CircRNA Information

General Information
circRNA Basic Information
CircID chr16:15741592|15741816
Strand -
CircType exon
Host Gene ENSG00000133392.15;
Algorism CIRI2;
Sequence CCGCATCTCCTCAGCCTCTGCATACAGCTCTGTCTCTGCCTGCAGCTGTTCCTGTAGCAGGTTCTTCTCCTCGGTCAGCTGCACGCAGGTGGTGGGGAGGAGGCGGGTGAGCCCCACGGGGCCAAGTCCTGTTCCCCAGCAACCCCAGCCATGCATCCATACAGGTACCTGCGAGTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:15741592|15741816 hsa-miR-221-5p 0 0 1
chr16:15741592|15741816 hsa-miR-221-3p 0 0 1
chr16:15741592|15741816 hsa-miR-222-5p 0 0 1
chr16:15741592|15741816 hsa-miR-222-3p 0 0 1
chr16:15741592|15741816 hsa-miR-328-5p 0 0 1
chr16:15741592|15741816 hsa-miR-328-3p 0 0 1
chr16:15741592|15741816 hsa-miR-1301-5p 0 0 1
chr16:15741592|15741816 hsa-miR-1301-3p 0 0 1
chr16:15741592|15741816 hsa-miR-298 1 0 1
chr16:15741592|15741816 hsa-miR-708-5p 0 0 1
chr16:15741592|15741816 hsa-miR-708-3p 0 0 1
chr16:15741592|15741816 hsa-miR-873-5p 0 0 1
chr16:15741592|15741816 hsa-miR-873-3p 0 0 1
chr16:15741592|15741816 hsa-miR-922 0 0 1
chr16:15741592|15741816 hsa-miR-1205 0 0 1
chr16:15741592|15741816 hsa-miR-1246 0 0 1
chr16:15741592|15741816 hsa-miR-1253 1 0 1
chr16:15741592|15741816 hsa-miR-1281 0 0 1
chr16:15741592|15741816 hsa-miR-485-5p 0 0 1
chr16:15741592|15741816 hsa-miR-28-5p 0 0 1
chr16:15741592|15741816 hsa-miR-556-5p 0 0 1
chr16:15741592|15741816 hsa-miR-548b-3p 0 0 1
chr16:15741592|15741816 hsa-miR-151-5p 0 0 1
chr16:15741592|15741816 hsa-miR-220b 0 0 1
chr16:15741592|15741816 hsa-miR-637 1 0 0
chr16:15741592|15741816 hsa-miR-648 1 0 0
chr16:15741592|15741816 hsa-miR-650 1 0 0
chr16:15741592|15741816 hsa-miR-762 1 0 0
chr16:15741592|15741816 hsa-miR-920 1 0 0
chr16:15741592|15741816 hsa-miR-936 1 0 0
chr16:15741592|15741816 hsa-miR-3139 1 0 0
chr16:15741592|15741816 hsa-miR-3154 1 0 0
chr16:15741592|15741816 hsa-miR-3175 1 0 0
chr16:15741592|15741816 hsa-miR-3196 1 0 0
chr16:15741592|15741816 hsa-miR-3612 1 0 0
chr16:15741592|15741816 hsa-miR-3665 1 0 0
chr16:15741592|15741816 hsa-miR-4428 1 0 0
chr16:15741592|15741816 hsa-miR-3135b 1 0 0
chr16:15741592|15741816 hsa-miR-4498 1 0 0
chr16:15741592|15741816 hsa-miR-4505 1 0 0
chr16:15741592|15741816 hsa-miR-3960 1 0 0
chr16:15741592|15741816 hsa-miR-4688 1 0 0
chr16:15741592|15741816 hsa-miR-4689 1 0 0
chr16:15741592|15741816 hsa-miR-4706 1 0 0
chr16:15741592|15741816 hsa-miR-5093 1 0 0
chr16:15741592|15741816 hsa-miR-5787 1 0 0
chr16:15741592|15741816 hsa-miR-6085 1 0 0
chr16:15741592|15741816 hsa-miR-6125 1 0 0
chr16:15741592|15741816 hsa-miR-6132 1 0 0
chr16:15741592|15741816 hsa-miR-6165 1 0 0
chr16:15741592|15741816 hsa-miR-8072 1 0 0
chr16:15741592|15741816 hsa-miR-8089 1 0 0
chr16:15741592|15741816 hsa-miR-4700-3p 1 0 0
chr16:15741592|15741816 hsa-miR-25-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6510-5p 1 0 0
chr16:15741592|15741816 hsa-miR-4695-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6820-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6741-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6806-5p 1 0 0
chr16:15741592|15741816 hsa-miR-8069 1 0 0
chr16:15741592|15741816 hsa-miR-6776-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6716-5p 1 0 0
chr16:15741592|15741816 hsa-miR-23a-5p 1 0 0
chr16:15741592|15741816 hsa-miR-2467-3p 1 0 0
chr16:15741592|15741816 hsa-miR-6874-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6821-5p 1 0 0
chr16:15741592|15741816 hsa-miR-1226-5p 1 0 0
chr16:15741592|15741816 hsa-miR-885-3p 1 0 0
chr16:15741592|15741816 hsa-miR-296-3p 1 0 0
chr16:15741592|15741816 hsa-miR-877-5p 1 0 0
chr16:15741592|15741816 hsa-miR-4732-5p 1 0 0
chr16:15741592|15741816 hsa-miR-3616-3p 1 0 0
chr16:15741592|15741816 hsa-miR-605-3p 1 0 0
chr16:15741592|15741816 hsa-miR-1207-5p 1 0 0
chr16:15741592|15741816 hsa-miR-4763-3p 1 0 0
chr16:15741592|15741816 hsa-miR-6812-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6816-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6865-5p 1 0 0
chr16:15741592|15741816 hsa-miR-1343-5p 1 0 0
chr16:15741592|15741816 hsa-miR-5001-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6726-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6743-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6756-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6813-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6851-5p 1 0 0
chr16:15741592|15741816 hsa-miR-1249-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6797-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6808-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6879-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6780b-5p 1 0 0
chr16:15741592|15741816 hsa-miR-449c-5p 1 0 0
chr16:15741592|15741816 hsa-miR-4632-5p 1 0 0
chr16:15741592|15741816 hsa-miR-4685-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6735-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6738-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6777-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6858-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6831-5p 1 0 0
chr16:15741592|15741816 hsa-miR-939-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6511a-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6511b-5p 1 0 0
chr16:15741592|15741816 hsa-miR-6855-5p 1 0 0
chr16:15741592|15741816 hsa-miR-10392-3p 1 0 0
chr16:15741592|15741816 hsa-miR-6500-5p 1 0 0
chr16:15741592|15741816 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:15741592|15741816
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MHAGGGEEAGEPHGAKSCSPATPAMHPYRYLRVLLFQLLKLILCLLLPL
Nucleotide Sequence CTGCACGCAGGTGGTGGGGAGGAGGCGGGTGAGCCCCACGGGGCCAAGTCCTGTTCCCCAGCAACCCCAGCCATGCATCCATACAGGTACCTGCGAGTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTC
CircID chr16:15741592|15741816
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MHTALSLPAAVPVAGSSPRSAARRWWGGGG
Nucleotide Sequence CTGCATACAGCTCTGTCTCTGCCTGCAGCTGTTCCTGTAGCAGGTTCTTCTCCTCGGTCAGCTGCACGCAGGTGGTGGGGAGGAGGCGGGTGA
CircID chr16:15741592|15741816
ORF Type ORF3
Protein Length 63
Nucleotide Length 189
Protein Sequence MEQKHSQVPVWMHGWGCWGTGLGPVGLTRLLPTTCVQLTEEKNLLQEQLQAETELYAEAEEMR
Nucleotide Sequence CTGGAACAGAAGCACTCGCAGGTACCTGTATGGATGCATGGCTGGGGTTGCTGGGGAACAGGACTTGGCCCCGTGGGGCTCACCCGCCTCCTCCCCACCACCTGCGTGCAGCTGACCGAGGAGAAGAACCTGCTACAGGAACAGCTGCAGGCAGAGACAGAGCTGTATGCAGAGGCTGAGGAGATGCGG
CircID chr16:15741592|15741816
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MSLRSWNRSTRRYLYGCMAGVAGEQDLAPWGSPASSPPPACS
Nucleotide Sequence ATGAGCTTAAGGAGCTGGAACAGAAGCACTCGCAGGTACCTGTATGGATGCATGGCTGGGGTTGCTGGGGAACAGGACTTGGCCCCGTGGGGCTCACCCGCCTCCTCCCCACCACCTGCGTGCAGCTGA
CircID chr16:15741592|15741816
ORF Type ORF5
Protein Length 49
Nucleotide Length 150
Protein Sequence MDAWLGLLGNRTWPRGAHPPPPHHLRAADRGEEPATGTAAGRDRAVCRG
Nucleotide Sequence ATGGATGCATGGCTGGGGTTGCTGGGGAACAGGACTTGGCCCCGTGGGGCTCACCCGCCTCCTCCCCACCACCTGCGTGCAGCTGACCGAGGAGAAGAACCTGCTACAGGAACAGCTGCAGGCAGAGACAGAGCTGTATGCAGAGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab