CircRNA Information

General Information
circRNA Basic Information
CircID chr16:15732684|15735470
Strand -
CircType exon
Host Gene ENSG00000133392.15;
Algorism CIRI2;
Sequence CGTCACCTCCTGCTCCCTCTTGGCCCTGAGCTCCTGCTGAGTGGCTGTGCTGTCCAGTGTGTCTTCCAGCTCTGTCTTTAGGGCCTCCAGCTCCTCGCCGAGGTCTCGCTTCTGCTTTTCAGCCTTGTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:15732684|15735470 hsa-miR-214-5p 0 0 1
chr16:15732684|15735470 hsa-miR-214-3p 0 0 1
chr16:15732684|15735470 hsa-miR-603 0 0 1
chr16:15732684|15735470 hsa-miR-650 0 0 1
chr16:15732684|15735470 hsa-miR-298 1 1 1
chr16:15732684|15735470 hsa-miR-708-5p 0 0 1
chr16:15732684|15735470 hsa-miR-708-3p 0 0 1
chr16:15732684|15735470 hsa-miR-922 0 0 1
chr16:15732684|15735470 hsa-miR-1266-5p 0 0 1
chr16:15732684|15735470 hsa-miR-1266-3p 0 0 1
chr16:15732684|15735470 hsa-miR-1307-5p 0 0 1
chr16:15732684|15735470 hsa-miR-1307-3p 0 0 1
chr16:15732684|15735470 hsa-miR-512-5p 0 0 1
chr16:15732684|15735470 hsa-miR-769-5p 0 1 1
chr16:15732684|15735470 hsa-miR-28-5p 0 1 1
chr16:15732684|15735470 hsa-miR-151-5p 0 0 1
chr16:15732684|15735470 hsa-miR-7 0 0 1
chr16:15732684|15735470 hsa-miR-641 0 1 0
chr16:15732684|15735470 hsa-miR-151b 0 1 0
chr16:15732684|15735470 hsa-miR-762 1 0 0
chr16:15732684|15735470 hsa-miR-1291 1 0 0
chr16:15732684|15735470 hsa-miR-1469 1 0 0
chr16:15732684|15735470 hsa-miR-2861 1 0 0
chr16:15732684|15735470 hsa-miR-3138 1 0 0
chr16:15732684|15735470 hsa-miR-3139 0 1 0
chr16:15732684|15735470 hsa-miR-4291 0 1 0
chr16:15732684|15735470 hsa-miR-3665 1 0 0
chr16:15732684|15735470 hsa-miR-3918 1 1 0
chr16:15732684|15735470 hsa-miR-3929 0 1 0
chr16:15732684|15735470 hsa-miR-4437 0 1 0
chr16:15732684|15735470 hsa-miR-3135b 1 0 0
chr16:15732684|15735470 hsa-miR-4479 1 0 0
chr16:15732684|15735470 hsa-miR-4487 0 1 0
chr16:15732684|15735470 hsa-miR-4510 0 1 0
chr16:15732684|15735470 hsa-miR-4656 1 0 0
chr16:15732684|15735470 hsa-miR-4706 1 0 0
chr16:15732684|15735470 hsa-miR-6085 1 0 0
chr16:15732684|15735470 hsa-miR-6127 0 1 0
chr16:15732684|15735470 hsa-miR-6129 0 1 0
chr16:15732684|15735470 hsa-miR-6133 0 1 0
chr16:15732684|15735470 hsa-miR-6165 0 1 0
chr16:15732684|15735470 hsa-miR-4731-5p 1 0 0
chr16:15732684|15735470 hsa-miR-671-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6854-5p 0 1 0
chr16:15732684|15735470 hsa-miR-6089 1 0 0
chr16:15732684|15735470 hsa-miR-6873-5p 0 1 0
chr16:15732684|15735470 hsa-miR-4722-5p 0 1 0
chr16:15732684|15735470 hsa-miR-6727-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6881-5p 1 0 0
chr16:15732684|15735470 hsa-miR-2467-3p 1 0 0
chr16:15732684|15735470 hsa-miR-6874-5p 1 0 0
chr16:15732684|15735470 hsa-miR-5008-5p 1 1 0
chr16:15732684|15735470 hsa-miR-5088-5p 1 0 0
chr16:15732684|15735470 hsa-miR-4640-5p 1 1 0
chr16:15732684|15735470 hsa-miR-4691-3p 0 1 0
chr16:15732684|15735470 hsa-miR-3127-5p 1 1 0
chr16:15732684|15735470 hsa-miR-4638-3p 1 1 0
chr16:15732684|15735470 hsa-miR-4446-3p 0 1 0
chr16:15732684|15735470 hsa-miR-6877-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6895-5p 1 1 0
chr16:15732684|15735470 hsa-miR-664b-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6792-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6790-3p 0 1 0
chr16:15732684|15735470 hsa-miR-4520-3p 0 1 0
chr16:15732684|15735470 hsa-miR-1233-5p 1 0 0
chr16:15732684|15735470 hsa-miR-1343-5p 1 0 0
chr16:15732684|15735470 hsa-miR-5001-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6726-5p 1 1 0
chr16:15732684|15735470 hsa-miR-6722-3p 1 0 0
chr16:15732684|15735470 hsa-miR-3620-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6836-5p 1 0 0
chr16:15732684|15735470 hsa-miR-4649-5p 1 0 0
chr16:15732684|15735470 hsa-miR-4685-5p 1 1 0
chr16:15732684|15735470 hsa-miR-4726-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6729-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6735-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6794-5p 0 1 0
chr16:15732684|15735470 hsa-miR-6889-5p 1 1 0
chr16:15732684|15735470 hsa-miR-4436b-3p 1 0 0
chr16:15732684|15735470 hsa-miR-6845-5p 1 0 0
chr16:15732684|15735470 hsa-miR-939-5p 1 1 0
chr16:15732684|15735470 hsa-miR-1910-3p 0 1 0
chr16:15732684|15735470 hsa-miR-6511a-5p 1 1 0
chr16:15732684|15735470 hsa-miR-6758-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6762-5p 1 0 0
chr16:15732684|15735470 hsa-miR-6837-5p 1 1 0
chr16:15732684|15735470 hsa-miR-6884-5p 0 1 0
chr16:15732684|15735470 hsa-miR-151a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:15732684|15735470
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MSSVSSSSVFRASSSSPRSRFCFSALF
Nucleotide Sequence CTGTCCAGTGTGTCTTCCAGCTCTGTCTTTAGGGCCTCCAGCTCCTCGCCGAGGTCTCGCTTCTGCTTTTCAGCCTTGTTC
CircID chr16:15732684|15735470
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MCCPVCLPALSLGPPAPRRGLASAFQPC
Nucleotide Sequence CTGTGCTGTCCAGTGTGTCTTCCAGCTCTGTCTTTAGGGCCTCCAGCTCCTCGCCGAGGTCTCGCTTCTGCTTTTCAGCCTTGT
CircID chr16:15732684|15735470
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MEALKTELEDTLDSTATQQELRAKREQEVT
Nucleotide Sequence CTGGAGGCCCTAAAGACAGAGCTGGAAGACACACTGGACAGCACAGCCACTCAGCAGGAGCTCAGGGCCAAGAGGGAGCAGGAGGTGACG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab