CircRNA Information

General Information
circRNA Basic Information
CircID chr16:1467433|1467590
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTCCACCTGGGAGGTGGGGGTCAGAGGCCCAGCGCTGGTCCCAGGGCTGTTTTCTGGTGGTGAGACCTGGAGTCCAGGGGCTTTGATGTGAGTGTGAGCAAGAGGGAGTGGGCAGCTGGCCAGGCCACTGCTTCCATCATGCCTGGACCGTGGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:1467433|1467590 hsa-miR-22-5p 0 0 1
chr16:1467433|1467590 hsa-miR-22-3p 0 0 1
chr16:1467433|1467590 hsa-miR-197-5p 0 0 1
chr16:1467433|1467590 hsa-miR-197-3p 0 0 1
chr16:1467433|1467590 hsa-miR-422a 0 1 1
chr16:1467433|1467590 hsa-miR-570-5p 0 0 1
chr16:1467433|1467590 hsa-miR-570-3p 0 0 1
chr16:1467433|1467590 hsa-miR-1178-5p 0 0 1
chr16:1467433|1467590 hsa-miR-1178-3p 0 0 1
chr16:1467433|1467590 hsa-miR-1227-5p 0 0 1
chr16:1467433|1467590 hsa-miR-1227-3p 0 0 1
chr16:1467433|1467590 hsa-miR-1229-5p 0 0 1
chr16:1467433|1467590 hsa-miR-1229-3p 0 0 1
chr16:1467433|1467590 hsa-miR-671-5p 0 0 1
chr16:1467433|1467590 hsa-miR-330-3p 0 0 1
chr16:1467433|1467590 hsa-miR-508-5p 0 1 1
chr16:1467433|1467590 hsa-miR-1224-3p 0 1 1
chr16:1467433|1467590 hsa-miR-331-3p 0 0 1
chr16:1467433|1467590 hsa-miR-342-3p 0 1 1
chr16:1467433|1467590 hsa-miR-220b 0 0 1
chr16:1467433|1467590 hsa-miR-642 0 0 1
chr16:1467433|1467590 hsa-miR-378 0 0 1
chr16:1467433|1467590 hsa-miR-601 0 1 0
chr16:1467433|1467590 hsa-miR-612 1 0 0
chr16:1467433|1467590 hsa-miR-661 0 1 0
chr16:1467433|1467590 hsa-miR-663b 1 0 0
chr16:1467433|1467590 hsa-miR-1248 1 0 0
chr16:1467433|1467590 hsa-miR-378c 0 1 0
chr16:1467433|1467590 hsa-miR-4292 1 1 0
chr16:1467433|1467590 hsa-miR-378e 0 1 0
chr16:1467433|1467590 hsa-miR-378h 0 1 0
chr16:1467433|1467590 hsa-miR-4469 1 1 0
chr16:1467433|1467590 hsa-miR-4519 0 1 0
chr16:1467433|1467590 hsa-miR-378i 0 1 0
chr16:1467433|1467590 hsa-miR-6079 0 1 0
chr16:1467433|1467590 hsa-miR-6081 1 1 0
chr16:1467433|1467590 hsa-miR-8058 0 1 0
chr16:1467433|1467590 hsa-miR-12121 0 1 0
chr16:1467433|1467590 hsa-miR-4435 1 1 0
chr16:1467433|1467590 hsa-miR-3677-5p 0 1 0
chr16:1467433|1467590 hsa-miR-6735-3p 1 0 0
chr16:1467433|1467590 hsa-miR-6882-3p 1 1 0
chr16:1467433|1467590 hsa-miR-939-3p 1 1 0
chr16:1467433|1467590 hsa-miR-4763-5p 1 0 0
chr16:1467433|1467590 hsa-miR-1908-3p 1 0 0
chr16:1467433|1467590 hsa-miR-7113-3p 1 0 0
chr16:1467433|1467590 hsa-miR-6818-3p 1 0 0
chr16:1467433|1467590 hsa-miR-3690 0 1 0
chr16:1467433|1467590 hsa-miR-4733-3p 1 0 0
chr16:1467433|1467590 hsa-miR-6769a-3p 0 1 0
chr16:1467433|1467590 hsa-miR-3190-5p 1 1 0
chr16:1467433|1467590 hsa-miR-1237-3p 1 0 0
chr16:1467433|1467590 hsa-miR-7106-3p 1 0 0
chr16:1467433|1467590 hsa-miR-2276-5p 1 0 0
chr16:1467433|1467590 hsa-miR-34a-5p 0 1 0
chr16:1467433|1467590 hsa-miR-6856-3p 0 1 0
chr16:1467433|1467590 hsa-miR-5088-3p 1 0 0
chr16:1467433|1467590 hsa-miR-6859-3p 0 1 0
chr16:1467433|1467590 hsa-miR-4750-3p 0 1 0
chr16:1467433|1467590 hsa-miR-3127-3p 1 0 0
chr16:1467433|1467590 hsa-miR-4685-3p 1 0 0
chr16:1467433|1467590 hsa-miR-449c-5p 0 1 0
chr16:1467433|1467590 hsa-miR-378a-3p 0 1 0
chr16:1467433|1467590 hsa-miR-6791-5p 0 1 0
chr16:1467433|1467590 hsa-miR-4757-5p 0 1 0
chr16:1467433|1467590 hsa-miR-6862-3p 1 0 0
chr16:1467433|1467590 hsa-miR-10400-3p 1 0 0
chr16:1467433|1467590 hsa-miR-11181-5p 0 1 0
chr16:1467433|1467590 hsa-miR-6511b-3p 1 1 0
chr16:1467433|1467590 hsa-miR-6819-3p 1 1 0
chr16:1467433|1467590 hsa-miR-23b-3p 1 0 0
chr16:1467433|1467590 hsa-miR-378d 0 1 0
chr16:1467433|1467590 hsa-miR-200a-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:1467433|1467590
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence LSTWEVGVRGPALVPGLFSGGETWSPGALM
Nucleotide Sequence CTGTCCACCTGGGAGGTGGGGGTCAGAGGCCCAGCGCTGGTCCCAGGGCTGTTTTCTGGTGGTGAGACCTGGAGTCCAGGGGCTTTGATGTGA

CircID chr16:1467433|1467590
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MESRGFDVSVSKREWAAGQATASIMPGPWH
Nucleotide Sequence CTGGAGTCCAGGGGCTTTGATGTGAGTGTGAGCAAGAGGGAGTGGGCAGCTGGCCAGGCCACTGCTTCCATCATGCCTGGACCGTGGCAC

CircID chr16:1467433|1467590
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MASCPLPLAHTHIKAPGLQVSPPENSPGTSAGPLTPTSQVD
Nucleotide Sequence CTGGCCAGCTGCCCACTCCCTCTTGCTCACACTCACATCAAAGCCCCTGGACTCCAGGTCTCACCACCAGAAAACAGCCCTGGGACCAGCGCTGGGCCTCTGACCCCCACCTCCCAGGTGGAC

CircID chr16:1467433|1467590
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MMEAVAWPAAHSLLLTLTSKPLDSRSHHQKTALGPALGL
Nucleotide Sequence ATGATGGAAGCAGTGGCCTGGCCAGCTGCCCACTCCCTCTTGCTCACACTCACATCAAAGCCCCTGGACTCCAGGTCTCACCACCAGAAAACAGCCCTGGGACCAGCGCTGGGCCTCTGA

CircID chr16:1467433|1467590
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MPTPSCSHSHQSPWTPGLTTRKQPWDQRWASDPHLPGGQ
Nucleotide Sequence CTGCCCACTCCCTCTTGCTCACACTCACATCAAAGCCCCTGGACTCCAGGTCTCACCACCAGAAAACAGCCCTGGGACCAGCGCTGGGCCTCTGACCCCCACCTCCCAGGTGGACAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites