CircRNA Information

General Information
circRNA Basic Information
CircID chr16:11679506|11679659
Strand -
CircType exon
Host Gene ENSG00000153066.11;
Algorism CIRI2;
Sequence TGTGTGCGTGGAGCAGGCTGTGCTGCTCTTCCAGGGCCCGCTGCTGCTGCCGCAGCCGGTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATCTCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:11679506|11679659 hsa-miR-15a-5p 0 0 1
chr16:11679506|11679659 hsa-miR-15a-3p 0 0 1
chr16:11679506|11679659 hsa-miR-15b-5p 0 0 1
chr16:11679506|11679659 hsa-miR-15b-3p 0 0 1
chr16:11679506|11679659 hsa-miR-143-5p 0 0 1
chr16:11679506|11679659 hsa-miR-143-3p 0 0 1
chr16:11679506|11679659 hsa-miR-195-5p 0 0 1
chr16:11679506|11679659 hsa-miR-195-3p 0 0 1
chr16:11679506|11679659 hsa-miR-424-5p 0 0 1
chr16:11679506|11679659 hsa-miR-424-3p 0 0 1
chr16:11679506|11679659 hsa-miR-497-5p 0 0 1
chr16:11679506|11679659 hsa-miR-497-3p 0 0 1
chr16:11679506|11679659 hsa-miR-503-5p 0 0 1
chr16:11679506|11679659 hsa-miR-503-3p 0 0 1
chr16:11679506|11679659 hsa-miR-596 0 0 1
chr16:11679506|11679659 hsa-miR-604 0 1 1
chr16:11679506|11679659 hsa-miR-657 0 0 1
chr16:11679506|11679659 hsa-miR-766-5p 0 0 1
chr16:11679506|11679659 hsa-miR-766-3p 0 0 1
chr16:11679506|11679659 hsa-miR-1291 0 1 1
chr16:11679506|11679659 hsa-miR-1825 0 1 1
chr16:11679506|11679659 hsa-miR-199a-5p 0 0 1
chr16:11679506|11679659 hsa-miR-1289 0 1 1
chr16:11679506|11679659 hsa-miR-199b-5p 0 0 1
chr16:11679506|11679659 hsa-miR-519b-3p 0 0 1
chr16:11679506|11679659 hsa-miR-519c-3p 0 0 1
chr16:11679506|11679659 hsa-miR-16 0 0 1
chr16:11679506|11679659 hsa-miR-7 0 0 1
chr16:11679506|11679659 hsa-miR-519a 0 0 1
chr16:11679506|11679659 hsa-miR-640 1 0 0
chr16:11679506|11679659 hsa-miR-2278 0 1 0
chr16:11679506|11679659 hsa-miR-4467 1 0 0
chr16:11679506|11679659 hsa-miR-4468 0 1 0
chr16:11679506|11679659 hsa-miR-3960 1 1 0
chr16:11679506|11679659 hsa-miR-4721 1 0 0
chr16:11679506|11679659 hsa-miR-4739 1 0 0
chr16:11679506|11679659 hsa-miR-4770 0 1 0
chr16:11679506|11679659 hsa-miR-6077 0 1 0
chr16:11679506|11679659 hsa-miR-125b-2-3p 0 1 0
chr16:11679506|11679659 hsa-miR-4665-3p 1 0 0
chr16:11679506|11679659 hsa-miR-6820-5p 0 1 0
chr16:11679506|11679659 hsa-miR-6796-3p 0 1 0
chr16:11679506|11679659 hsa-miR-4738-3p 0 1 0
chr16:11679506|11679659 hsa-miR-4756-3p 0 1 0
chr16:11679506|11679659 hsa-miR-4713-3p 1 1 0
chr16:11679506|11679659 hsa-miR-371b-3p 0 1 0
chr16:11679506|11679659 hsa-miR-16-5p 0 1 0
chr16:11679506|11679659 hsa-miR-10400-5p 1 0 0
chr16:11679506|11679659 hsa-miR-4763-3p 1 0 0
chr16:11679506|11679659 hsa-miR-6875-5p 1 0 0
chr16:11679506|11679659 hsa-miR-6836-5p 1 0 0
chr16:11679506|11679659 hsa-miR-4436b-3p 0 1 0
chr16:11679506|11679659 hsa-miR-3198 0 1 0
chr16:11679506|11679659 hsa-miR-6856-5p 1 0 0
chr16:11679506|11679659 hsa-miR-7843-5p 0 1 0
chr16:11679506|11679659 hsa-miR-6529-5p 1 1 0
chr16:11679506|11679659 hsa-miR-6838-5p 0 1 0
chr16:11679506|11679659 hsa-miR-9902 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:11679506|11679659
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MLFQGPLLLPQPVLISAGTGELGLHLHLCSLEAAYFCSQFLDLS
Nucleotide Sequence CTGCTCTTCCAGGGCCCGCTGCTGCTGCCGCAGCCGGTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATCTCTCT
CircID chr16:11679506|11679659
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MCCSSRARCCCRSRCSSLRALESWDSTCTCARWRLLISALSFWIS
Nucleotide Sequence CTGTGCTGCTCTTCCAGGGCCCGCTGCTGCTGCCGCAGCCGGTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATCTCT
CircID chr16:11679506|11679659
ORF Type ORF3
Protein Length 46
Nucleotide Length 138
Protein Sequence MRAEISSLQRAQVQVESQLSSARRDEHRLRQQQRALEEQHSLLHAH
Nucleotide Sequence CTGAGAGCAGAAATAAGCAGCCTCCAGCGAGCACAAGTGCAGGTGGAGTCCCAGCTCTCCAGTGCCCGCAGAGATGAGCACCGGCTGCGGCAGCAGCAGCGGGCCCTGGAAGAGCAGCACAGCCTGCTCCACGCACAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab