CircRNA Information

General Information
circRNA Basic Information
CircID chr16:19859561|19859743
Strand -
CircType exon
Host Gene ENSG00000167191.10;
Algorism CIRI2;
Sequence CTGCCGTGGTGCCTGCCTTCCAACCTGCCTCCCGGAGGGGCTTTCAGCTGGAGACCCCATTGGAGCTCTTGAAATGAATAAGGGAATAAAATTGGGAGAGGATTTGGAGATACACCCGTAAGTGTAGGAACAGGGCGAGATGATCAAGGGAAGAAGGGACTGCTGCCCCAAGCCAGAATATTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:19859561|19859743 hsa-miR-204-5p 0 0 1
chr16:19859561|19859743 hsa-miR-204-3p 0 0 1
chr16:19859561|19859743 hsa-miR-211-5p 0 0 1
chr16:19859561|19859743 hsa-miR-211-3p 0 0 1
chr16:19859561|19859743 hsa-miR-149-5p 0 0 1
chr16:19859561|19859743 hsa-miR-149-3p 0 0 1
chr16:19859561|19859743 hsa-miR-150-5p 0 0 1
chr16:19859561|19859743 hsa-miR-150-3p 0 0 1
chr16:19859561|19859743 hsa-miR-335-5p 0 0 1
chr16:19859561|19859743 hsa-miR-335-3p 0 0 1
chr16:19859561|19859743 hsa-miR-498-5p 0 0 1
chr16:19859561|19859743 hsa-miR-498-3p 0 0 1
chr16:19859561|19859743 hsa-miR-579-5p 0 0 1
chr16:19859561|19859743 hsa-miR-579-3p 0 0 1
chr16:19859561|19859743 hsa-miR-623 1 0 1
chr16:19859561|19859743 hsa-miR-650 0 0 1
chr16:19859561|19859743 hsa-miR-657 0 0 1
chr16:19859561|19859743 hsa-miR-766-5p 0 0 1
chr16:19859561|19859743 hsa-miR-766-3p 0 0 1
chr16:19859561|19859743 hsa-miR-940 0 0 1
chr16:19859561|19859743 hsa-miR-1248 0 0 1
chr16:19859561|19859743 hsa-miR-1249-5p 0 0 1
chr16:19859561|19859743 hsa-miR-1249-3p 0 0 1
chr16:19859561|19859743 hsa-miR-1827 0 0 1
chr16:19859561|19859743 hsa-miR-486-3p 0 0 1
chr16:19859561|19859743 hsa-miR-532-3p 0 0 1
chr16:19859561|19859743 hsa-miR-615-5p 0 0 1
chr16:19859561|19859743 hsa-miR-146b-3p 0 0 1
chr16:19859561|19859743 hsa-miR-515-5p 0 0 1
chr16:19859561|19859743 hsa-miR-590-3p 0 0 1
chr16:19859561|19859743 hsa-miR-1274b 0 0 1
chr16:19859561|19859743 hsa-miR-664 0 0 1
chr16:19859561|19859743 hsa-miR-1826 0 0 1
chr16:19859561|19859743 hsa-miR-3196 1 0 0
chr16:19859561|19859743 hsa-miR-4312 1 0 0
chr16:19859561|19859743 hsa-miR-4260 1 0 0
chr16:19859561|19859743 hsa-miR-4274 1 0 0
chr16:19859561|19859743 hsa-miR-3665 1 0 0
chr16:19859561|19859743 hsa-miR-4425 1 0 0
chr16:19859561|19859743 hsa-miR-3689c 1 0 0
chr16:19859561|19859743 hsa-miR-3978 1 0 0
chr16:19859561|19859743 hsa-miR-4688 1 0 0
chr16:19859561|19859743 hsa-miR-4780 1 0 0
chr16:19859561|19859743 hsa-miR-6086 1 0 0
chr16:19859561|19859743 hsa-miR-6125 1 0 0
chr16:19859561|19859743 hsa-miR-8072 1 0 0
chr16:19859561|19859743 hsa-miR-6765-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6720-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6089 1 0 0
chr16:19859561|19859743 hsa-miR-3192-5p 1 0 0
chr16:19859561|19859743 hsa-miR-4695-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6875-3p 1 0 0
chr16:19859561|19859743 hsa-miR-6726-3p 1 0 0
chr16:19859561|19859743 hsa-miR-6832-3p 1 0 0
chr16:19859561|19859743 hsa-miR-3190-3p 1 0 0
chr16:19859561|19859743 hsa-miR-296-3p 1 0 0
chr16:19859561|19859743 hsa-miR-6771-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6818-3p 1 0 0
chr16:19859561|19859743 hsa-miR-6809-3p 1 0 0
chr16:19859561|19859743 hsa-miR-7111-3p 1 0 0
chr16:19859561|19859743 hsa-miR-7112-5p 1 0 0
chr16:19859561|19859743 hsa-miR-4646-3p 1 0 0
chr16:19859561|19859743 hsa-miR-135b-3p 1 0 0
chr16:19859561|19859743 hsa-miR-2114-5p 1 0 0
chr16:19859561|19859743 hsa-miR-1910-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6886-3p 1 0 0
chr16:19859561|19859743 hsa-miR-5088-3p 1 0 0
chr16:19859561|19859743 hsa-miR-6780b-3p 1 0 0
chr16:19859561|19859743 hsa-miR-1207-5p 1 0 0
chr16:19859561|19859743 hsa-miR-1233-5p 1 0 0
chr16:19859561|19859743 hsa-miR-1273h-5p 1 0 0
chr16:19859561|19859743 hsa-miR-3689b-3p 1 0 0
chr16:19859561|19859743 hsa-miR-4763-3p 1 0 0
chr16:19859561|19859743 hsa-miR-6778-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6816-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6893-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6743-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6754-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6779-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6808-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6879-5p 1 0 0
chr16:19859561|19859743 hsa-miR-4685-3p 1 0 0
chr16:19859561|19859743 hsa-miR-4728-5p 1 0 0
chr16:19859561|19859743 hsa-miR-328-5p 1 0 0
chr16:19859561|19859743 hsa-miR-3689a-3p 1 0 0
chr16:19859561|19859743 hsa-miR-4745-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6848-5p 1 0 0
chr16:19859561|19859743 hsa-miR-3940-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6785-5p 1 0 0
chr16:19859561|19859743 hsa-miR-4756-5p 1 0 0
chr16:19859561|19859743 hsa-miR-6827-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:19859561|19859743
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MGQQSLLPLIISPCSYTYGCISKSSPNFIPLFISRAPMGSPAESPSGRQVGRQAPRQ
Nucleotide Sequence TTGGGGCAGCAGTCCCTTCTTCCCTTGATCATCTCGCCCTGTTCCTACACTTACGGGTGTATCTCCAAATCCTCTCCCAATTTTATTCCCTTATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGAAAGCCCCTCCGGGAGGCAGGTTGGAAGGCAGGCACCACGGCAG
CircID chr16:19859561|19859743
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MFLHLRVYLQILSQFYSLIHFKSSNGVSS
Nucleotide Sequence CTGTTCCTACACTTACGGGTGTATCTCCAAATCCTCTCCCAATTTTATTCCCTTATTCATTTCAAGAGCTCCAATGGGGTCTCCAGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab