CircRNA Information

General Information
circRNA Basic Information
CircID chr16:11679315|11679657
Strand -
CircType exon
Host Gene ENSG00000153066.11;
Algorism CIRI2;
Sequence CTCTCTCTGGGCCGCCAGGCTTTCAGCTCCATCCCTGCCCTCCAGTTTCCTCTCCATGGTCGCCACCAGGATCTTGAGCCACGTGTTCTCGGTAAGGAGGTTTTCTGAGGCATCGGCCAGCTCCTGCAGCTTGCGGGCCAGCTCCTGCAGCTCACGTGTCTTCTGCTCATAGAGGGCCTGCAGCTGCTCACTGTGTGCGTGGAGCAGGCTGTGCTGCTCTTCCAGGGCCCGCTGCTGCTGCCGCAGCCGGTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:11679315|11679657 hsa-miR-15a-5p 0 0 1
chr16:11679315|11679657 hsa-miR-15a-3p 0 0 1
chr16:11679315|11679657 hsa-miR-15b-5p 0 0 1
chr16:11679315|11679657 hsa-miR-15b-3p 0 0 1
chr16:11679315|11679657 hsa-miR-143-5p 0 0 1
chr16:11679315|11679657 hsa-miR-143-3p 0 0 1
chr16:11679315|11679657 hsa-miR-185-5p 0 0 1
chr16:11679315|11679657 hsa-miR-185-3p 0 0 1
chr16:11679315|11679657 hsa-miR-195-5p 0 0 1
chr16:11679315|11679657 hsa-miR-195-3p 0 0 1
chr16:11679315|11679657 hsa-miR-424-5p 0 0 1
chr16:11679315|11679657 hsa-miR-424-3p 0 0 1
chr16:11679315|11679657 hsa-miR-497-5p 0 0 1
chr16:11679315|11679657 hsa-miR-497-3p 0 0 1
chr16:11679315|11679657 hsa-miR-503-5p 0 0 1
chr16:11679315|11679657 hsa-miR-503-3p 0 0 1
chr16:11679315|11679657 hsa-miR-558 0 0 1
chr16:11679315|11679657 hsa-miR-591 0 0 1
chr16:11679315|11679657 hsa-miR-596 0 0 1
chr16:11679315|11679657 hsa-miR-604 0 0 1
chr16:11679315|11679657 hsa-miR-646 0 0 1
chr16:11679315|11679657 hsa-miR-657 0 0 1
chr16:11679315|11679657 hsa-miR-766-5p 0 0 1
chr16:11679315|11679657 hsa-miR-766-3p 0 0 1
chr16:11679315|11679657 hsa-miR-298 0 0 1
chr16:11679315|11679657 hsa-miR-708-5p 0 0 1
chr16:11679315|11679657 hsa-miR-708-3p 0 0 1
chr16:11679315|11679657 hsa-miR-1205 0 1 1
chr16:11679315|11679657 hsa-miR-1286 0 0 1
chr16:11679315|11679657 hsa-miR-1291 0 1 1
chr16:11679315|11679657 hsa-miR-1825 0 1 1
chr16:11679315|11679657 hsa-miR-199a-5p 0 0 1
chr16:11679315|11679657 hsa-miR-1289 0 1 1
chr16:11679315|11679657 hsa-miR-28-5p 0 0 1
chr16:11679315|11679657 hsa-miR-556-5p 0 0 1
chr16:11679315|11679657 hsa-miR-199b-5p 0 0 1
chr16:11679315|11679657 hsa-miR-1207-5p 1 1 1
chr16:11679315|11679657 hsa-miR-519b-3p 0 0 1
chr16:11679315|11679657 hsa-miR-519c-3p 0 0 1
chr16:11679315|11679657 hsa-miR-128 0 0 1
chr16:11679315|11679657 hsa-miR-16 0 0 1
chr16:11679315|11679657 hsa-miR-7 0 0 1
chr16:11679315|11679657 hsa-miR-1273 0 0 1
chr16:11679315|11679657 hsa-miR-24 0 0 1
chr16:11679315|11679657 hsa-miR-519a 0 0 1
chr16:11679315|11679657 hsa-miR-608 1 0 0
chr16:11679315|11679657 hsa-miR-640 1 0 0
chr16:11679315|11679657 hsa-miR-663a 1 0 0
chr16:11679315|11679657 hsa-miR-762 1 0 0
chr16:11679315|11679657 hsa-miR-1183 1 0 0
chr16:11679315|11679657 hsa-miR-2278 0 1 0
chr16:11679315|11679657 hsa-miR-3125 0 1 0
chr16:11679315|11679657 hsa-miR-3132 1 0 0
chr16:11679315|11679657 hsa-miR-3139 0 1 0
chr16:11679315|11679657 hsa-miR-4456 0 1 0
chr16:11679315|11679657 hsa-miR-4467 1 0 0
chr16:11679315|11679657 hsa-miR-4468 0 1 0
chr16:11679315|11679657 hsa-miR-4487 0 1 0
chr16:11679315|11679657 hsa-miR-4496 0 1 0
chr16:11679315|11679657 hsa-miR-4523 0 1 0
chr16:11679315|11679657 hsa-miR-3960 1 1 0
chr16:11679315|11679657 hsa-miR-4651 1 0 0
chr16:11679315|11679657 hsa-miR-4656 1 1 0
chr16:11679315|11679657 hsa-miR-4688 1 0 0
chr16:11679315|11679657 hsa-miR-4689 1 0 0
chr16:11679315|11679657 hsa-miR-4706 1 0 0
chr16:11679315|11679657 hsa-miR-4739 1 0 0
chr16:11679315|11679657 hsa-miR-4751 1 0 0
chr16:11679315|11679657 hsa-miR-4767 1 0 0
chr16:11679315|11679657 hsa-miR-4770 0 1 0
chr16:11679315|11679657 hsa-miR-5192 1 0 0
chr16:11679315|11679657 hsa-miR-6077 0 1 0
chr16:11679315|11679657 hsa-miR-6088 1 1 0
chr16:11679315|11679657 hsa-miR-6126 0 1 0
chr16:11679315|11679657 hsa-miR-6745 1 1 0
chr16:11679315|11679657 hsa-miR-6860 1 0 0
chr16:11679315|11679657 hsa-miR-8082 0 1 0
chr16:11679315|11679657 hsa-miR-12115 1 0 0
chr16:11679315|11679657 hsa-miR-12128 1 1 0
chr16:11679315|11679657 hsa-miR-135a-3p 1 0 0
chr16:11679315|11679657 hsa-miR-6734-5p 1 0 0
chr16:11679315|11679657 hsa-miR-504-3p 1 0 0
chr16:11679315|11679657 hsa-miR-671-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6825-5p 1 0 0
chr16:11679315|11679657 hsa-miR-219a-1-3p 1 0 0
chr16:11679315|11679657 hsa-miR-6728-5p 1 0 0
chr16:11679315|11679657 hsa-miR-3622a-5p 0 1 0
chr16:11679315|11679657 hsa-miR-6515-5p 0 1 0
chr16:11679315|11679657 hsa-miR-6089 1 0 0
chr16:11679315|11679657 hsa-miR-6757-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6873-5p 1 1 0
chr16:11679315|11679657 hsa-miR-4722-5p 1 1 0
chr16:11679315|11679657 hsa-miR-6820-5p 0 1 0
chr16:11679315|11679657 hsa-miR-6806-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6721-5p 0 1 0
chr16:11679315|11679657 hsa-miR-6796-3p 0 1 0
chr16:11679315|11679657 hsa-miR-3180-3p 1 0 0
chr16:11679315|11679657 hsa-miR-6782-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6874-5p 0 1 0
chr16:11679315|11679657 hsa-miR-1226-5p 1 0 0
chr16:11679315|11679657 hsa-miR-4738-3p 1 1 0
chr16:11679315|11679657 hsa-miR-4793-5p 1 0 0
chr16:11679315|11679657 hsa-miR-3944-3p 1 0 0
chr16:11679315|11679657 hsa-miR-1229-5p 1 0 0
chr16:11679315|11679657 hsa-miR-4640-5p 1 0 0
chr16:11679315|11679657 hsa-miR-296-3p 1 0 0
chr16:11679315|11679657 hsa-miR-4756-3p 0 1 0
chr16:11679315|11679657 hsa-miR-4713-3p 1 1 0
chr16:11679315|11679657 hsa-miR-6847-5p 1 1 0
chr16:11679315|11679657 hsa-miR-3160-3p 0 1 0
chr16:11679315|11679657 hsa-miR-149-3p 1 0 0
chr16:11679315|11679657 hsa-miR-371b-3p 0 1 0
chr16:11679315|11679657 hsa-miR-16-5p 0 1 0
chr16:11679315|11679657 hsa-miR-10400-5p 1 0 0
chr16:11679315|11679657 hsa-miR-4763-3p 1 1 0
chr16:11679315|11679657 hsa-miR-6787-5p 1 1 0
chr16:11679315|11679657 hsa-miR-3180 1 0 0
chr16:11679315|11679657 hsa-miR-5001-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6726-5p 1 1 0
chr16:11679315|11679657 hsa-miR-6737-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6743-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6769a-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6803-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6813-5p 0 1 0
chr16:11679315|11679657 hsa-miR-6815-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6819-5p 1 0 0
chr16:11679315|11679657 hsa-miR-7107-5p 1 0 0
chr16:11679315|11679657 hsa-miR-1249-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6722-3p 1 1 0
chr16:11679315|11679657 hsa-miR-6779-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6797-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6808-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6879-5p 1 1 0
chr16:11679315|11679657 hsa-miR-7111-5p 1 0 0
chr16:11679315|11679657 hsa-miR-4728-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6836-5p 1 0 0
chr16:11679315|11679657 hsa-miR-10396b-5p 1 0 0
chr16:11679315|11679657 hsa-miR-1909-3p 1 0 0
chr16:11679315|11679657 hsa-miR-328-5p 1 0 0
chr16:11679315|11679657 hsa-miR-4632-5p 1 1 0
chr16:11679315|11679657 hsa-miR-4649-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6729-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6735-5p 1 1 0
chr16:11679315|11679657 hsa-miR-6846-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6848-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6858-5p 1 0 0
chr16:11679315|11679657 hsa-miR-4436b-3p 0 1 0
chr16:11679315|11679657 hsa-miR-6885-5p 1 0 0
chr16:11679315|11679657 hsa-miR-939-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6511a-5p 1 0 0
chr16:11679315|11679657 hsa-miR-3198 0 1 0
chr16:11679315|11679657 hsa-miR-6856-5p 1 0 0
chr16:11679315|11679657 hsa-miR-7843-5p 0 1 0
chr16:11679315|11679657 hsa-miR-4747-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6785-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6762-5p 1 0 0
chr16:11679315|11679657 hsa-miR-6529-5p 0 1 0
chr16:11679315|11679657 hsa-miR-6859-5p 0 1 0
chr16:11679315|11679657 hsa-miR-10394-5p 0 1 0
chr16:11679315|11679657 hsa-miR-135a-2-3p 1 0 0
chr16:11679315|11679657 hsa-miR-6838-5p 0 1 0
chr16:11679315|11679657 hsa-miR-6811-5p 0 1 0
chr16:11679315|11679657 hsa-miR-9902 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:11679315|11679657
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MGRQAFSSIPALQFPLHGRHQDLEPRVLGKEVF
Nucleotide Sequence CTGGGCCGCCAGGCTTTCAGCTCCATCCCTGCCCTCCAGTTTCCTCTCCATGGTCGCCACCAGGATCTTGAGCCACGTGTTCTCGGTAAGGAGGTTTTCTGA
CircID chr16:11679315|11679657
ORF Type ORF2
Protein Length 73
Nucleotide Length 219
Protein Sequence MQLAGQLLQLTCLLLIEGLQLLTVCVEQAVLLFQGPLLLPQPVLISAGTGELGLHLHLCSLEAAYFCSQFLDL
Nucleotide Sequence CTGCAGCTTGCGGGCCAGCTCCTGCAGCTCACGTGTCTTCTGCTCATAGAGGGCCTGCAGCTGCTCACTGTGTGCGTGGAGCAGGCTGTGCTGCTCTTCCAGGGCCCGCTGCTGCTGCCGCAGCCGGTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATCTC
CircID chr16:11679315|11679657
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MPSSFLSMVATRILSHVFSVRRFSEASASSCSLRASSCSSRVFCS
Nucleotide Sequence CTGCCCTCCAGTTTCCTCTCCATGGTCGCCACCAGGATCTTGAGCCACGTGTTCTCGGTAAGGAGGTTTTCTGAGGCATCGGCCAGCTCCTGCAGCTTGCGGGCCAGCTCCTGCAGCTCACGTGTCTTCTGCTCATAG
CircID chr16:11679315|11679657
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MCAWSRLCCSSRARCCCRSRCSSLRALESWDSTCTCARWRLLISALSFWIS
Nucleotide Sequence CTGTGTGCGTGGAGCAGGCTGTGCTGCTCTTCCAGGGCCCGCTGCTGCTGCCGCAGCCGGTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATCTCT
CircID chr16:11679315|11679657
ORF Type ORF5
Protein Length 79
Nucleotide Length 237
Protein Sequence MRHRPAPAACGPAPAAHVSSAHRGPAAAHCVRGAGCAALPGPAAAAAAGAHLCGHWRAGTPPALVLAGGCLFLLSVSGS
Nucleotide Sequence CTGAGGCATCGGCCAGCTCCTGCAGCTTGCGGGCCAGCTCCTGCAGCTCACGTGTCTTCTGCTCATAGAGGGCCTGCAGCTGCTCACTGTGTGCGTGGAGCAGGCTGTGCTGCTCTTCCAGGGCCCGCTGCTGCTGCCGCAGCCGGTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATCT
CircID chr16:11679315|11679657
ORF Type ORF6
Protein Length 110
Nucleotide Length 330
Protein Sequence MRAEISSLQRAQVQVESQLSSARRDEHRLRQQQRALEEQHSLLHAHSEQLQALYEQKTRELQELARKLQELADASENLLTENTWLKILVATMERKLEGRDGAESLAAQRE
Nucleotide Sequence CTGAGAGCAGAAATAAGCAGCCTCCAGCGAGCACAAGTGCAGGTGGAGTCCCAGCTCTCCAGTGCCCGCAGAGATGAGCACCGGCTGCGGCAGCAGCAGCGGGCCCTGGAAGAGCAGCACAGCCTGCTCCACGCACACAGTGAGCAGCTGCAGGCCCTCTATGAGCAGAAGACACGTGAGCTGCAGGAGCTGGCCCGCAAGCTGCAGGAGCTGGCCGATGCCTCAGAAAACCTCCTTACCGAGAACACGTGGCTCAAGATCCTGGTGGCGACCATGGAGAGGAAACTGGAGGGCAGGGATGGAGCTGAAAGCCTGGCGGCCCAGAGAGAG
CircID chr16:11679315|11679657
ORF Type ORF7
Protein Length 85
Nucleotide Length 255
Protein Sequence MSTGCGSSSGPWKSSTACSTHTVSSCRPSMSRRHVSCRSWPASCRSWPMPQKTSLPRTRGSRSWWRPWRGNWRAGMELKAWRPRE
Nucleotide Sequence ATGAGCACCGGCTGCGGCAGCAGCAGCGGGCCCTGGAAGAGCAGCACAGCCTGCTCCACGCACACAGTGAGCAGCTGCAGGCCCTCTATGAGCAGAAGACACGTGAGCTGCAGGAGCTGGCCCGCAAGCTGCAGGAGCTGGCCGATGCCTCAGAAAACCTCCTTACCGAGAACACGTGGCTCAAGATCCTGGTGGCGACCATGGAGAGGAAACTGGAGGGCAGGGATGGAGCTGAAAGCCTGGCGGCCCAGAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab