CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2175111|2175384
Strand +
CircType exon
Host Gene ENSG00000131653.11;
Algorism CIRI2;
Sequence GTTGTGTGAGGAGACCAGCGTGCACACCGGGTTGTCATGGGCCCGGATGGTGTTCACCTTCTGCAGGTTCTGGATGTCCCACACAATGATGGTGCAGTCTGCAGAGCCGCTGTAGAGTTTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2175111|2175384 hsa-miR-19a-5p 0 0 1
chr16:2175111|2175384 hsa-miR-19a-3p 0 0 1
chr16:2175111|2175384 hsa-miR-377-5p 0 0 1
chr16:2175111|2175384 hsa-miR-377-3p 0 0 1
chr16:2175111|2175384 hsa-miR-612 1 0 1
chr16:2175111|2175384 hsa-miR-618 0 1 1
chr16:2175111|2175384 hsa-miR-622 0 0 1
chr16:2175111|2175384 hsa-miR-298 0 0 1
chr16:2175111|2175384 hsa-miR-874-5p 0 0 1
chr16:2175111|2175384 hsa-miR-874-3p 0 0 1
chr16:2175111|2175384 hsa-miR-541-5p 0 0 1
chr16:2175111|2175384 hsa-miR-541-3p 0 0 1
chr16:2175111|2175384 hsa-miR-760 0 1 1
chr16:2175111|2175384 hsa-miR-1205 0 0 1
chr16:2175111|2175384 hsa-miR-513b-5p 0 0 1
chr16:2175111|2175384 hsa-miR-513b-3p 0 0 1
chr16:2175111|2175384 hsa-miR-139-5p 0 0 1
chr16:2175111|2175384 hsa-miR-125a-3p 0 0 1
chr16:2175111|2175384 hsa-miR-767-5p 0 1 1
chr16:2175111|2175384 hsa-miR-485-5p 0 0 1
chr16:2175111|2175384 hsa-miR-146b-3p 0 0 1
chr16:2175111|2175384 hsa-miR-1184 0 0 1
chr16:2175111|2175384 hsa-miR-654-5p 0 0 1
chr16:2175111|2175384 hsa-miR-508-5p 0 1 1
chr16:2175111|2175384 hsa-miR-1207-5p 0 0 1
chr16:2175111|2175384 hsa-miR-125a-5p 0 0 1
chr16:2175111|2175384 hsa-miR-1302 0 0 1
chr16:2175111|2175384 hsa-miR-342-3p 0 0 1
chr16:2175111|2175384 hsa-miR-125b 0 0 1
chr16:2175111|2175384 hsa-miR-644 0 0 1
chr16:2175111|2175384 hsa-miR-1285 0 0 1
chr16:2175111|2175384 hsa-miR-19b 0 0 1
chr16:2175111|2175384 hsa-miR-886-3p 0 0 1
chr16:2175111|2175384 hsa-miR-147 0 0 1
chr16:2175111|2175384 hsa-miR-549 0 0 1
chr16:2175111|2175384 hsa-miR-663a 1 0 0
chr16:2175111|2175384 hsa-miR-2861 1 0 0
chr16:2175111|2175384 hsa-miR-544b 0 1 0
chr16:2175111|2175384 hsa-miR-3141 1 0 0
chr16:2175111|2175384 hsa-miR-4289 0 1 0
chr16:2175111|2175384 hsa-miR-3907 1 1 0
chr16:2175111|2175384 hsa-miR-3937 0 1 0
chr16:2175111|2175384 hsa-miR-378g 0 1 0
chr16:2175111|2175384 hsa-miR-4674 0 1 0
chr16:2175111|2175384 hsa-miR-5693 0 1 0
chr16:2175111|2175384 hsa-miR-6075 0 1 0
chr16:2175111|2175384 hsa-miR-6132 0 1 0
chr16:2175111|2175384 hsa-miR-6860 1 0 0
chr16:2175111|2175384 hsa-miR-7703 0 1 0
chr16:2175111|2175384 hsa-miR-7976 0 1 0
chr16:2175111|2175384 hsa-miR-12115 1 0 0
chr16:2175111|2175384 hsa-miR-134-3p 0 1 0
chr16:2175111|2175384 hsa-miR-3194-3p 0 1 0
chr16:2175111|2175384 hsa-miR-1273h-3p 0 1 0
chr16:2175111|2175384 hsa-miR-6861-5p 1 0 0
chr16:2175111|2175384 hsa-miR-3934-5p 0 1 0
chr16:2175111|2175384 hsa-miR-1227-5p 0 1 0
chr16:2175111|2175384 hsa-miR-4695-5p 0 1 0
chr16:2175111|2175384 hsa-miR-4722-5p 0 1 0
chr16:2175111|2175384 hsa-miR-6875-3p 0 1 0
chr16:2175111|2175384 hsa-miR-6759-5p 1 0 0
chr16:2175111|2175384 hsa-miR-7108-5p 0 1 0
chr16:2175111|2175384 hsa-miR-6748-5p 0 1 0
chr16:2175111|2175384 hsa-miR-6882-3p 1 0 0
chr16:2175111|2175384 hsa-miR-6786-5p 1 0 0
chr16:2175111|2175384 hsa-miR-4707-3p 0 1 0
chr16:2175111|2175384 hsa-miR-4783-3p 0 1 0
chr16:2175111|2175384 hsa-miR-6802-5p 0 1 0
chr16:2175111|2175384 hsa-miR-3158-5p 0 1 0
chr16:2175111|2175384 hsa-miR-3158-3p 0 1 0
chr16:2175111|2175384 hsa-miR-6741-3p 0 1 0
chr16:2175111|2175384 hsa-miR-4746-5p 1 0 0
chr16:2175111|2175384 hsa-miR-4649-3p 0 1 0
chr16:2175111|2175384 hsa-miR-1296-3p 0 1 0
chr16:2175111|2175384 hsa-miR-1298-3p 0 1 0
chr16:2175111|2175384 hsa-miR-4763-3p 1 1 0
chr16:2175111|2175384 hsa-miR-6769b-5p 1 1 0
chr16:2175111|2175384 hsa-miR-6778-5p 1 0 0
chr16:2175111|2175384 hsa-miR-6865-5p 0 1 0
chr16:2175111|2175384 hsa-miR-6756-5p 1 1 0
chr16:2175111|2175384 hsa-miR-6769a-5p 1 0 0
chr16:2175111|2175384 hsa-miR-6803-5p 1 0 0
chr16:2175111|2175384 hsa-miR-6851-5p 0 1 0
chr16:2175111|2175384 hsa-miR-3620-5p 1 0 0
chr16:2175111|2175384 hsa-miR-6836-5p 0 1 0
chr16:2175111|2175384 hsa-miR-10396b-5p 0 1 0
chr16:2175111|2175384 hsa-miR-328-5p 1 1 0
chr16:2175111|2175384 hsa-miR-4685-5p 1 1 0
chr16:2175111|2175384 hsa-miR-4745-5p 1 1 0
chr16:2175111|2175384 hsa-miR-1238-5p 0 1 0
chr16:2175111|2175384 hsa-miR-4758-5p 1 1 0
chr16:2175111|2175384 hsa-miR-7151-3p 0 1 0
chr16:2175111|2175384 hsa-miR-10400-3p 1 1 0
chr16:2175111|2175384 hsa-miR-10394-5p 1 1 0
chr16:2175111|2175384 hsa-miR-6848-3p 0 1 0
chr16:2175111|2175384 hsa-miR-6843-3p 0 1 0
chr16:2175111|2175384 hsa-miR-519a-2-5p 0 1 0
chr16:2175111|2175384 hsa-miR-520b-5p 0 1 0
chr16:2175111|2175384 hsa-miR-21-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:2175111|2175384
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MGPDGVHLLQVLDVPHNDGAVCRAAVEFA
Nucleotide Sequence ATGGGCCCGGATGGTGTTCACCTTCTGCAGGTTCTGGATGTCCCACACAATGATGGTGCAGTCTGCAGAGCCGCTGTAGAGTTTGCA
CircID chr16:2175111|2175384
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence LCEETSVHTGLSWARMVFTFCRFWMSHTMMVQSAEPL
Nucleotide Sequence TTGTGTGAGGAGACCAGCGTGCACACCGGGTTGTCATGGGCCCGGATGGTGTTCACCTTCTGCAGGTTCTGGATGTCCCACACAATGATGGTGCAGTCTGCAGAGCCGCTGTAG
CircID chr16:2175111|2175384
ORF Type ORF1
Protein Length 79
Nucleotide Length 237
Protein Sequence MGPDGVHLLQVLDVPHLIGEGPAASGHQALPPGVWSPDGEKHVPGAPTDWGGPGPPPAHPPVGPTHNDGAVCRAAVEFA
Nucleotide Sequence ATGGGCCCGGATGGTGTTCACCTTCTGCAGGTTCTGGATGTCCCACACCTGATTGGGGAAGGACCGGCAGCCTCAGGGCACCAAGCCCTGCCACCTGGAGTCTGGAGCCCAGACGGGGAGAAACACGTCCCTGGGGCACCTACAGACTGGGGCGGGCCTGGGCCGCCTCCTGCCCACCCGCCTGTAGGCCCCACTCACAATGATGGTGCAGTCTGCAGAGCCGCTGTAGAGTTTGCA
CircID chr16:2175111|2175384
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence LCEETSVHTGLSWARMVFTFCRFWMSHT
Nucleotide Sequence TTGTGTGAGGAGACCAGCGTGCACACCGGGTTGTCATGGGCCCGGATGGTGTTCACCTTCTGCAGGTTCTGGATGTCCCACACCTGA
CircID chr16:2175111|2175384
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MGKDRQPQGTKPCHLESGAQTGRNTSLGHLQTGAGLGRLLPTRL
Nucleotide Sequence TTGGGGAAGGACCGGCAGCCTCAGGGCACCAAGCCCTGCCACCTGGAGTCTGGAGCCCAGACGGGGAGAAACACGTCCCTGGGGCACCTACAGACTGGGGCGGGCCTGGGCCGCCTCCTGCCCACCCGCCTGTAG
CircID chr16:2175111|2175384
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MEPRRGETRPWGTYRLGRAWAASCPPACRPHSQ
Nucleotide Sequence CTGGAGCCCAGACGGGGAGAAACACGTCCCTGGGGCACCTACAGACTGGGGCGGGCCTGGGCCGCCTCCTGCCCACCCGCCTGTAGGCCCCACTCACAATGA
CircID chr16:2175111|2175384
ORF Type ORF5
Protein Length 37
Nucleotide Length 114
Protein Sequence MGSRLQVAGLGALRLPVLPQSGVGHPEPAEGEHHPGP
Nucleotide Sequence CTGGGCTCCAGACTCCAGGTGGCAGGGCTTGGTGCCCTGAGGCTGCCGGTCCTTCCCCAATCAGGTGTGGGACATCCAGAACCTGCAGAAGGTGAACACCATCCGGGCCCATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab