740-5p 1 1 0
chr16:10923179|10923387 hsa-miR-185-5p 1 0 0
chr16:10923179|10923387 hsa-miR-4764-5p 0 1 0
chr16:10923179|10923387 hsa-miR-1228-5p 1 0 0
chr16:10923179|10923387 hsa-miR-296-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6771-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6823-5p 1 0 0
chr16:10923179|10923387 hsa-miR-92b-5p 1 0 0
chr16:10923179|10923387 hsa-miR-7111-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6824-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6786-3p 0 1 0
chr16:10923179|10923387 hsa-miR-199a-5p 0 1 0
chr16:10923179|10923387 hsa-miR-6743-3p 0 1 0
chr16:10923179|10923387 hsa-miR-6813-3p 1 0 0
chr16:10923179|10923387 hsa-miR-4727-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6741-3p 1 0 0
chr16:10923179|10923387 hsa-miR-4632-3p 0 1 0
chr16:10923179|10923387 hsa-miR-328-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6880-3p 1 1 0
chr16:10923179|10923387 hsa-miR-518c-5p 0 1 0
chr16:10923179|10923387 hsa-miR-1249-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6733-3p 0 1 0
chr16:10923179|10923387 hsa-miR-1207-5p 1 0 0
chr16:10923179|10923387 hsa-miR-1233-5p 1 0 0
chr16:10923179|10923387 hsa-miR-1273h-5p 1 1 0
chr16:10923179|10923387 hsa-miR-4763-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6769b-5p 1 1 0
chr16:10923179|10923387 hsa-miR-6778-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6787-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6816-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6870-5p 1 0 0
chr16:10923179|10923387 hsa-miR-1343-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6756-5p 1 1 0
chr16:10923179|10923387 hsa-miR-6769a-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6803-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6819-5p 1 0 0
chr16:10923179|10923387 hsa-miR-1249-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6751-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6774-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6779-5p 1 1 0
chr16:10923179|10923387 hsa-miR-6780a-5p 1 1 0
chr16:10923179|10923387 hsa-miR-6797-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6879-5p 1 0 0
chr16:10923179|10923387 hsa-miR-4685-3p 1 0 0
chr16:10923179|10923387 hsa-miR-3620-5p 1 0 0
chr16:10923179|10923387 hsa-miR-4728-5p 1 1 0
chr16:10923179|10923387 hsa-miR-5196-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6780b-5p 1 0 0
chr16:10923179|10923387 hsa-miR-328-5p 1 0 0
chr16:10923179|10923387 hsa-miR-3689a-3p 0 1 0
chr16:10923179|10923387 hsa-miR-4632-5p 1 0 0
chr16:10923179|10923387 hsa-miR-4685-5p 1 0 0
chr16:10923179|10923387 hsa-miR-4725-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6738-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6794-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6883-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6885-5p 1 0 0
chr16:10923179|10923387 hsa-miR-939-5p 1 0 0
chr16:10923179|10923387 hsa-miR-3940-5p 1 1 0
chr16:10923179|10923387 hsa-miR-6731-5p 1 1 0
chr16:10923179|10923387 hsa-miR-5008-3p 0 1 0
chr16:10923179|10923387 hsa-miR-1914-3p 1 0 0
chr16:10923179|10923387 hsa-miR-6785-5p 1 0 0
chr16:10923179|10923387 hsa-miR-6511a-3p 1 1 0
chr16:10923179|10923387 hsa-miR-3059-5p 1 0 0
chr16:10923179|10923387 hsa-miR-4723-3p 1 0 0
chr16:10923179|10923387 hsa-miR-4769-3p 1 0 0
chr16:10923179|10923387 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:10923179|10923387
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MRLSPPKPTLVTLSRAQLGSSQADP
Nucleotide Sequence CTGCGGCTCTCCCCTCCCAAGCCCACCCTGGTTACCCTGTCCAGAGCACAGCTGGGATCATCTCAGGCTGATCCGTGA
CircID chr16:10923179|10923387
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MLLQVFLDTEWDGGRPHPARGDGTQSQVRGERA
Nucleotide Sequence CTGTTGTTGCAGGTGTTCCTGGACACTGAATGGGATGGTGGGCGTCCACATCCTGCAAGGGGGGATGGGACTCAGAGCCAGGTTAGAGGAGAGAGGGCG
CircID chr16:10923179|10923387
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MPPTHCGSPLPSPPWLPCPEHSWDHLRLIRESCCCRCSWTLNGMVGVHILQGGMGLRARLEERGR
Nucleotide Sequence CTGCCCCCAACCCACTGCGGCTCTCCCCTCCCAAGCCCACCCTGGTTACCCTGTCCAGAGCACAGCTGGGATCATCTCAGGCTGATCCGTGAATCCTGTTGTTGCAGGTGTTCCTGGACACTGAATGGGATGGTGGGCGTCCACATCCTGCAAGGGGGGATGGGACTCAGAGCCAGGTTAGAGGAGAGAGGGCGG
CircID chr16:10923179|10923387
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MQDVDAHHPIQCPGTPATTGFTDQPEMIPAVLWTG
Nucleotide Sequence TTGCAGGATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATGATCCCAGCTGTGCTCTGGACAGGGTAA
CircID chr16:10923179|10923387
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MALSPIPPCRMWTPTIPFSVQEHLQQQDSRISLR
Nucleotide Sequence CTGGCTCTGAGTCCCATCCCCCCTTGCAGGATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATGA
CircID chr16:10923179|10923387
ORF Type ORF6
Protein Length 26
Nucleotide Length 78
Protein Sequence MCSGQGNQGGLGRGEPQWVGGSVLVK
Nucleotide Sequence CTGTGCTCTGGACAGGGTAACCAGGGTGGGCTTGGGAGGGGAGAGCCGCAGTGGGTTGGGGGCAGTGTCCTTGTGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab