CircRNA Information

General Information
circRNA Basic Information
CircID chr16:1326068|1326296
Strand -
CircType exon
Host Gene ENSG00000103275.17;
Algorism CIRI2;
Sequence TGCAGGAAGTGGCCTGGCTGGGAAGTTGGGTGCCGGTCACCTCCCAGCAGGAAGGCACAGTGGACAGAGATGGGAAGCCCTGGGGGACACAGCCCGGTGCTCCCAGCCCTCCAACCTCTGGCTCCCAACCCAGTCTCCCCATCCTAGCGAGCTTGGCCCTCCTCAGTTTCGTTTCAAGCCTTGGGGCTGGAGCTGGCCCTGCTGCCCTGGCACCCCCCGGTGGCTGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:1326068|1326296 hsa-miR-214-5p 0 0 1
chr16:1326068|1326296 hsa-miR-214-3p 0 0 1
chr16:1326068|1326296 hsa-miR-370-5p 0 0 1
chr16:1326068|1326296 hsa-miR-370-3p 0 0 1
chr16:1326068|1326296 hsa-miR-766-5p 0 0 1
chr16:1326068|1326296 hsa-miR-766-3p 0 0 1
chr16:1326068|1326296 hsa-miR-920 0 0 1
chr16:1326068|1326296 hsa-miR-939-5p 0 0 1
chr16:1326068|1326296 hsa-miR-939-3p 0 0 1
chr16:1326068|1326296 hsa-miR-1265 0 0 1
chr16:1326068|1326296 hsa-miR-361-3p 0 0 1
chr16:1326068|1326296 hsa-miR-342-5p 0 0 1
chr16:1326068|1326296 hsa-miR-550 0 0 1
chr16:1326068|1326296 hsa-miR-768-5p 0 0 1
chr16:1326068|1326296 hsa-miR-608 1 0 0
chr16:1326068|1326296 hsa-miR-612 1 0 0
chr16:1326068|1326296 hsa-miR-637 1 0 0
chr16:1326068|1326296 hsa-miR-658 1 0 0
chr16:1326068|1326296 hsa-miR-762 1 0 0
chr16:1326068|1326296 hsa-miR-4463 1 0 0
chr16:1326068|1326296 hsa-miR-4498 1 0 0
chr16:1326068|1326296 hsa-miR-2392 1 0 0
chr16:1326068|1326296 hsa-miR-4507 1 0 0
chr16:1326068|1326296 hsa-miR-4508 1 0 0
chr16:1326068|1326296 hsa-miR-1587 1 0 0
chr16:1326068|1326296 hsa-miR-4538 1 0 0
chr16:1326068|1326296 hsa-miR-4651 1 0 0
chr16:1326068|1326296 hsa-miR-4656 1 0 0
chr16:1326068|1326296 hsa-miR-4689 1 0 0
chr16:1326068|1326296 hsa-miR-4706 1 0 0
chr16:1326068|1326296 hsa-miR-4741 1 0 0
chr16:1326068|1326296 hsa-miR-5093 1 0 0
chr16:1326068|1326296 hsa-miR-5787 1 0 0
chr16:1326068|1326296 hsa-miR-6090 1 0 0
chr16:1326068|1326296 hsa-miR-8089 1 0 0
chr16:1326068|1326296 hsa-miR-6765-5p 1 0 0
chr16:1326068|1326296 hsa-miR-3150a-3p 1 0 0
chr16:1326068|1326296 hsa-miR-6825-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6894-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6857-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6720-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6799-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6728-5p 1 0 0
chr16:1326068|1326296 hsa-miR-5187-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6089 1 0 0
chr16:1326068|1326296 hsa-miR-6757-5p 1 0 0
chr16:1326068|1326296 hsa-miR-7160-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4655-5p 1 0 0
chr16:1326068|1326296 hsa-miR-8069 1 0 0
chr16:1326068|1326296 hsa-miR-6732-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6827-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6782-5p 1 0 0
chr16:1326068|1326296 hsa-miR-3194-5p 1 0 0
chr16:1326068|1326296 hsa-miR-5006-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4436b-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6786-5p 1 0 0
chr16:1326068|1326296 hsa-miR-1229-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4640-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6753-5p 1 0 0
chr16:1326068|1326296 hsa-miR-296-3p 1 0 0
chr16:1326068|1326296 hsa-miR-6771-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4787-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4446-3p 1 0 0
chr16:1326068|1326296 hsa-miR-937-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6877-5p 1 0 0
chr16:1326068|1326296 hsa-miR-664b-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6889-3p 1 0 0
chr16:1326068|1326296 hsa-miR-4763-3p 1 0 0
chr16:1326068|1326296 hsa-miR-6812-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6870-5p 1 0 0
chr16:1326068|1326296 hsa-miR-5001-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6726-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6752-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6756-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6803-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6819-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6842-5p 1 0 0
chr16:1326068|1326296 hsa-miR-1249-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6763-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6779-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6780a-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6797-5p 1 0 0
chr16:1326068|1326296 hsa-miR-3620-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4728-5p 1 0 0
chr16:1326068|1326296 hsa-miR-5196-5p 1 0 0
chr16:1326068|1326296 hsa-miR-328-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4685-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4726-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6794-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6795-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6848-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6858-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6887-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4758-5p 1 0 0
chr16:1326068|1326296 hsa-miR-4769-5p 1 0 0
chr16:1326068|1326296 hsa-miR-10394-3p 1 0 0
chr16:1326068|1326296 hsa-miR-3085-5p 1 0 0
chr16:1326068|1326296 hsa-miR-3940-5p 1 0 0
chr16:1326068|1326296 hsa-miR-30c-1-3p 1 0 0
chr16:1326068|1326296 hsa-miR-4646-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6762-5p 1 0 0
chr16:1326068|1326296 hsa-miR-6837-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:1326068|1326296
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MGSPGGHSPVLPALQPLAPNPVSPS
Nucleotide Sequence ATGGGAAGCCCTGGGGGACACAGCCCGGTGCTCCCAGCCCTCCAACCTCTGGCTCCCAACCCAGTCTCCCCATCCTAG
CircID chr16:1326068|1326296
ORF Type ORF2
Protein Length 72
Nucleotide Length 216
Protein Sequence MAGKLGAGHLPAGRHSGQRWEALGDTARCSQPSNLWLPTQSPHPSELGPPQFRFKPWGWSWPCCPGTPRWLE
Nucleotide Sequence CTGGCTGGGAAGTTGGGTGCCGGTCACCTCCCAGCAGGAAGGCACAGTGGACAGAGATGGGAAGCCCTGGGGGACACAGCCCGGTGCTCCCAGCCCTCCAACCTCTGGCTCCCAACCCAGTCTCCCCATCCTAGCGAGCTTGGCCCTCCTCAGTTTCGTTTCAAGCCTTGGGGCTGGAGCTGGCCCTGCTGCCCTGGCACCCCCCGGTGGCTGGAG
CircID chr16:1326068|1326296
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MGSWVPVTSQQEGTVDRDGKPWGTQPGAPSPPTSGSQPSLPILASLALLSFVSSLGAGAGPAALAPPGGW
Nucleotide Sequence CTGGGAAGTTGGGTGCCGGTCACCTCCCAGCAGGAAGGCACAGTGGACAGAGATGGGAAGCCCTGGGGGACACAGCCCGGTGCTCCCAGCCCTCCAACCTCTGGCTCCCAACCCAGTCTCCCCATCCTAGCGAGCTTGGCCCTCCTCAGTTTCGTTTCAAGCCTTGGGGCTGGAGCTGGCCCTGCTGCCCTGGCACCCCCCGGTGGCTGG
CircID chr16:1326068|1326296
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MRRAKLARMGRLGWEPEVGGLGAPGCVPQGFPSLSTVPSCWEVTGTQLPSQATSC
Nucleotide Sequence CTGAGGAGGGCCAAGCTCGCTAGGATGGGGAGACTGGGTTGGGAGCCAGAGGTTGGAGGGCTGGGAGCACCGGGCTGTGTCCCCCAGGGCTTCCCATCTCTGTCCACTGTGCCTTCCTGCTGGGAGGTGACCGGCACCCAACTTCCCAGCCAGGCCACTTCCTGC
CircID chr16:1326068|1326296
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MEGWEHRAVSPRASHLCPLCLPAGR
Nucleotide Sequence TTGGAGGGCTGGGAGCACCGGGCTGTGTCCCCCAGGGCTTCCCATCTCTGTCCACTGTGCCTTCCTGCTGGGAGGTGA
CircID chr16:1326068|1326296
ORF Type ORF6
Protein Length 42
Nucleotide Length 126
Protein Sequence MGARGWRAGSTGLCPPGLPISVHCAFLLGGDRHPTSQPGHFL
Nucleotide Sequence TTGGGAGCCAGAGGTTGGAGGGCTGGGAGCACCGGGCTGTGTCCCCCAGGGCTTCCCATCTCTGTCCACTGTGCCTTCCTGCTGGGAGGTGACCGGCACCCAACTTCCCAGCCAGGCCACTTCCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab