CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2036402|2036751
Strand -
CircType exon
Host Gene ENSG00000065054.12;
Algorism CIRI2;
Sequence CTGCATAGTGACAAGTCCCGGCCCGGCCAGTACATCCGCTCTGTGGACCCGGGCTCACCTGCCGCCCGCTCTGGCCTCCGCGCCCAGGACCGGCTCATTGAGGTACCGGCCCACCAGGGCTGCGGGGTGCCGAGTGCCCCGCACCTGTCCACACTGGGGCCCTGGGTCCTTGCAGGGAGGAGGGAGACGCTGGGAACCTGAGCTGGTGCGCCTCCTGCTGCCTCGGTGGGCGGTGGCTGTGATGAATATTTGATGCCACACCTGGCCACGCGGCGTTGGGGGCTGTCTGGGCCCATGGCGGGGCTGATACATGCTGGTGGCGGCAGGTGAACGGGCAGAATGTGGAGGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2036402|2036751 hsa-miR-214-5p 0 0 1
chr16:2036402|2036751 hsa-miR-214-3p 0 0 1
chr16:2036402|2036751 hsa-miR-193b-5p 0 0 1
chr16:2036402|2036751 hsa-miR-193b-3p 0 0 1
chr16:2036402|2036751 hsa-miR-552-5p 0 0 1
chr16:2036402|2036751 hsa-miR-552-3p 0 0 1
chr16:2036402|2036751 hsa-miR-634 0 0 1
chr16:2036402|2036751 hsa-miR-658 0 0 1
chr16:2036402|2036751 hsa-miR-668-5p 0 0 1
chr16:2036402|2036751 hsa-miR-668-3p 0 0 1
chr16:2036402|2036751 hsa-miR-675-5p 0 0 1
chr16:2036402|2036751 hsa-miR-675-3p 0 0 1
chr16:2036402|2036751 hsa-miR-892b 0 0 1
chr16:2036402|2036751 hsa-miR-541-5p 0 0 1
chr16:2036402|2036751 hsa-miR-541-3p 0 0 1
chr16:2036402|2036751 hsa-miR-744-5p 0 0 1
chr16:2036402|2036751 hsa-miR-744-3p 0 0 1
chr16:2036402|2036751 hsa-miR-1226-5p 0 0 1
chr16:2036402|2036751 hsa-miR-1226-3p 0 0 1
chr16:2036402|2036751 hsa-miR-1204 0 1 1
chr16:2036402|2036751 hsa-miR-1324 0 1 1
chr16:2036402|2036751 hsa-miR-1827 0 1 1
chr16:2036402|2036751 hsa-miR-125a-3p 0 1 1
chr16:2036402|2036751 hsa-miR-1225-3p 0 0 1
chr16:2036402|2036751 hsa-miR-296-5p 0 0 1
chr16:2036402|2036751 hsa-miR-199a-5p 0 0 1
chr16:2036402|2036751 hsa-miR-654-5p 0 1 1
chr16:2036402|2036751 hsa-miR-199b-5p 0 0 1
chr16:2036402|2036751 hsa-miR-338-3p 0 0 1
chr16:2036402|2036751 hsa-miR-324-3p 0 0 1
chr16:2036402|2036751 hsa-miR-193a-3p 0 0 1
chr16:2036402|2036751 hsa-miR-1280 0 0 1
chr16:2036402|2036751 hsa-miR-1233 0 0 1
chr16:2036402|2036751 hsa-miR-644 0 0 1
chr16:2036402|2036751 hsa-miR-664 0 0 1
chr16:2036402|2036751 hsa-miR-346 1 1 0
chr16:2036402|2036751 hsa-miR-484 1 0 0
chr16:2036402|2036751 hsa-miR-650 1 0 0
chr16:2036402|2036751 hsa-miR-661 1 0 0
chr16:2036402|2036751 hsa-miR-657 0 1 0
chr16:2036402|2036751 hsa-miR-762 1 0 0
chr16:2036402|2036751 hsa-miR-764 0 1 0
chr16:2036402|2036751 hsa-miR-663b 1 0 0
chr16:2036402|2036751 hsa-miR-1268a 1 0 0
chr16:2036402|2036751 hsa-miR-1469 1 0 0
chr16:2036402|2036751 hsa-miR-1470 1 0 0
chr16:2036402|2036751 hsa-miR-1913 1 0 0
chr16:2036402|2036751 hsa-miR-711 0 1 0
chr16:2036402|2036751 hsa-miR-2861 1 0 0
chr16:2036402|2036751 hsa-miR-3138 0 1 0
chr16:2036402|2036751 hsa-miR-3196 1 0 0
chr16:2036402|2036751 hsa-miR-3197 1 1 0
chr16:2036402|2036751 hsa-miR-3665 0 1 0
chr16:2036402|2036751 hsa-miR-3918 0 1 0
chr16:2036402|2036751 hsa-miR-3943 0 1 0
chr16:2036402|2036751 hsa-miR-1268b 1 0 0
chr16:2036402|2036751 hsa-miR-4449 1 0 0
chr16:2036402|2036751 hsa-miR-4466 1 1 0
chr16:2036402|2036751 hsa-miR-4469 0 1 0
chr16:2036402|2036751 hsa-miR-4486 0 1 0
chr16:2036402|2036751 hsa-miR-4505 1 1 0
chr16:2036402|2036751 hsa-miR-1587 1 0 0
chr16:2036402|2036751 hsa-miR-3960 1 0 0
chr16:2036402|2036751 hsa-miR-3972 1 0 0
chr16:2036402|2036751 hsa-miR-4634 1 0 0
chr16:2036402|2036751 hsa-miR-4642 1 0 0
chr16:2036402|2036751 hsa-miR-4660 0 1 0
chr16:2036402|2036751 hsa-miR-4674 1 0 0
chr16:2036402|2036751 hsa-miR-4706 1 0 0
chr16:2036402|2036751 hsa-miR-4736 0 1 0
chr16:2036402|2036751 hsa-miR-6069 1 0 0
chr16:2036402|2036751 hsa-miR-6084 1 0 0
chr16:2036402|2036751 hsa-miR-6165 0 1 0
chr16:2036402|2036751 hsa-miR-6860 1 0 0
chr16:2036402|2036751 hsa-miR-12121 1 0 0
chr16:2036402|2036751 hsa-miR-12129 0 1 0
chr16:2036402|2036751 hsa-miR-6749-3p 0 1 0
chr16:2036402|2036751 hsa-miR-92a-2-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6840-3p 1 0 0
chr16:2036402|2036751 hsa-miR-4665-3p 1 0 0
chr16:2036402|2036751 hsa-miR-6765-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6854-5p 0 1 0
chr16:2036402|2036751 hsa-miR-6728-5p 1 0 0
chr16:2036402|2036751 hsa-miR-3934-5p 1 1 0
chr16:2036402|2036751 hsa-miR-6089 1 1 0
chr16:2036402|2036751 hsa-miR-4695-5p 0 1 0
chr16:2036402|2036751 hsa-miR-4722-5p 1 1 0
chr16:2036402|2036751 hsa-miR-593-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6820-5p 1 1 0
chr16:2036402|2036751 hsa-miR-6721-5p 1 0 0
chr16:2036402|2036751 hsa-miR-3189-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6845-3p 1 1 0
chr16:2036402|2036751 hsa-miR-6732-5p 1 0 0
chr16:2036402|2036751 hsa-miR-3934-3p 0 1 0
chr16:2036402|2036751 hsa-miR-2277-3p 1 0 0
chr16:2036402|2036751 hsa-miR-1908-3p 1 0 0
chr16:2036402|2036751 hsa-miR-4640-5p 1 0 0
chr16:2036402|2036751 hsa-miR-4691-3p 0 1 0
chr16:2036402|2036751 hsa-miR-1228-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6771-5p 1 0 0
chr16:2036402|2036751 hsa-miR-92b-5p 1 0 0
chr16:2036402|2036751 hsa-miR-3677-3p 1 0 0
chr16:2036402|2036751 hsa-miR-4783-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6749-5p 1 0 0
chr16:2036402|2036751 hsa-miR-4743-5p 1 0 0
chr16:2036402|2036751 hsa-miR-2276-3p 0 1 0
chr16:2036402|2036751 hsa-miR-6781-5p 1 1 0
chr16:2036402|2036751 hsa-miR-7160-3p 0 1 0
chr16:2036402|2036751 hsa-miR-7152-3p 1 0 0
chr16:2036402|2036751 hsa-miR-6867-3p 0 1 0
chr16:2036402|2036751 hsa-miR-7112-3p 0 1 0
chr16:2036402|2036751 hsa-miR-3940-3p 0 1 0
chr16:2036402|2036751 hsa-miR-6895-3p 1 0 0
chr16:2036402|2036751 hsa-miR-5088-3p 1 0 0
chr16:2036402|2036751 hsa-miR-6738-3p 0 1 0
chr16:2036402|2036751 hsa-miR-4749-3p 1 0 0
chr16:2036402|2036751 hsa-miR-6722-5p 0 1 0
chr16:2036402|2036751 hsa-miR-1207-5p 1 0 0
chr16:2036402|2036751 hsa-miR-4763-3p 1 0 0
chr16:2036402|2036751 hsa-miR-6787-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6816-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6775-5p 0 1 0
chr16:2036402|2036751 hsa-miR-5001-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6756-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6803-5p 1 0 0
chr16:2036402|2036751 hsa-miR-10401-5p 0 1 0
chr16:2036402|2036751 hsa-miR-6754-3p 0 1 0
chr16:2036402|2036751 hsa-miR-3620-5p 1 0 0
chr16:2036402|2036751 hsa-miR-5189-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6836-5p 1 0 0
chr16:2036402|2036751 hsa-miR-10396a-5p 0 1 0
chr16:2036402|2036751 hsa-miR-1237-5p 1 0 0
chr16:2036402|2036751 hsa-miR-328-5p 1 0 0
chr16:2036402|2036751 hsa-miR-4649-5p 1 0 0
chr16:2036402|2036751 hsa-miR-4685-5p 1 1 0
chr16:2036402|2036751 hsa-miR-4726-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6729-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6848-5p 1 0 0
chr16:2036402|2036751 hsa-miR-4758-5p 1 0 0
chr16:2036402|2036751 hsa-miR-365b-5p 0 1 0
chr16:2036402|2036751 hsa-miR-10396a-3p 1 0 0
chr16:2036402|2036751 hsa-miR-10396b-3p 1 0 0
chr16:2036402|2036751 hsa-miR-6799-3p 1 0 0
chr16:2036402|2036751 hsa-miR-1199-5p 1 0 0
chr16:2036402|2036751 hsa-miR-6773-5p 0 1 0
chr16:2036402|2036751 hsa-miR-6724-5p 1 1 0
chr16:2036402|2036751 hsa-miR-6756-3p 1 0 0
chr16:2036402|2036751 hsa-miR-10401-3p 1 0 0
chr16:2036402|2036751 hsa-miR-6837-5p 0 1 0
chr16:2036402|2036751 hsa-miR-9851-3p 1 0 0
chr16:2036402|2036751 hsa-miR-10392-3p 1 1 0
chr16:2036402|2036751 hsa-miR-3619-5p 0 1 0
chr16:2036402|2036751 hsa-miR-6764-5p 0 1 0
chr16:2036402|2036751 hsa-miR-1271-5p 0 1 0
chr16:2036402|2036751 hsa-miR-412-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:2036402|2036751
ORF Type ORF1
Protein Length 66
Nucleotide Length 201
Protein Sequence LHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVPAHQGCGVPSAPHLSTLGPWVLAGRRETLGT
Nucleotide Sequence CTGCATAGTGACAAGTCCCGGCCCGGCCAGTACATCCGCTCTGTGGACCCGGGCTCACCTGCCGCCCGCTCTGGCCTCCGCGCCCAGGACCGGCTCATTGAGGTACCGGCCCACCAGGGCTGCGGGGTGCCGAGTGCCCCGCACCTGTCCACACTGGGGCCCTGGGTCCTTGCAGGGAGGAGGGAGACGCTGGGAACCTGA
CircID chr16:2036402|2036751
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MMPHLATRRWGLSGPMAGLIHAGGGR
Nucleotide Sequence TTGATGCCACACCTGGCCACGCGGCGTTGGGGGCTGTCTGGGCCCATGGCGGGGCTGATACATGCTGGTGGCGGCAGGTGA
CircID chr16:2036402|2036751
ORF Type ORF3
Protein Length 70
Nucleotide Length 213
Protein Sequence MWTRAHLPPALASAPRTGSLRYRPTRAAGCRVPRTCPHWGPGSLQGGGRRWEPELVRLLLPRWAVAVMNI
Nucleotide Sequence CTGTGGACCCGGGCTCACCTGCCGCCCGCTCTGGCCTCCGCGCCCAGGACCGGCTCATTGAGGTACCGGCCCACCAGGGCTGCGGGGTGCCGAGTGCCCCGCACCTGTCCACACTGGGGCCCTGGGTCCTTGCAGGGAGGAGGGAGACGCTGGGAACCTGAGCTGGTGCGCCTCCTGCTGCCTCGGTGGGCGGTGGCTGTGATGAATATTTGA
CircID chr16:2036402|2036751
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MRGAECPAPVHTGALGPCREEGDAGNLSWCASCCLGGRWL
Nucleotide Sequence CTGCGGGGTGCCGAGTGCCCCGCACCTGTCCACACTGGGGCCCTGGGTCCTTGCAGGGAGGAGGGAGACGCTGGGAACCTGAGCTGGTGCGCCTCCTGCTGCCTCGGTGGGCGGTGGCTGTGA
CircID chr16:2036402|2036751
ORF Type ORF5
Protein Length 25
Nucleotide Length 75
Protein Sequence MGAVWAHGGADTCWWRQVNGQNVEG
Nucleotide Sequence TTGGGGGCTGTCTGGGCCCATGGCGGGGCTGATACATGCTGGTGGCGGCAGGTGAACGGGCAGAATGTGGAGGGA
CircID chr16:2036402|2036751
ORF Type ORF6
Protein Length 112
Nucleotide Length 336
Protein Sequence MPVHLPPPACISPAMGPDSPQRRVARCGIKYSSQPPPTEAAGGAPAQVPSVSLLPARTQGPSVDRCGALGTPQPWWAGTSMSRSWARRPERAAGEPGSTERMYWPGRDLSLC
Nucleotide Sequence CTGCCCGTTCACCTGCCGCCACCAGCATGTATCAGCCCCGCCATGGGCCCAGACAGCCCCCAACGCCGCGTGGCCAGGTGTGGCATCAAATATTCATCACAGCCACCGCCCACCGAGGCAGCAGGAGGCGCACCAGCTCAGGTTCCCAGCGTCTCCCTCCTCCCTGCAAGGACCCAGGGCCCCAGTGTGGACAGGTGCGGGGCACTCGGCACCCCGCAGCCCTGGTGGGCCGGTACCTCAATGAGCCGGTCCTGGGCGCGGAGGCCAGAGCGGGCGGCAGGTGAGCCCGGGTCCACAGAGCGGATGTACTGGCCGGGCCGGGACTTGTCACTATGC
CircID chr16:2036402|2036751
ORF Type ORF7
Protein Length 26
Nucleotide Length 81
Protein Sequence MQGPRAPVWTGAGHSAPRSPGGPVPQ
Nucleotide Sequence CTGCAAGGACCCAGGGCCCCAGTGTGGACAGGTGCGGGGCACTCGGCACCCCGCAGCCCTGGTGGGCCGGTACCTCAATGA
CircID chr16:2036402|2036751
ORF Type ORF8
Protein Length 85
Nucleotide Length 258
Protein Sequence MYQPRHGPRQPPTPRGQVWHQIFITATAHRGSRRRTSSGSQRLPPPCKDPGPQCGQVRGTRHPAALVGRYLNEPVLGAEARAGGR
Nucleotide Sequence ATGTATCAGCCCCGCCATGGGCCCAGACAGCCCCCAACGCCGCGTGGCCAGGTGTGGCATCAAATATTCATCACAGCCACCGCCCACCGAGGCAGCAGGAGGCGCACCAGCTCAGGTTCCCAGCGTCTCCCTCCTCCCTGCAAGGACCCAGGGCCCCAGTGTGGACAGGTGCGGGGCACTCGGCACCCCGCAGCCCTGGTGGGCCGGTACCTCAATGAGCCGGTCCTGGGCGCGGAGGCCAGAGCGGGCGGCAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab