CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2232046|2232190
Strand +
CircType exon
Host Gene ENSG00000167967.14;
Algorism CIRI2;
Sequence CTCTTTGATGTGCCCACCACCTAGGAGAAGCATCTGGGCCTAAGCCCCAGGACCTGCCCCTGTCCAGAGACCCCAGAGACTGCTGGCTCCAGGGGAGGGGACCTGCTGCTCTGAGCCACACCCTGGACCCAACCTGCACTGAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2232046|2232190 hsa-miR-15a-5p 0 0 1
chr16:2232046|2232190 hsa-miR-15a-3p 0 0 1
chr16:2232046|2232190 hsa-miR-148a-5p 0 0 1
chr16:2232046|2232190 hsa-miR-148a-3p 0 0 1
chr16:2232046|2232190 hsa-miR-214-5p 0 0 1
chr16:2232046|2232190 hsa-miR-214-3p 0 0 1
chr16:2232046|2232190 hsa-miR-15b-5p 0 0 1
chr16:2232046|2232190 hsa-miR-15b-3p 0 0 1
chr16:2232046|2232190 hsa-miR-152-5p 0 0 1
chr16:2232046|2232190 hsa-miR-152-3p 0 0 1
chr16:2232046|2232190 hsa-miR-195-5p 0 0 1
chr16:2232046|2232190 hsa-miR-195-3p 0 0 1
chr16:2232046|2232190 hsa-miR-326 0 0 1
chr16:2232046|2232190 hsa-miR-148b-5p 0 0 1
chr16:2232046|2232190 hsa-miR-148b-3p 0 0 1
chr16:2232046|2232190 hsa-miR-422a 0 0 1
chr16:2232046|2232190 hsa-miR-424-5p 0 0 1
chr16:2232046|2232190 hsa-miR-424-3p 0 0 1
chr16:2232046|2232190 hsa-miR-497-5p 0 0 1
chr16:2232046|2232190 hsa-miR-497-3p 0 0 1
chr16:2232046|2232190 hsa-miR-593-5p 0 0 1
chr16:2232046|2232190 hsa-miR-593-3p 0 0 1
chr16:2232046|2232190 hsa-miR-637 0 0 1
chr16:2232046|2232190 hsa-miR-657 1 0 1
chr16:2232046|2232190 hsa-miR-541-5p 0 0 1
chr16:2232046|2232190 hsa-miR-541-3p 0 0 1
chr16:2232046|2232190 hsa-miR-486-3p 0 0 1
chr16:2232046|2232190 hsa-miR-615-5p 0 0 1
chr16:2232046|2232190 hsa-miR-654-5p 0 0 1
chr16:2232046|2232190 hsa-miR-331-3p 0 1 1
chr16:2232046|2232190 hsa-miR-330-5p 1 0 1
chr16:2232046|2232190 hsa-miR-16 0 0 1
chr16:2232046|2232190 hsa-miR-378 0 0 1
chr16:2232046|2232190 hsa-miR-644 0 0 1
chr16:2232046|2232190 hsa-miR-24 0 0 1
chr16:2232046|2232190 hsa-miR-1295 0 0 1
chr16:2232046|2232190 hsa-miR-575 1 0 0
chr16:2232046|2232190 hsa-miR-612 1 0 0
chr16:2232046|2232190 hsa-miR-762 1 0 0
chr16:2232046|2232190 hsa-miR-1183 1 0 0
chr16:2232046|2232190 hsa-miR-2278 0 1 0
chr16:2232046|2232190 hsa-miR-3147 1 0 0
chr16:2232046|2232190 hsa-miR-3170 1 0 0
chr16:2232046|2232190 hsa-miR-4259 1 1 0
chr16:2232046|2232190 hsa-miR-4254 0 1 0
chr16:2232046|2232190 hsa-miR-3621 1 0 0
chr16:2232046|2232190 hsa-miR-3665 1 0 0
chr16:2232046|2232190 hsa-miR-4425 1 0 0
chr16:2232046|2232190 hsa-miR-4437 1 0 0
chr16:2232046|2232190 hsa-miR-4651 1 0 0
chr16:2232046|2232190 hsa-miR-4669 1 0 0
chr16:2232046|2232190 hsa-miR-4736 0 1 0
chr16:2232046|2232190 hsa-miR-5090 1 0 0
chr16:2232046|2232190 hsa-miR-5572 1 0 0
chr16:2232046|2232190 hsa-miR-6086 1 0 0
chr16:2232046|2232190 hsa-miR-6860 1 0 0
chr16:2232046|2232190 hsa-miR-8089 1 0 0
chr16:2232046|2232190 hsa-miR-92a-1-5p 1 1 0
chr16:2232046|2232190 hsa-miR-7155-5p 1 1 0
chr16:2232046|2232190 hsa-miR-6747-5p 1 0 0
chr16:2232046|2232190 hsa-miR-125b-1-3p 1 0 0
chr16:2232046|2232190 hsa-miR-27a-5p 0 1 0
chr16:2232046|2232190 hsa-miR-6804-5p 1 0 0
chr16:2232046|2232190 hsa-miR-1227-5p 1 0 0
chr16:2232046|2232190 hsa-miR-505-5p 0 1 0
chr16:2232046|2232190 hsa-miR-24-3p 1 1 0
chr16:2232046|2232190 hsa-miR-6727-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6721-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6776-5p 1 0 0
chr16:2232046|2232190 hsa-miR-659-3p 1 0 0
chr16:2232046|2232190 hsa-miR-6772-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6793-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6798-5p 1 0 0
chr16:2232046|2232190 hsa-miR-2467-3p 1 0 0
chr16:2232046|2232190 hsa-miR-1343-3p 0 1 0
chr16:2232046|2232190 hsa-miR-6852-5p 0 1 0
chr16:2232046|2232190 hsa-miR-4786-3p 1 0 0
chr16:2232046|2232190 hsa-miR-1229-5p 1 0 0
chr16:2232046|2232190 hsa-miR-4640-5p 1 0 0
chr16:2232046|2232190 hsa-miR-296-3p 1 0 0
chr16:2232046|2232190 hsa-miR-6823-5p 1 0 0
chr16:2232046|2232190 hsa-miR-4787-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6789-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6802-5p 1 1 0
chr16:2232046|2232190 hsa-miR-7112-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6826-3p 0 1 0
chr16:2232046|2232190 hsa-miR-6501-3p 0 1 0
chr16:2232046|2232190 hsa-miR-518c-5p 0 1 0
chr16:2232046|2232190 hsa-miR-1207-5p 1 0 0
chr16:2232046|2232190 hsa-miR-4763-3p 1 1 0
chr16:2232046|2232190 hsa-miR-6812-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6816-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6737-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6743-5p 1 1 0
chr16:2232046|2232190 hsa-miR-6752-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6756-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6813-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6722-3p 1 0 0
chr16:2232046|2232190 hsa-miR-6879-5p 1 0 0
chr16:2232046|2232190 hsa-miR-3620-5p 1 0 0
chr16:2232046|2232190 hsa-miR-5196-5p 1 0 0
chr16:2232046|2232190 hsa-miR-1909-3p 1 0 0
chr16:2232046|2232190 hsa-miR-328-5p 1 0 0
chr16:2232046|2232190 hsa-miR-4685-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6846-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6848-5p 1 0 0
chr16:2232046|2232190 hsa-miR-365b-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6511b-5p 1 0 0
chr16:2232046|2232190 hsa-miR-6855-5p 1 1 0
chr16:2232046|2232190 hsa-miR-6791-5p 1 1 0
chr16:2232046|2232190 hsa-miR-769-3p 1 0 0
chr16:2232046|2232190 hsa-miR-6783-3p 0 1 0
chr16:2232046|2232190 hsa-miR-10394-5p 1 0 0
chr16:2232046|2232190 hsa-miR-520d-3p 1 0 0
chr16:2232046|2232190 hsa-miR-6764-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:2232046|2232190
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MGLSPRTCPCPETPETAGSRGGDLLL
Nucleotide Sequence CTGGGCCTAAGCCCCAGGACCTGCCCCTGTCCAGAGACCCCAGAGACTGCTGGCTCCAGGGGAGGGGACCTGCTGCTCTGA
CircID chr16:2232046|2232190
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MPLSRDPRDCWLQGRGPAALSHTLDPTCTE
Nucleotide Sequence CTGCCCCTGTCCAGAGACCCCAGAGACTGCTGGCTCCAGGGGAGGGGACCTGCTGCTCTGAGCCACACCCTGGACCCAACCTGCACTGAG
CircID chr16:2232046|2232190
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MGSLDRGRSWGLGPDASPRWWAHQR
Nucleotide Sequence CTGGGGTCTCTGGACAGGGGCAGGTCCTGGGGCTTAGGCCCAGATGCTTCTCCTAGGTGGTGGGCACATCAAAGA
CircID chr16:2232046|2232190
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MGPGCGSEQQVPSPGASSLWGLWTGAGPGA
Nucleotide Sequence TTGGGTCCAGGGTGTGGCTCAGAGCAGCAGGTCCCCTCCCCTGGAGCCAGCAGTCTCTGGGGTCTCTGGACAGGGGCAGGTCCTGGGGCTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab