CircNet

General Information

circRNA Basic Information

CircID	chr16:2323523\|2329854
Strand	-
CircType	exon
Host Gene	ENSG00000167972.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGCTGGAGAGTCATGCCTGTGAGCCCTGGGCACCTCCTGATGTCCTGCGAGGTCACGGTGTTCCCAAACCTCAGGGTTGCCCTGCCCCACTCCAGAGGCTCTCAGGCCCCACCCCGGAGCCCTCTGTGCGGAGCCGCCTCCTCCTGGCCAGTTCCCCAGTAGTCCTGAAGGGAGACCTGCTGTGTGGAGCCTCTTCTGGGACCCAGGTGAAATATCACCTACGGTTCAGTTACACACGGAGAAATTACATGTGGACCCAAACAGGCTCCTTTTTCCTGAAAGAGACAGAAGGCTGGCACACTACTTCCCTTTTCCCGCTTTTCCCAAACCCAGGACCAAGGGAACCTACATCCCCTGATGGCGGAGAACCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:2323523\|2329854	hsa-miR-147a	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:2323523\|2329854
ORF Type	ORF1
Protein Length	124
Nucleotide Length	372
Protein Sequence	VLESHACEPWAPPDVLRGHGVPKPQGCPAPLQRLSGPTPEPSVRSRLLLASSPVVLKGDLLCGASSGTQVKYHLRFSYTRRNYMWTQTGSFFLKETEGWHTTSLFPLFPNPGPREPTSPDGGEP
Nucleotide Sequence	GTGCTGGAGAGTCATGCCTGTGAGCCCTGGGCACCTCCTGATGTCCTGCGAGGTCACGGTGTTCCCAAACCTCAGGGTTGCCCTGCCCCACTCCAGAGGCTCTCAGGCCCCACCCCGGAGCCCTCTGTGCGGAGCCGCCTCCTCCTGGCCAGTTCCCCAGTAGTCCTGAAGGGAGACCTGCTGTGTGGAGCCTCTTCTGGGACCCAGGTGAAATATCACCTACGGTTCAGTTACACACGGAGAAATTACATGTGGACCCAAACAGGCTCCTTTTTCCTGAAAGAGACAGAAGGCTGGCACACTACTTCCCTTTTCCCGCTTTTCCCAAACCCAGGACCAAGGGAACCTACATCCCCTGATGGCGGAGAACCT

CircID	chr16:2323523\|2329854
ORF Type	ORF2
Protein Length	50
Nucleotide Length	150
Protein Sequence	MPVSPGHLLMSCEVTVFPNLRVALPHSRGSQAPPRSPLCGAASSWPVPQ*
Nucleotide Sequence	ATGCCTGTGAGCCCTGGGCACCTCCTGATGTCCTGCGAGGTCACGGTGTTCCCAAACCTCAGGGTTGCCCTGCCCCACTCCAGAGGCTCTCAGGCCCCACCCCGGAGCCCTCTGTGCGGAGCCGCCTCCTCCTGGCCAGTTCCCCAGTAG

CircID	chr16:2323523\|2329854
ORF Type	ORF3
Protein Length	94
Nucleotide Length	282
Protein Sequence	LPCPTPEALRPHPGALCAEPPPPGQFPSSPEGRPAVWSLFWDPGEISPTVQLHTEKLHVDPNRLLFPERDRRLAHYFPFPAFPKPRTKGTYIP*
Nucleotide Sequence	TTGCCCTGCCCCACTCCAGAGGCTCTCAGGCCCCACCCCGGAGCCCTCTGTGCGGAGCCGCCTCCTCCTGGCCAGTTCCCCAGTAGTCCTGAAGGGAGACCTGCTGTGTGGAGCCTCTTCTGGGACCCAGGTGAAATATCACCTACGGTTCAGTTACACACGGAGAAATTACATGTGGACCCAAACAGGCTCCTTTTTCCTGAAAGAGACAGAAGGCTGGCACACTACTTCCCTTTTCCCGCTTTTCCCAAACCCAGGACCAAGGGAACCTACATCCCCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:2323523\|2329854	ELAVL1	1	0	0
chr16:2323523\|2329854	YTHDF1	0	0	1
chr16:2323523\|2329854	TNRC6A	0	0	1
chr16:2323523\|2329854	FMR1	0	1	2
chr16:2323523\|2329854	FUS	1	0	1
chr16:2323523\|2329854	DGCR8	0	1	0
chr16:2323523\|2329854	NOP58	0	1	1
chr16:2323523\|2329854	ADAR	0	1	0
chr16:2323523\|2329854	U2AF2	0	3	1
chr16:2323523\|2329854	DDX54	0	1	7
chr16:2323523\|2329854	PTBP1	1	0	1
chr16:2323523\|2329854	DDX3X	1	0	2
chr16:2323523\|2329854	HNRNPA1	0	1	0
chr16:2323523\|2329854	RANGAP1	0	0	2
chr16:2323523\|2329854	SND1	0	1	1
chr16:2323523\|2329854	IGF2BP1	0	0	2
chr16:2323523\|2329854	IGF2BP3	0	1	1
chr16:2323523\|2329854	IGF2BP2	1	1	3
chr16:2323523\|2329854	CSTF2T	0	1	1
chr16:2323523\|2329854	AIFM1	0	0	1
chr16:2323523\|2329854	EIF4A3	2	2	3
chr16:2323523\|2329854	FBL	0	0	1

CircRNA Information