CircRNA Information

General Information
circRNA Basic Information
CircID chr16:15724402|15724540
Strand +
CircType exon
Host Gene ENSG00000072864.11;
Algorism CIRI2;
Sequence CCCCCAGCTTCCCCTGCTATTGGGTTTCTCCAACGAGGAGACATGGTCTTCGCTTCTCAGAGTCTGTGGGGCCAGGGACAGGGGCCACTCATGGTCCCCCTCTCACCCTACCCTGGACGCTGTCCTTGTAGCTCTCCGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:15724402|15724540 hsa-miR-591 0 1 1
chr16:15724402|15724540 hsa-miR-620 0 0 1
chr16:15724402|15724540 hsa-miR-624-5p 0 0 1
chr16:15724402|15724540 hsa-miR-624-3p 0 0 1
chr16:15724402|15724540 hsa-miR-637 0 0 1
chr16:15724402|15724540 hsa-miR-663b 0 1 1
chr16:15724402|15724540 hsa-miR-1253 0 0 1
chr16:15724402|15724540 hsa-miR-1270 0 0 1
chr16:15724402|15724540 hsa-miR-1306-5p 0 0 1
chr16:15724402|15724540 hsa-miR-1306-3p 0 0 1
chr16:15724402|15724540 hsa-miR-339-5p 0 0 1
chr16:15724402|15724540 hsa-miR-1300 0 0 1
chr16:15724402|15724540 hsa-miR-611 1 0 0
chr16:15724402|15724540 hsa-miR-760 1 0 0
chr16:15724402|15724540 hsa-miR-3131 1 0 0
chr16:15724402|15724540 hsa-miR-3138 1 0 0
chr16:15724402|15724540 hsa-miR-3978 1 0 0
chr16:15724402|15724540 hsa-miR-4721 1 1 0
chr16:15724402|15724540 hsa-miR-5192 1 0 0
chr16:15724402|15724540 hsa-miR-8080 0 1 0
chr16:15724402|15724540 hsa-miR-8085 1 0 0
chr16:15724402|15724540 hsa-miR-211-3p 1 0 0
chr16:15724402|15724540 hsa-miR-210-5p 0 1 0
chr16:15724402|15724540 hsa-miR-187-5p 0 1 0
chr16:15724402|15724540 hsa-miR-6510-5p 0 1 0
chr16:15724402|15724540 hsa-miR-3677-5p 0 1 0
chr16:15724402|15724540 hsa-miR-874-5p 0 1 0
chr16:15724402|15724540 hsa-miR-6742-5p 1 0 0
chr16:15724402|15724540 hsa-miR-6796-5p 1 0 0
chr16:15724402|15724540 hsa-miR-6786-5p 1 0 0
chr16:15724402|15724540 hsa-miR-185-5p 1 0 0
chr16:15724402|15724540 hsa-miR-2277-3p 0 1 0
chr16:15724402|15724540 hsa-miR-1229-5p 1 1 0
chr16:15724402|15724540 hsa-miR-6818-3p 0 1 0
chr16:15724402|15724540 hsa-miR-149-3p 1 0 0
chr16:15724402|15724540 hsa-miR-6824-5p 0 1 0
chr16:15724402|15724540 hsa-miR-3619-3p 0 1 0
chr16:15724402|15724540 hsa-miR-6748-3p 0 1 0
chr16:15724402|15724540 hsa-miR-514a-5p 0 1 0
chr16:15724402|15724540 hsa-miR-548ao-3p 0 1 0
chr16:15724402|15724540 hsa-miR-1207-5p 0 1 0
chr16:15724402|15724540 hsa-miR-6812-5p 1 1 0
chr16:15724402|15724540 hsa-miR-6870-5p 1 1 0
chr16:15724402|15724540 hsa-miR-1343-5p 1 0 0
chr16:15724402|15724540 hsa-miR-6756-5p 1 1 0
chr16:15724402|15724540 hsa-miR-6819-5p 1 0 0
chr16:15724402|15724540 hsa-miR-6722-3p 0 1 0
chr16:15724402|15724540 hsa-miR-328-5p 0 1 0
chr16:15724402|15724540 hsa-miR-4632-5p 1 1 0
chr16:15724402|15724540 hsa-miR-6777-5p 1 0 0
chr16:15724402|15724540 hsa-miR-6794-5p 0 1 0
chr16:15724402|15724540 hsa-miR-6795-5p 0 1 0
chr16:15724402|15724540 hsa-miR-939-5p 1 0 0
chr16:15724402|15724540 hsa-miR-1238-5p 0 1 0
chr16:15724402|15724540 hsa-miR-6736-5p 1 0 0
chr16:15724402|15724540 hsa-miR-6766-5p 1 0 0
chr16:15724402|15724540 hsa-miR-10392-3p 0 1 0
chr16:15724402|15724540 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:15724402|15724540
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MVFASQSLWGQGQGPLMVPLSPYPGRCPCSSP
Nucleotide Sequence ATGGTCTTCGCTTCTCAGAGTCTGTGGGGCCAGGGACAGGGGCCACTCATGGTCCCCCTCTCACCCTACCCTGGACGCTGTCCTTGTAGCTCTCCG
CircID chr16:15724402|15724540
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MLLGFSNEETWSSLLRVCGARDRGHSWSPSHPTLDAVLVALR
Nucleotide Sequence CTGCTATTGGGTTTCTCCAACGAGGAGACATGGTCTTCGCTTCTCAGAGTCTGTGGGGCCAGGGACAGGGGCCACTCATGGTCCCCCTCTCACCCTACCCTGGACGCTGTCCTTGTAGCTCTCCGA
CircID chr16:15724402|15724540
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MSLAPQTLRSEDHVSSLEKPNSRGSWG
Nucleotide Sequence CTGTCCCTGGCCCCACAGACTCTGAGAAGCGAAGACCATGTCTCCTCGTTGGAGAAACCCAATAGCAGGGGAAGCTGGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab