CircNet

General Information

circRNA Basic Information

CircID	chr16:19564851\|19573241
Strand	+
CircType	exon
Host Gene	ENSG00000103544.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCACTCCAGGAATAGGAACTACAAAGCTGAATTTGCATCATGCCGACTGGAGGCTGTACCATTGGAGTTTGGGGACTATCACCCTCTGAAACCCATAACTGTCACAGAGTCAAAGACAAAGAAAGTGAACCGGAAAGGAAGCACTTCTTCCACGTCCTCCTCCTCCTCCAGCTCCGTGGTGGACCCGCTGAGCAGCGTCCTCGATGGGACTGACCCCCTCTCCATGTTTGCAGCCACTGCTGACCCCGCAGCCTTGGCAGCTGCCATGGACAGCTCCAGAAGGAAACGTGATAGAGATGATAACTCCGTTGTAGGATCGGATTTTGAGCCTTGGACCAACAAACGGGGAGAAATCCTTGCCCGGTACACCACTACCGAAAAGCTGTCTATT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:19564851\|19573241	hsa-miR-150-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:19564851\|19573241
ORF Type	ORF1
Protein Length	63
Nucleotide Length	189
Protein Sequence	MAAAKAAGSAVAANMERGSVPSRTLLSGSTTELEEEEDVEEVLPFRFTFFVFDSVTVMGFRG*
Nucleotide Sequence	ATGGCAGCTGCCAAGGCTGCGGGGTCAGCAGTGGCTGCAAACATGGAGAGGGGGTCAGTCCCATCGAGGACGCTGCTCAGCGGGTCCACCACGGAGCTGGAGGAGGAGGAGGACGTGGAAGAAGTGCTTCCTTTCCGGTTCACTTTCTTTGTCTTTGACTCTGTGACAGTTATGGGTTTCAGAGGGTGA

CircID	chr16:19564851\|19573241
ORF Type	ORF2
Protein Length	110
Nucleotide Length	330
Protein Sequence	LEFGDYHPLKPITVTESKTKKVNRKGSTSSTSSSSSSSVVDPLSSVLDGTDPLSMFAATADPAALAAAMDSSRRKRDRDDNSVVGSDFEPWTNKRGEILARYTTTEKLSI
Nucleotide Sequence	TTGGAGTTTGGGGACTATCACCCTCTGAAACCCATAACTGTCACAGAGTCAAAGACAAAGAAAGTGAACCGGAAAGGAAGCACTTCTTCCACGTCCTCCTCCTCCTCCAGCTCCGTGGTGGACCCGCTGAGCAGCGTCCTCGATGGGACTGACCCCCTCTCCATGTTTGCAGCCACTGCTGACCCCGCAGCCTTGGCAGCTGCCATGGACAGCTCCAGAAGGAAACGTGATAGAGATGATAACTCCGTTGTAGGATCGGATTTTGAGCCTTGGACCAACAAACGGGGAGAAATCCTTGCCCGGTACACCACTACCGAAAAGCTGTCTATT

CircID	chr16:19564851\|19573241
ORF Type	ORF3
Protein Length	58
Nucleotide Length	174
Protein Sequence	MPTGGCTIGVWGLSPSETHNCHRVKDKESEPERKHFFHVLLLLQLRGGPAEQRPRWD*
Nucleotide Sequence	ATGCCGACTGGAGGCTGTACCATTGGAGTTTGGGGACTATCACCCTCTGAAACCCATAACTGTCACAGAGTCAAAGACAAAGAAAGTGAACCGGAAAGGAAGCACTTCTTCCACGTCCTCCTCCTCCTCCAGCTCCGTGGTGGACCCGCTGAGCAGCGTCCTCGATGGGACTGA

CircID	chr16:19564851\|19573241
ORF Type	ORF4
Protein Length	37
Nucleotide Length	111
Protein Sequence	MGLTPSPCLQPLLTPQPWQLPWTAPEGNVIEMITPL*
Nucleotide Sequence	ATGGGACTGACCCCCTCTCCATGTTTGCAGCCACTGCTGACCCCGCAGCCTTGGCAGCTGCCATGGACAGCTCCAGAAGGAAACGTGATAGAGATGATAACTCCGTTGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:19564851\|19573241	ELAVL1	1	3	0
chr16:19564851\|19573241	NCBP3	0	1	0
chr16:19564851\|19573241	FAM120A	0	1	0
chr16:19564851\|19573241	PRPF8	0	1	0
chr16:19564851\|19573241	FMR1	0	0	3
chr16:19564851\|19573241	FUS	0	3	0
chr16:19564851\|19573241	DGCR8	0	0	2
chr16:19564851\|19573241	SRSF1	0	0	1
chr16:19564851\|19573241	NOP58	0	2	0
chr16:19564851\|19573241	U2AF2	8	3	0
chr16:19564851\|19573241	HNRNPU	0	1	0
chr16:19564851\|19573241	RBM10	0	1	0
chr16:19564851\|19573241	HNRNPA2B1	0	1	0
chr16:19564851\|19573241	FIP1L1	0	1	0
chr16:19564851\|19573241	PTBP1	0	0	1
chr16:19564851\|19573241	HNRNPC	2	16	0
chr16:19564851\|19573241	TRA2A	0	0	1
chr16:19564851\|19573241	ZNF184	0	0	1
chr16:19564851\|19573241	DDX3X	1	0	2
chr16:19564851\|19573241	ZC3H7B	0	0	1
chr16:19564851\|19573241	LIN28B	0	0	2
chr16:19564851\|19573241	FXR1	0	0	3
chr16:19564851\|19573241	FXR2	1	0	2
chr16:19564851\|19573241	IGF2BP1	0	0	2
chr16:19564851\|19573241	IGF2BP2	0	3	7
chr16:19564851\|19573241	TARDBP	1	1	0
chr16:19564851\|19573241	RBFOX2	0	0	1
chr16:19564851\|19573241	EIF4G2	0	0	1
chr16:19564851\|19573241	XRN2	0	1	0
chr16:19564851\|19573241	WDR33	1	0	0
chr16:19564851\|19573241	RTCB	0	1	0
chr16:19564851\|19573241	FBL	0	0	2
chr16:19564851\|19573241	ATXN2	1	0	0
chr16:19564851\|19573241	EIF4A3	0	1	6
chr16:19564851\|19573241	AGO2	0	1	1

CircRNA Information