CircRNA Information

General Information
circRNA Basic Information
CircID chr16:15737449|15737588
Strand -
CircType exon
Host Gene ENSG00000133392.15;
Algorism CIRI2;
Sequence CTGGCCAGGGCCGCCTGCAGCTCCTCCTCCTTCTTGGCCAGCTGCATCTTGAGCTCTGCGATCTGCGCCTGGAGGTCAGCGATCTGCTCGTGGAAGTCGCTGGCATCACCCTCCAGCTTCCGTTTCAGCTTCTCCAGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:15737449|15737588 hsa-miR-191-5p 0 0 1
chr16:15737449|15737588 hsa-miR-191-3p 0 0 1
chr16:15737449|15737588 hsa-miR-558 0 0 1
chr16:15737449|15737588 hsa-miR-617 0 0 1
chr16:15737449|15737588 hsa-miR-1301-5p 0 0 1
chr16:15737449|15737588 hsa-miR-1301-3p 0 0 1
chr16:15737449|15737588 hsa-miR-765 1 1 1
chr16:15737449|15737588 hsa-miR-708-5p 0 0 1
chr16:15737449|15737588 hsa-miR-708-3p 0 0 1
chr16:15737449|15737588 hsa-miR-1202 0 0 1
chr16:15737449|15737588 hsa-miR-1205 0 0 1
chr16:15737449|15737588 hsa-miR-1291 0 0 1
chr16:15737449|15737588 hsa-miR-28-5p 0 0 1
chr16:15737449|15737588 hsa-miR-1207-3p 0 1 1
chr16:15737449|15737588 hsa-miR-638 1 0 0
chr16:15737449|15737588 hsa-miR-3196 1 0 0
chr16:15737449|15737588 hsa-miR-3937 0 1 0
chr16:15737449|15737588 hsa-miR-3135b 0 1 0
chr16:15737449|15737588 hsa-miR-3972 0 1 0
chr16:15737449|15737588 hsa-miR-4688 1 0 0
chr16:15737449|15737588 hsa-miR-4739 1 1 0
chr16:15737449|15737588 hsa-miR-4767 0 1 0
chr16:15737449|15737588 hsa-miR-5703 0 1 0
chr16:15737449|15737588 hsa-miR-6077 1 0 0
chr16:15737449|15737588 hsa-miR-12118 0 1 0
chr16:15737449|15737588 hsa-miR-6765-5p 0 1 0
chr16:15737449|15737588 hsa-miR-671-5p 1 0 0
chr16:15737449|15737588 hsa-miR-7106-5p 1 0 0
chr16:15737449|15737588 hsa-miR-6894-5p 1 0 0
chr16:15737449|15737588 hsa-miR-766-5p 1 0 0
chr16:15737449|15737588 hsa-miR-6515-5p 0 1 0
chr16:15737449|15737588 hsa-miR-6880-5p 1 0 0
chr16:15737449|15737588 hsa-miR-4695-5p 1 0 0
chr16:15737449|15737588 hsa-miR-4722-5p 1 0 0
chr16:15737449|15737588 hsa-miR-7154-3p 1 0 0
chr16:15737449|15737588 hsa-miR-1292-5p 1 0 0
chr16:15737449|15737588 hsa-miR-3180-3p 1 0 0
chr16:15737449|15737588 hsa-miR-6732-5p 1 0 0
chr16:15737449|15737588 hsa-miR-6798-5p 1 0 0
chr16:15737449|15737588 hsa-miR-3934-3p 1 1 0
chr16:15737449|15737588 hsa-miR-4640-5p 1 0 0
chr16:15737449|15737588 hsa-miR-3944-5p 1 1 0
chr16:15737449|15737588 hsa-miR-3670 0 1 0
chr16:15737449|15737588 hsa-miR-6778-5p 1 0 0
chr16:15737449|15737588 hsa-miR-6726-5p 0 1 0
chr16:15737449|15737588 hsa-miR-6743-5p 1 0 0
chr16:15737449|15737588 hsa-miR-6851-5p 1 0 0
chr16:15737449|15737588 hsa-miR-11181-3p 1 1 0
chr16:15737449|15737588 hsa-miR-7111-5p 1 0 0
chr16:15737449|15737588 hsa-miR-6729-5p 1 0 0
chr16:15737449|15737588 hsa-miR-6858-5p 1 1 0
chr16:15737449|15737588 hsa-miR-939-5p 1 0 0
chr16:15737449|15737588 hsa-miR-6856-5p 1 0 0
chr16:15737449|15737588 hsa-miR-3173-3p 1 1 0
chr16:15737449|15737588 hsa-miR-6891-5p 1 1 0
chr16:15737449|15737588 hsa-miR-6884-5p 1 1 0
chr16:15737449|15737588 hsa-miR-10394-5p 0 1 0
chr16:15737449|15737588 hsa-miR-520e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:15737449|15737588
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence LARAACSSSSFLASCILSSAICAWRSAICSWKSLASPSSFRFSFSS
Nucleotide Sequence CTGGCCAGGGCCGCCTGCAGCTCCTCCTCCTTCTTGGCCAGCTGCATCTTGAGCTCTGCGATCTGCGCCTGGAGGTCAGCGATCTGCTCGTGGAAGTCGCTGGCATCACCCTCCAGCTTCCGTTTCAGCTTCTCCAGC
CircID chr16:15737449|15737588
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MRSAPGGQRSARGSRWHHPPASVSASPA
Nucleotide Sequence CTGCGATCTGCGCCTGGAGGTCAGCGATCTGCTCGTGGAAGTCGCTGGCATCACCCTCCAGCTTCCGTTTCAGCTTCTCCAGCT
CircID chr16:15737449|15737588
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MQLLLLLGQLHLELCDLRLEVSDLLVEVAGITLQLPFQLLQL
Nucleotide Sequence CTGCAGCTCCTCCTCCTTCTTGGCCAGCTGCATCTTGAGCTCTGCGATCTGCGCCTGGAGGTCAGCGATCTGCTCGTGGAAGTCGCTGGCATCACCCTCCAGCTTCCGTTTCAGCTTCTCCAGCTC
CircID chr16:15737449|15737588
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALA
Nucleotide Sequence CTGGAGAAGCTGAAACGGAAGCTGGAGGGTGATGCCAGCGACTTCCACGAGCAGATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAGCTGGCCAAGAAGGAGGAGGAGCTGCAGGCGGCCCTGGCC
CircID chr16:15737449|15737588
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MPATSTSRSLTSRRRSQSSRCSWPRRRRSCRRPWP
Nucleotide Sequence ATGCCAGCGACTTCCACGAGCAGATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAGCTGGCCAAGAAGGAGGAGGAGCTGCAGGCGGCCCTGGCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab