CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2036749|2036998
Strand +
CircType exon
Host Gene ENSG00000065054.12;
Algorism CIRI2;
Sequence CTGGGCAGGGCTGGTTCCATTGGTGACGGGTGACGGCAGAGGACCTGTGGGGACAGCGTGTCAGTGGCTGCTCAGCCACCACACCGCACCCACCCTGTGCCCTGGGCCGTGGCCCACCTTCCACGTGCTCCTCGGTGGGTGTGACCCGAAGCCGCTTGAAGTGTTCATCTGTCTCGGGGTCCACGACCAGCAGCCGGGCCTCGTCCTCCCGTGCCTTGATGCTGGCCACCACCTCAGCATGGCGCAGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2036749|2036998 hsa-miR-498-5p 0 0 1
chr16:2036749|2036998 hsa-miR-498-3p 0 0 1
chr16:2036749|2036998 hsa-miR-506-5p 0 0 1
chr16:2036749|2036998 hsa-miR-506-3p 0 0 1
chr16:2036749|2036998 hsa-miR-564 0 0 1
chr16:2036749|2036998 hsa-miR-675-5p 0 0 1
chr16:2036749|2036998 hsa-miR-675-3p 0 0 1
chr16:2036749|2036998 hsa-miR-541-5p 0 0 1
chr16:2036749|2036998 hsa-miR-541-3p 0 0 1
chr16:2036749|2036998 hsa-miR-1228-5p 0 0 1
chr16:2036749|2036998 hsa-miR-1228-3p 0 0 1
chr16:2036749|2036998 hsa-miR-1288-5p 0 0 1
chr16:2036749|2036998 hsa-miR-1288-3p 0 0 1
chr16:2036749|2036998 hsa-miR-654-5p 0 1 1
chr16:2036749|2036998 hsa-miR-338-3p 0 1 1
chr16:2036749|2036998 hsa-miR-151-5p 0 0 1
chr16:2036749|2036998 hsa-miR-1280 0 0 1
chr16:2036749|2036998 hsa-miR-220c 0 0 1
chr16:2036749|2036998 hsa-miR-138 0 0 1
chr16:2036749|2036998 hsa-miR-124 0 0 1
chr16:2036749|2036998 hsa-miR-220a 0 0 1
chr16:2036749|2036998 hsa-miR-663b 1 0 0
chr16:2036749|2036998 hsa-miR-1269a 0 1 0
chr16:2036749|2036998 hsa-miR-1538 0 1 0
chr16:2036749|2036998 hsa-miR-4440 0 1 0
chr16:2036749|2036998 hsa-miR-4462 1 0 0
chr16:2036749|2036998 hsa-miR-1269b 0 1 0
chr16:2036749|2036998 hsa-miR-4651 0 1 0
chr16:2036749|2036998 hsa-miR-4657 0 1 0
chr16:2036749|2036998 hsa-miR-4663 0 1 0
chr16:2036749|2036998 hsa-miR-4689 1 0 0
chr16:2036749|2036998 hsa-miR-4739 1 0 0
chr16:2036749|2036998 hsa-miR-5787 1 0 0
chr16:2036749|2036998 hsa-miR-6075 0 1 0
chr16:2036749|2036998 hsa-miR-6081 1 0 0
chr16:2036749|2036998 hsa-miR-9718 1 0 0
chr16:2036749|2036998 hsa-miR-370-3p 0 1 0
chr16:2036749|2036998 hsa-miR-668-3p 1 0 0
chr16:2036749|2036998 hsa-miR-6879-3p 1 0 0
chr16:2036749|2036998 hsa-miR-6765-5p 1 0 0
chr16:2036749|2036998 hsa-miR-7106-5p 0 1 0
chr16:2036749|2036998 hsa-miR-6894-5p 1 0 0
chr16:2036749|2036998 hsa-miR-3692-5p 0 1 0
chr16:2036749|2036998 hsa-miR-766-5p 1 0 0
chr16:2036749|2036998 hsa-miR-3622a-5p 1 1 0
chr16:2036749|2036998 hsa-miR-6089 1 0 0
chr16:2036749|2036998 hsa-miR-7154-3p 0 1 0
chr16:2036749|2036998 hsa-miR-7160-5p 0 1 0
chr16:2036749|2036998 hsa-miR-6741-5p 0 1 0
chr16:2036749|2036998 hsa-miR-6762-3p 0 1 0
chr16:2036749|2036998 hsa-miR-3622b-5p 1 1 0
chr16:2036749|2036998 hsa-miR-181a-2-3p 0 1 0
chr16:2036749|2036998 hsa-miR-3190-3p 0 1 0
chr16:2036749|2036998 hsa-miR-6765-3p 1 0 0
chr16:2036749|2036998 hsa-miR-6858-3p 0 1 0
chr16:2036749|2036998 hsa-miR-1226-5p 1 0 0
chr16:2036749|2036998 hsa-miR-4640-5p 1 0 0
chr16:2036749|2036998 hsa-miR-4691-3p 0 1 0
chr16:2036749|2036998 hsa-miR-6771-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6780a-3p 0 1 0
chr16:2036749|2036998 hsa-miR-4787-5p 1 0 0
chr16:2036749|2036998 hsa-miR-149-3p 1 0 0
chr16:2036749|2036998 hsa-miR-4800-5p 0 1 0
chr16:2036749|2036998 hsa-miR-6825-3p 0 1 0
chr16:2036749|2036998 hsa-miR-7162-3p 0 1 0
chr16:2036749|2036998 hsa-miR-6730-3p 0 1 0
chr16:2036749|2036998 hsa-miR-124-3p 0 1 0
chr16:2036749|2036998 hsa-miR-1233-5p 1 1 0
chr16:2036749|2036998 hsa-miR-4763-3p 1 0 0
chr16:2036749|2036998 hsa-miR-6769b-5p 0 1 0
chr16:2036749|2036998 hsa-miR-6787-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6816-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6775-5p 1 1 0
chr16:2036749|2036998 hsa-miR-1343-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6743-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6756-5p 1 1 0
chr16:2036749|2036998 hsa-miR-6769a-5p 0 1 0
chr16:2036749|2036998 hsa-miR-11181-3p 1 0 0
chr16:2036749|2036998 hsa-miR-1915-3p 0 1 0
chr16:2036749|2036998 hsa-miR-4632-5p 1 0 0
chr16:2036749|2036998 hsa-miR-4685-5p 1 1 0
chr16:2036749|2036998 hsa-miR-6795-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6858-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6883-5p 0 1 0
chr16:2036749|2036998 hsa-miR-3085-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6724-5p 1 0 0
chr16:2036749|2036998 hsa-miR-6837-5p 0 1 0
chr16:2036749|2036998 hsa-miR-99b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:2036749|2036998
ORF Type ORF1
Protein Length 80
Nucleotide Length 240
Protein Sequence MVPLVTGDGRGPVGTACQWLLSHHTAPTLCPGPWPTFHVLLGGCDPKPLEVFICLGVHDQQPGLVLPCLDAGHHLSMAQS
Nucleotide Sequence CTGGTTCCATTGGTGACGGGTGACGGCAGAGGACCTGTGGGGACAGCGTGTCAGTGGCTGCTCAGCCACCACACCGCACCCACCCTGTGCCCTGGGCCGTGGCCCACCTTCCACGTGCTCCTCGGTGGGTGTGACCCGAAGCCGCTTGAAGTGTTCATCTGTCTCGGGGTCCACGACCAGCAGCCGGGCCTCGTCCTCCCGTGCCTTGATGCTGGCCACCACCTCAGCATGGCGCAGTCC
CircID chr16:2036749|2036998
ORF Type ORF2
Protein Length 68
Nucleotide Length 204
Protein Sequence MWGQRVSGCSATTPHPPCALGRGPPSTCSSVGVTRSRLKCSSVSGSTTSSRASSSRALMLATTSAWRS
Nucleotide Sequence CTGTGGGGACAGCGTGTCAGTGGCTGCTCAGCCACCACACCGCACCCACCCTGTGCCCTGGGCCGTGGCCCACCTTCCACGTGCTCCTCGGTGGGTGTGACCCGAAGCCGCTTGAAGTGTTCATCTGTCTCGGGGTCCACGACCAGCAGCCGGGCCTCGTCCTCCCGTGCCTTGATGCTGGCCACCACCTCAGCATGGCGCAGT
CircID chr16:2036749|2036998
ORF Type ORF3
Protein Length 82
Nucleotide Length 246
Protein Sequence MRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGGPRPRAQGGCGVVAEQPLTRCPHRSSAVTRHQWNQPCP
Nucleotide Sequence CTGCGCCATGCTGAGGTGGTGGCCAGCATCAAGGCACGGGAGGACGAGGCCCGGCTGCTGGTCGTGGACCCCGAGACAGATGAACACTTCAAGCGGCTTCGGGTCACACCCACCGAGGAGCACGTGGAAGGTGGGCCACGGCCCAGGGCACAGGGTGGGTGCGGTGTGGTGGCTGAGCAGCCACTGACACGCTGTCCCCACAGGTCCTCTGCCGTCACCCGTCACCAATGGAACCAGCCCTGCCCA
CircID chr16:2036749|2036998
ORF Type ORF4
Protein Length 59
Nucleotide Length 180
Protein Sequence MLRWWPASRHGRTRPGCWSWTPRQMNTSSGFGSHPPRSTWKVGHGPGHRVGAVWWLSSH
Nucleotide Sequence ATGCTGAGGTGGTGGCCAGCATCAAGGCACGGGAGGACGAGGCCCGGCTGCTGGTCGTGGACCCCGAGACAGATGAACACTTCAAGCGGCTTCGGGTCACACCCACCGAGGAGCACGTGGAAGGTGGGCCACGGCCCAGGGCACAGGGTGGGTGCGGTGTGGTGGCTGAGCAGCCACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab