CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2277597|2277939
Strand -
CircType exon
Host Gene ENSG00000167972.12;
Algorism CIRI2;
Sequence CTTCGCCCAGCTGAGGTCACGGCCCGGCAGGTGGTAATGGACCATGCCTTGGTGCTCATCTTCCAGGACGCTGCCTGCACAAAGGAGAGACGGTGTTGCTGTGAGCGCCGGGCTGGAGGATCGGGGAGGGTGCCTGGGTGCTCAGCACTGGAGTCCTCGTCCCAGGGATTGGGGAGATGGGACTTGGCGGGGCGAGGCACAGACGCTCCGCACAGCAGATGGGAGAGGCCTAGGTAGGGGCCCAGGGCCCACCCAGTGGGGGCTGCCGGGGCCGGCACACACCTGGAAAGGTCAGGTCCACGAAGGCCTTGAACTCCTCCAGCGCCTCCTGTTGCCCTTCACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2277597|2277939 hsa-miR-29a-5p 0 0 1
chr16:2277597|2277939 hsa-miR-29a-3p 0 0 1
chr16:2277597|2277939 hsa-miR-150-5p 0 0 1
chr16:2277597|2277939 hsa-miR-150-3p 0 0 1
chr16:2277597|2277939 hsa-miR-29c-5p 0 0 1
chr16:2277597|2277939 hsa-miR-29c-3p 0 0 1
chr16:2277597|2277939 hsa-miR-492 0 0 1
chr16:2277597|2277939 hsa-miR-611 0 0 1
chr16:2277597|2277939 hsa-miR-658 0 0 1
chr16:2277597|2277939 hsa-miR-766-5p 0 0 1
chr16:2277597|2277939 hsa-miR-766-3p 0 0 1
chr16:2277597|2277939 hsa-miR-765 0 0 1
chr16:2277597|2277939 hsa-miR-541-5p 0 0 1
chr16:2277597|2277939 hsa-miR-541-3p 0 0 1
chr16:2277597|2277939 hsa-miR-147b-5p 0 0 1
chr16:2277597|2277939 hsa-miR-147b-3p 0 0 1
chr16:2277597|2277939 hsa-miR-1291 0 0 1
chr16:2277597|2277939 hsa-miR-1293 0 0 1
chr16:2277597|2277939 hsa-miR-1825 0 0 1
chr16:2277597|2277939 hsa-miR-296-5p 1 1 1
chr16:2277597|2277939 hsa-miR-512-3p 0 0 1
chr16:2277597|2277939 hsa-miR-532-3p 0 0 1
chr16:2277597|2277939 hsa-miR-885-3p 0 0 1
chr16:2277597|2277939 hsa-miR-199a-5p 0 0 1
chr16:2277597|2277939 hsa-miR-654-5p 0 0 1
chr16:2277597|2277939 hsa-miR-508-5p 0 1 1
chr16:2277597|2277939 hsa-miR-1207-3p 0 0 1
chr16:2277597|2277939 hsa-miR-199b-5p 0 0 1
chr16:2277597|2277939 hsa-miR-885-5p 0 1 1
chr16:2277597|2277939 hsa-miR-550 0 0 1
chr16:2277597|2277939 hsa-miR-7 0 0 1
chr16:2277597|2277939 hsa-miR-29b 0 0 1
chr16:2277597|2277939 hsa-miR-326 0 1 0
chr16:2277597|2277939 hsa-miR-637 0 1 0
chr16:2277597|2277939 hsa-miR-661 0 1 0
chr16:2277597|2277939 hsa-miR-762 1 0 0
chr16:2277597|2277939 hsa-miR-2113 0 1 0
chr16:2277597|2277939 hsa-miR-665 1 0 0
chr16:2277597|2277939 hsa-miR-3131 0 1 0
chr16:2277597|2277939 hsa-miR-3142 0 1 0
chr16:2277597|2277939 hsa-miR-4269 1 0 0
chr16:2277597|2277939 hsa-miR-4292 0 1 0
chr16:2277597|2277939 hsa-miR-3907 1 0 0
chr16:2277597|2277939 hsa-miR-3135b 0 1 0
chr16:2277597|2277939 hsa-miR-4486 0 1 0
chr16:2277597|2277939 hsa-miR-4515 1 0 0
chr16:2277597|2277939 hsa-miR-4535 0 1 0
chr16:2277597|2277939 hsa-miR-4663 0 1 0
chr16:2277597|2277939 hsa-miR-4675 1 0 0
chr16:2277597|2277939 hsa-miR-4686 0 1 0
chr16:2277597|2277939 hsa-miR-4688 1 1 0
chr16:2277597|2277939 hsa-miR-4692 0 1 0
chr16:2277597|2277939 hsa-miR-6165 1 0 0
chr16:2277597|2277939 hsa-miR-7974 1 1 0
chr16:2277597|2277939 hsa-miR-8058 0 1 0
chr16:2277597|2277939 hsa-miR-12116 0 1 0
chr16:2277597|2277939 hsa-miR-141-5p 0 1 0
chr16:2277597|2277939 hsa-miR-370-3p 0 1 0
chr16:2277597|2277939 hsa-miR-500b-3p 0 1 0
chr16:2277597|2277939 hsa-miR-4665-3p 1 0 0
chr16:2277597|2277939 hsa-miR-4726-3p 1 0 0
chr16:2277597|2277939 hsa-miR-6894-5p 1 0 0
chr16:2277597|2277939 hsa-miR-6720-5p 0 1 0
chr16:2277597|2277939 hsa-miR-6892-3p 0 1 0
chr16:2277597|2277939 hsa-miR-5187-5p 0 1 0
chr16:2277597|2277939 hsa-miR-3663-3p 1 1 0
chr16:2277597|2277939 hsa-miR-4695-5p 0 1 0
chr16:2277597|2277939 hsa-miR-4722-5p 1 0 0
chr16:2277597|2277939 hsa-miR-593-5p 1 0 0
chr16:2277597|2277939 hsa-miR-770-5p 1 0 0
chr16:2277597|2277939 hsa-miR-3189-5p 1 0 0
chr16:2277597|2277939 hsa-miR-3605-5p 0 1 0
chr16:2277597|2277939 hsa-miR-6805-5p 0 1 0
chr16:2277597|2277939 hsa-miR-3691-3p 1 1 0
chr16:2277597|2277939 hsa-miR-939-3p 1 1 0
chr16:2277597|2277939 hsa-miR-1226-5p 1 0 0
chr16:2277597|2277939 hsa-miR-6763-3p 1 0 0
chr16:2277597|2277939 hsa-miR-7108-3p 1 0 0
chr16:2277597|2277939 hsa-miR-7161-3p 1 0 0
chr16:2277597|2277939 hsa-miR-3677-3p 1 0 0
chr16:2277597|2277939 hsa-miR-6749-5p 1 0 0
chr16:2277597|2277939 hsa-miR-6878-3p 0 1 0
chr16:2277597|2277939 hsa-miR-3925-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6781-5p 1 0 0
chr16:2277597|2277939 hsa-miR-339-5p 1 0 0
chr16:2277597|2277939 hsa-miR-4707-5p 1 0 0
chr16:2277597|2277939 hsa-miR-5003-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6889-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6813-3p 1 0 0
chr16:2277597|2277939 hsa-miR-6871-3p 0 1 0
chr16:2277597|2277939 hsa-miR-3940-3p 0 1 0
chr16:2277597|2277939 hsa-miR-34a-5p 0 1 0
chr16:2277597|2277939 hsa-miR-331-3p 0 1 0
chr16:2277597|2277939 hsa-miR-4433a-5p 1 0 0
chr16:2277597|2277939 hsa-miR-6789-3p 1 0 0
chr16:2277597|2277939 hsa-miR-3162-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6815-5p 1 1 0
chr16:2277597|2277939 hsa-miR-4632-5p 1 0 0
chr16:2277597|2277939 hsa-miR-6777-5p 1 0 0
chr16:2277597|2277939 hsa-miR-6511b-5p 0 1 0
chr16:2277597|2277939 hsa-miR-10396a-3p 0 1 0
chr16:2277597|2277939 hsa-miR-10396b-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6773-5p 0 1 0
chr16:2277597|2277939 hsa-miR-6724-5p 0 1 0
chr16:2277597|2277939 hsa-miR-10398-5p 1 0 0
chr16:2277597|2277939 hsa-miR-6791-5p 0 1 0
chr16:2277597|2277939 hsa-miR-6753-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6792-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6775-3p 0 1 0
chr16:2277597|2277939 hsa-miR-10392-3p 1 1 0
chr16:2277597|2277939 hsa-miR-6512-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6529-3p 0 1 0
chr16:2277597|2277939 hsa-miR-330-5p 0 1 0
chr16:2277597|2277939 hsa-miR-6744-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6783-3p 1 1 0
chr16:2277597|2277939 hsa-miR-4691-5p 0 1 0
chr16:2277597|2277939 hsa-miR-1234-3p 1 0 0
chr16:2277597|2277939 hsa-miR-6827-3p 0 1 0
chr16:2277597|2277939 hsa-miR-6737-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:2277597|2277939
ORF Type ORF1
Protein Length 66
Nucleotide Length 201
Protein Sequence MDHALVLIFQDAACTKERRCCCERRAGGSGRVPGCSALESSSQGLGRWDLAGRGTDAPHSRWERPR
Nucleotide Sequence ATGGACCATGCCTTGGTGCTCATCTTCCAGGACGCTGCCTGCACAAAGGAGAGACGGTGTTGCTGTGAGCGCCGGGCTGGAGGATCGGGGAGGGTGCCTGGGTGCTCAGCACTGGAGTCCTCGTCCCAGGGATTGGGGAGATGGGACTTGGCGGGGCGAGGCACAGACGCTCCGCACAGCAGATGGGAGAGGCCTAGGTAG

CircID chr16:2277597|2277939
ORF Type ORF2
Protein Length 100
Nucleotide Length 300
Protein Sequence MPWCSSSRTLPAQRRDGVAVSAGLEDRGGCLGAQHWSPRPRDWGDGTWRGEAQTLRTADGRGLGRGPGPTQWGLPGPAHTWKGQVHEGLELLQRLLLPFT
Nucleotide Sequence ATGCCTTGGTGCTCATCTTCCAGGACGCTGCCTGCACAAAGGAGAGACGGTGTTGCTGTGAGCGCCGGGCTGGAGGATCGGGGAGGGTGCCTGGGTGCTCAGCACTGGAGTCCTCGTCCCAGGGATTGGGGAGATGGGACTTGGCGGGGCGAGGCACAGACGCTCCGCACAGCAGATGGGAGAGGCCTAGGTAGGGGCCCAGGGCCCACCCAGTGGGGGCTGCCGGGGCCGGCACACACCTGGAAAGGTCAGGTCCACGAAGGCCTTGAACTCCTCCAGCGCCTCCTGTTGCCCTTCACT

CircID chr16:2277597|2277939
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MEEFKAFVDLTFPGVCRPRQPPLGGPWAPT
Nucleotide Sequence CTGGAGGAGTTCAAGGCCTTCGTGGACCTGACCTTTCCAGGTGTGTGCCGGCCCCGGCAGCCCCCACTGGGTGGGCCCTGGGCCCCTACCTAG

CircID chr16:2277597|2277939
ORF Type ORF4
Protein Length 48
Nucleotide Length 147
Protein Sequence MCLAPPSPISPIPGTRTPVLSTQAPSPILQPGAHSNTVSPLCRQRPGR
Nucleotide Sequence CTGTGCCTCGCCCCGCCAAGTCCCATCTCCCCAATCCCTGGGACGAGGACTCCAGTGCTGAGCACCCAGGCACCCTCCCCGATCCTCCAGCCCGGCGCTCACAGCAACACCGTCTCTCCTTTGTGCAGGCAGCGTCCTGGAAGATGA

CircID chr16:2277597|2277939
ORF Type ORF5
Protein Length 81
Nucleotide Length 243
Protein Sequence MGPYLGLSHLLCGASVPRPAKSHLPNPWDEDSSAEHPGTLPDPPARRSQQHRLSFVQAASWKMSTKAWSITTCRAVTSAGR
Nucleotide Sequence CTGGGCCCCTACCTAGGCCTCTCCCATCTGCTGTGCGGAGCGTCTGTGCCTCGCCCCGCCAAGTCCCATCTCCCCAATCCCTGGGACGAGGACTCCAGTGCTGAGCACCCAGGCACCCTCCCCGATCCTCCAGCCCGGCGCTCACAGCAACACCGTCTCTCCTTTGTGCAGGCAGCGTCCTGGAAGATGAGCACCAAGGCATGGTCCATTACCACCTGCCGGGCCGTGACCTCAGCTGGGCGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites