CircNet

General Information

circRNA Basic Information

CircID	chr16:23532657\|23535360
Strand	-
CircType	exon
Host Gene	ENSG00000103356.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTATGACAATCGGTGCAGGAACATGAGCCAGGAGCAGGTGGCCCAGAAGCTGGCCAAGGACCCCAAGCCTGCGATCCGCTTCCGCCTGGAGCAGGTGGTGCCAGCCTTCCAGGACCTGGTCTATGGCTGGAATAGGCATGAAGTGGCCAGCGTGGAGGGAGACCCAGTCATCATGAAGAGCGACGGCTTCCCCACATACCACCTGGCCTGCGTGGTGGACGACCACCACATGGGCATCAGCCACGTGCTGCGAGGCTCTGAGTGGCTCGTCTCCACTGCCAAGCACCTGCTCCTCTACCAGGCCCTGGGCTGGCAGCCACCCCACTTCGCCCACCTGCCCCTGCTCCTCAACAGGGATGGCAGCAAGCTCTCCAAGAGGCAAGGGGACGTTTTCCTGGAGCACTTTGCTGCTGATGGCTTCCTGCCCGATTCCTTGTTGGACATCATCACCAACTGTGGCTCAGGTTTTGCAGAGAACCAAATGGGCAGGACCCTGCCGGAGCTGATCACACAGTTCAACCTGACACAGGTCACCTGTCACTCAGCCCTGCTGGACCTGGAGAAGCTCCCAGAATTCAACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:23532657\|23535360	hsa-miR-210-5p	0	1	1
chr16:23532657\|23535360	hsa-miR-24-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:23532657\|23535360
ORF Type	ORF1
Protein Length	186
Nucleotide Length	558
Protein Sequence	MSQEQVAQKLAKDPKPAIRFRLEQVVPAFQDLVYGWNRHEVASVEGDPVIMKSDGFPTYHLACVVDDHHMGISHVLRGSEWLVSTAKHLLLYQALGWQPPHFAHLPLLLNRDGSKLSKRQGDVFLEHFAADGFLPDSLLDIITNCGSGFAENQMGRTLPELITQFNLTQVTCHSALLDLEKLPEFN
Nucleotide Sequence	ATGAGCCAGGAGCAGGTGGCCCAGAAGCTGGCCAAGGACCCCAAGCCTGCGATCCGCTTCCGCCTGGAGCAGGTGGTGCCAGCCTTCCAGGACCTGGTCTATGGCTGGAATAGGCATGAAGTGGCCAGCGTGGAGGGAGACCCAGTCATCATGAAGAGCGACGGCTTCCCCACATACCACCTGGCCTGCGTGGTGGACGACCACCACATGGGCATCAGCCACGTGCTGCGAGGCTCTGAGTGGCTCGTCTCCACTGCCAAGCACCTGCTCCTCTACCAGGCCCTGGGCTGGCAGCCACCCCACTTCGCCCACCTGCCCCTGCTCCTCAACAGGGATGGCAGCAAGCTCTCCAAGAGGCAAGGGGACGTTTTCCTGGAGCACTTTGCTGCTGATGGCTTCCTGCCCGATTCCTTGTTGGACATCATCACCAACTGTGGCTCAGGTTTTGCAGAGAACCAAATGGGCAGGACCCTGCCGGAGCTGATCACACAGTTCAACCTGACACAGGTCACCTGTCACTCAGCCCTGCTGGACCTGGAGAAGCTCCCAGAATTCAAC

CircID	chr16:23532657\|23535360
ORF Type	ORF2
Protein Length	134
Nucleotide Length	402
Protein Sequence	VLQENVPLPLGELAAIPVEEQGQVGEVGWLPAQGLVEEQVLGSGDEPLRASQHVADAHVVVVHHAGQVVCGEAVALHDDWVSLHAGHFMPIPAIDQVLEGWHHLLQAEADRRLGVLGQLLGHLLLAHVPAPIVI
Nucleotide Sequence	GTGCTCCAGGAAAACGTCCCCTTGCCTCTTGGAGAGCTTGCTGCCATCCCTGTTGAGGAGCAGGGGCAGGTGGGCGAAGTGGGGTGGCTGCCAGCCCAGGGCCTGGTAGAGGAGCAGGTGCTTGGCAGTGGAGACGAGCCACTCAGAGCCTCGCAGCACGTGGCTGATGCCCATGTGGTGGTCGTCCACCACGCAGGCCAGGTGGTATGTGGGGAAGCCGTCGCTCTTCATGATGACTGGGTCTCCCTCCACGCTGGCCACTTCATGCCTATTCCAGCCATAGACCAGGTCCTGGAAGGCTGGCACCACCTGCTCCAGGCGGAAGCGGATCGCAGGCTTGGGGTCCTTGGCCAGCTTCTGGGCCACCTGCTCCTGGCTCATGTTCCTGCACCGATTGTCATA

CircID	chr16:23532657\|23535360
ORF Type	ORF3
Protein Length	51
Nucleotide Length	153
Protein Sequence	MMSNKESGRKPSAAKCSRKTSPCLLESLLPSLLRSRGRWAKWGGCQPRAW*
Nucleotide Sequence	ATGATGTCCAACAAGGAATCGGGCAGGAAGCCATCAGCAGCAAAGTGCTCCAGGAAAACGTCCCCTTGCCTCTTGGAGAGCTTGCTGCCATCCCTGTTGAGGAGCAGGGGCAGGTGGGCGAAGTGGGGTGGCTGCCAGCCCAGGGCCTGGTAG

CircID	chr16:23532657\|23535360
ORF Type	ORF4
Protein Length	50
Nucleotide Length	150
Protein Sequence	MAASSPRGKGTFSWSTLLLMASCPIPCWTSSPTVAQVLQRTKWAGPCRS*
Nucleotide Sequence	ATGGCAGCAAGCTCTCCAAGAGGCAAGGGGACGTTTTCCTGGAGCACTTTGCTGCTGATGGCTTCCTGCCCGATTCCTTGTTGGACATCATCACCAACTGTGGCTCAGGTTTTGCAGAGAACCAAATGGGCAGGACCCTGCCGGAGCTGA

CircID	chr16:23532657\|23535360
ORF Type	ORF5
Protein Length	39
Nucleotide Length	117
Protein Sequence	MPMWWSSTTQARWYVGKPSLFMMTGSPSTLATSCLFQP*
Nucleotide Sequence	ATGCCCATGTGGTGGTCGTCCACCACGCAGGCCAGGTGGTATGTGGGGAAGCCGTCGCTCTTCATGATGACTGGGTCTCCCTCCACGCTGGCCACTTCATGCCTATTCCAGCCATAG

CircID	chr16:23532657\|23535360
ORF Type	ORF6
Protein Length	56
Nucleotide Length	168
Protein Sequence	WLPARFLVGHHHQLWLRFCREPNGQDPAGADHTVQPDTGHLSLSPAGPGEAPRIQQ
Nucleotide Sequence	TGGCTTCCTGCCCGATTCCTTGTTGGACATCATCACCAACTGTGGCTCAGGTTTTGCAGAGAACCAAATGGGCAGGACCCTGCCGGAGCTGATCACACAGTTCAACCTGACACAGGTCACCTGTCACTCAGCCCTGCTGGACCTGGAGAAGCTCCCAGAATTCAACAG

CircID	chr16:23532657\|23535360
ORF Type	ORF7
Protein Length	55
Nucleotide Length	165
Protein Sequence	LGLPPRWPLHAYSSHRPGPGRLAPPAPGGSGSQAWGPWPASGPPAPGSCSCTDCH
Nucleotide Sequence	CTGGGTCTCCCTCCACGCTGGCCACTTCATGCCTATTCCAGCCATAGACCAGGTCCTGGAAGGCTGGCACCACCTGCTCCAGGCGGAAGCGGATCGCAGGCTTGGGGTCCTTGGCCAGCTTCTGGGCCACCTGCTCCTGGCTCATGTTCCTGCACCGATTGTCAT

CircID	chr16:23532657\|23535360
ORF Type	ORF8
Protein Length	51
Nucleotide Length	153
Protein Sequence	VARLHCQAPAPLPGPGLAATPLRPPAPAPQQGWQQALQEARGRFPGALCC*
Nucleotide Sequence	GTGGCTCGTCTCCACTGCCAAGCACCTGCTCCTCTACCAGGCCCTGGGCTGGCAGCCACCCCACTTCGCCCACCTGCCCCTGCTCCTCAACAGGGATGGCAGCAAGCTCTCCAAGAGGCAAGGGGACGTTTTCCTGGAGCACTTTGCTGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:23532657\|23535360	NOP56	1	0	0
chr16:23532657\|23535360	MOV10	0	0	1
chr16:23532657\|23535360	ELAVL1	0	4	3
chr16:23532657\|23535360	SF3B4	1	0	0
chr16:23532657\|23535360	PRPF8	0	3	0
chr16:23532657\|23535360	FMR1	0	0	3
chr16:23532657\|23535360	GNL3	0	0	1
chr16:23532657\|23535360	DGCR8	0	2	0
chr16:23532657\|23535360	SRSF7	0	1	3
chr16:23532657\|23535360	SRSF1	0	3	9
chr16:23532657\|23535360	NOP58	0	4	2
chr16:23532657\|23535360	U2AF1	0	3	1
chr16:23532657\|23535360	U2AF2	4	11	0
chr16:23532657\|23535360	SRSF9	0	0	3
chr16:23532657\|23535360	TIAL1	0	1	0
chr16:23532657\|23535360	DDX54	1	0	2
chr16:23532657\|23535360	RBM10	1	1	0
chr16:23532657\|23535360	HNRNPA2B1	0	1	0
chr16:23532657\|23535360	SF3A3	1	0	0
chr16:23532657\|23535360	FIP1L1	1	0	0
chr16:23532657\|23535360	PTBP1	0	1	0
chr16:23532657\|23535360	HNRNPC	4	0	4
chr16:23532657\|23535360	TRA2A	0	0	1
chr16:23532657\|23535360	KHSRP	0	3	0
chr16:23532657\|23535360	ZC3H7B	1	0	0
chr16:23532657\|23535360	SMNDC1	0	0	1
chr16:23532657\|23535360	HNRNPA1	0	1	0
chr16:23532657\|23535360	RANGAP1	0	0	1
chr16:23532657\|23535360	LIN28A	0	1	1
chr16:23532657\|23535360	FXR1	1	0	1
chr16:23532657\|23535360	BCCIP	0	1	0
chr16:23532657\|23535360	IGF2BP1	0	0	3
chr16:23532657\|23535360	GTF2F1	0	1	0
chr16:23532657\|23535360	IGF2BP3	0	0	2
chr16:23532657\|23535360	IGF2BP2	0	2	1
chr16:23532657\|23535360	FTO	0	1	0
chr16:23532657\|23535360	TARDBP	0	1	0
chr16:23532657\|23535360	STAU1	1	0	0
chr16:23532657\|23535360	FBL	0	1	3
chr16:23532657\|23535360	BUD13	2	1	4
chr16:23532657\|23535360	RBFOX2	1	10	0
chr16:23532657\|23535360	RTCB	0	0	1
chr16:23532657\|23535360	DDX42	0	1	0
chr16:23532657\|23535360	CSTF2T	0	0	2
chr16:23532657\|23535360	TIA1	1	4	0
chr16:23532657\|23535360	NONO	0	1	0
chr16:23532657\|23535360	XRN2	0	0	1
chr16:23532657\|23535360	HNRNPK	0	2	0
chr16:23532657\|23535360	ALKBH5	0	0	1
chr16:23532657\|23535360	AGO1	0	0	1
chr16:23532657\|23535360	EIF4A3	2	3	6
chr16:23532657\|23535360	AGO2	0	1	1

CircRNA Information