CircRNA Information

General Information
circRNA Basic Information
CircID chr16:23756154|23756449
Strand +
CircType exon
Host Gene ENSG00000166869.2;
Algorism CIRI2;
Sequence CTGCAGCATCTCATGCCTGGAGATCTTCCCATCGCGATCCAGGTCATAGAGCTGAAATGCATCTGGGGAGAGGGTGGGAGGGGGAAAGGAAGGTAGGTCTTCCCTGGCTCTCTTCCAGCAGCCACCTTCCTTCCCCCCACCTTGGAGGAGGGGGGAGGTTGTCAATGCCCTCAGGAAGGGAGTGGGAGATCCCTGGAGCCTGTCCCTGGTGTGGGTACATCTGCATTCTCACTTGTGCAGGTCCTCACAAACTCACAGTGAAGTTTGTTCCTTCTGCTGTTGAGAGGTTCAGGTTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:23756154|23756449 hsa-miR-143-5p 0 0 1
chr16:23756154|23756449 hsa-miR-143-3p 0 0 1
chr16:23756154|23756449 hsa-miR-150-5p 0 0 1
chr16:23756154|23756449 hsa-miR-150-3p 0 0 1
chr16:23756154|23756449 hsa-miR-484 0 1 1
chr16:23756154|23756449 hsa-miR-492 0 1 1
chr16:23756154|23756449 hsa-miR-495-5p 0 0 1
chr16:23756154|23756449 hsa-miR-495-3p 0 0 1
chr16:23756154|23756449 hsa-miR-580-5p 0 0 1
chr16:23756154|23756449 hsa-miR-580-3p 0 0 1
chr16:23756154|23756449 hsa-miR-586 0 0 1
chr16:23756154|23756449 hsa-miR-604 0 0 1
chr16:23756154|23756449 hsa-miR-619-5p 0 0 1
chr16:23756154|23756449 hsa-miR-619-3p 0 0 1
chr16:23756154|23756449 hsa-miR-625-5p 0 0 1
chr16:23756154|23756449 hsa-miR-625-3p 0 0 1
chr16:23756154|23756449 hsa-miR-631 0 0 1
chr16:23756154|23756449 hsa-miR-647 0 0 1
chr16:23756154|23756449 hsa-miR-421 0 0 1
chr16:23756154|23756449 hsa-miR-758-5p 0 0 1
chr16:23756154|23756449 hsa-miR-758-3p 0 0 1
chr16:23756154|23756449 hsa-miR-766-5p 0 0 1
chr16:23756154|23756449 hsa-miR-766-3p 0 0 1
chr16:23756154|23756449 hsa-miR-298 0 1 1
chr16:23756154|23756449 hsa-miR-922 0 1 1
chr16:23756154|23756449 hsa-miR-1200 0 1 1
chr16:23756154|23756449 hsa-miR-1208 0 0 1
chr16:23756154|23756449 hsa-miR-1287-5p 0 0 1
chr16:23756154|23756449 hsa-miR-1287-3p 0 0 1
chr16:23756154|23756449 hsa-miR-1294 0 0 1
chr16:23756154|23756449 hsa-miR-1256 0 1 1
chr16:23756154|23756449 hsa-miR-1252-5p 0 0 1
chr16:23756154|23756449 hsa-miR-1252-3p 0 0 1
chr16:23756154|23756449 hsa-miR-1224-5p 0 0 1
chr16:23756154|23756449 hsa-miR-532-3p 0 1 1
chr16:23756154|23756449 hsa-miR-1224-3p 1 0 1
chr16:23756154|23756449 hsa-miR-1260 0 0 1
chr16:23756154|23756449 hsa-miR-1280 0 0 1
chr16:23756154|23756449 hsa-miR-7 0 0 1
chr16:23756154|23756449 hsa-miR-549 0 0 1
chr16:23756154|23756449 hsa-miR-936 0 1 0
chr16:23756154|23756449 hsa-miR-1260a 0 1 0
chr16:23756154|23756449 hsa-miR-4270 1 0 0
chr16:23756154|23756449 hsa-miR-4271 0 1 0
chr16:23756154|23756449 hsa-miR-4287 0 1 0
chr16:23756154|23756449 hsa-miR-3661 0 1 0
chr16:23756154|23756449 hsa-miR-4533 0 1 0
chr16:23756154|23756449 hsa-miR-4673 0 1 0
chr16:23756154|23756449 hsa-miR-4751 0 1 0
chr16:23756154|23756449 hsa-miR-5193 1 1 0
chr16:23756154|23756449 hsa-miR-5681b 0 1 0
chr16:23756154|23756449 hsa-miR-211-3p 1 1 0
chr16:23756154|23756449 hsa-miR-6747-3p 0 1 0
chr16:23756154|23756449 hsa-miR-3150a-3p 0 1 0
chr16:23756154|23756449 hsa-miR-4687-3p 1 1 0
chr16:23756154|23756449 hsa-miR-6892-3p 1 1 0
chr16:23756154|23756449 hsa-miR-3692-5p 0 1 0
chr16:23756154|23756449 hsa-miR-4655-5p 1 0 0
chr16:23756154|23756449 hsa-miR-7845-5p 0 1 0
chr16:23756154|23756449 hsa-miR-6858-3p 1 0 0
chr16:23756154|23756449 hsa-miR-4713-5p 0 1 0
chr16:23756154|23756449 hsa-miR-7109-5p 0 1 0
chr16:23756154|23756449 hsa-miR-1226-5p 1 1 0
chr16:23756154|23756449 hsa-miR-7108-3p 1 1 0
chr16:23756154|23756449 hsa-miR-1247-5p 1 0 0
chr16:23756154|23756449 hsa-miR-4640-5p 0 1 0
chr16:23756154|23756449 hsa-miR-6753-5p 1 1 0
chr16:23756154|23756449 hsa-miR-7113-3p 1 0 0
chr16:23756154|23756449 hsa-miR-3667-3p 0 1 0
chr16:23756154|23756449 hsa-miR-4667-3p 0 1 0
chr16:23756154|23756449 hsa-miR-149-3p 0 1 0
chr16:23756154|23756449 hsa-miR-4733-3p 0 1 0
chr16:23756154|23756449 hsa-miR-6830-5p 0 1 0
chr16:23756154|23756449 hsa-miR-6887-3p 1 1 0
chr16:23756154|23756449 hsa-miR-6837-3p 0 1 0
chr16:23756154|23756449 hsa-miR-4632-3p 1 0 0
chr16:23756154|23756449 hsa-miR-2355-5p 0 1 0
chr16:23756154|23756449 hsa-miR-6865-3p 0 1 0
chr16:23756154|23756449 hsa-miR-6826-3p 0 1 0
chr16:23756154|23756449 hsa-miR-7113-5p 0 1 0
chr16:23756154|23756449 hsa-miR-4749-3p 1 0 0
chr16:23756154|23756449 hsa-miR-6795-3p 1 0 0
chr16:23756154|23756449 hsa-miR-6883-3p 1 0 0
chr16:23756154|23756449 hsa-miR-6734-3p 0 1 0
chr16:23756154|23756449 hsa-miR-1249-3p 1 0 0
chr16:23756154|23756449 hsa-miR-499b-5p 0 1 0
chr16:23756154|23756449 hsa-miR-3162-3p 1 0 0
chr16:23756154|23756449 hsa-miR-3156-3p 0 1 0
chr16:23756154|23756449 hsa-miR-6865-5p 0 1 0
chr16:23756154|23756449 hsa-miR-6775-5p 1 0 0
chr16:23756154|23756449 hsa-miR-6743-5p 1 0 0
chr16:23756154|23756449 hsa-miR-6815-5p 0 1 0
chr16:23756154|23756449 hsa-miR-6797-5p 0 1 0
chr16:23756154|23756449 hsa-miR-4685-3p 0 1 0
chr16:23756154|23756449 hsa-miR-6780b-5p 0 1 0
chr16:23756154|23756449 hsa-miR-4749-5p 1 0 0
chr16:23756154|23756449 hsa-miR-6795-5p 0 1 0
chr16:23756154|23756449 hsa-miR-6887-5p 0 1 0
chr16:23756154|23756449 hsa-miR-7843-5p 0 1 0
chr16:23756154|23756449 hsa-miR-4747-5p 0 1 0
chr16:23756154|23756449 hsa-miR-6756-3p 1 1 0
chr16:23756154|23756449 hsa-miR-6784-3p 1 0 0
chr16:23756154|23756449 hsa-miR-6862-3p 1 0 0
chr16:23756154|23756449 hsa-miR-6837-5p 1 0 0
chr16:23756154|23756449 hsa-miR-4645-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:23756154|23756449
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence LQHLMPGDLPIAIQVIELKCIWGEGGRGKGR
Nucleotide Sequence CTGCAGCATCTCATGCCTGGAGATCTTCCCATCGCGATCCAGGTCATAGAGCTGAAATGCATCTGGGGAGAGGGTGGGAGGGGGAAAGGAAGGTAG
CircID chr16:23756154|23756449
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MEEGGGCQCPQEGSGRSLEPVPGVGTSAFSLVQVLTNSQ
Nucleotide Sequence TTGGAGGAGGGGGGAGGTTGTCAATGCCCTCAGGAAGGGAGTGGGAGATCCCTGGAGCCTGTCCCTGGTGTGGGTACATCTGCATTCTCACTTGTGCAGGTCCTCACAAACTCACAGTGA
CircID chr16:23756154|23756449
ORF Type ORF3
Protein Length 59
Nucleotide Length 180
Protein Sequence MALFQQPPSFPPPWRRGEVVNALRKGVGDPWSLSLVWVHLHSHLCRSSQTHSEVCSFCC
Nucleotide Sequence CTGGCTCTCTTCCAGCAGCCACCTTCCTTCCCCCCACCTTGGAGGAGGGGGGAGGTTGTCAATGCCCTCAGGAAGGGAGTGGGAGATCCCTGGAGCCTGTCCCTGGTGTGGGTACATCTGCATTCTCACTTGTGCAGGTCCTCACAAACTCACAGTGAAGTTTGTTCCTTCTGCTGTTGA
CircID chr16:23756154|23756449
ORF Type ORF4
Protein Length 80
Nucleotide Length 240
Protein Sequence MHLGRGWEGERKVGLPWLSSSSHLPSPHLGGGGRLSMPSGREWEIPGACPWCGYICILTCAGPHKLTVKFVPSAVERFRF
Nucleotide Sequence ATGCATCTGGGGAGAGGGTGGGAGGGGGAAAGGAAGGTAGGTCTTCCCTGGCTCTCTTCCAGCAGCCACCTTCCTTCCCCCCACCTTGGAGGAGGGGGGAGGTTGTCAATGCCCTCAGGAAGGGAGTGGGAGATCCCTGGAGCCTGTCCCTGGTGTGGGTACATCTGCATTCTCACTTGTGCAGGTCCTCACAAACTCACAGTGAAGTTTGTTCCTTCTGCTGTTGAGAGGTTCAGGTTT
CircID chr16:23756154|23756449
ORF Type ORF5
Protein Length 60
Nucleotide Length 183
Protein Sequence MQMYPHQGQAPGISHSLPEGIDNLPPPPRWGEGRWLLEESQGRPTFLSPSHPLPRCISAL
Nucleotide Sequence ATGCAGATGTACCCACACCAGGGACAGGCTCCAGGGATCTCCCACTCCCTTCCTGAGGGCATTGACAACCTCCCCCCTCCTCCAAGGTGGGGGGAAGGAAGGTGGCTGCTGGAAGAGAGCCAGGGAAGACCTACCTTCCTTTCCCCCTCCCACCCTCTCCCCAGATGCATTTCAGCTCTATGA
CircID chr16:23756154|23756449
ORF Type ORF6
Protein Length 58
Nucleotide Length 174
Protein Sequence MRALTTSPLLQGGGKEGGCWKRAREDLPSFPPPTLSPDAFQLYDLDRDGKISRHEMLQ
Nucleotide Sequence CTGAGGGCATTGACAACCTCCCCCCTCCTCCAAGGTGGGGGGAAGGAAGGTGGCTGCTGGAAGAGAGCCAGGGAAGACCTACCTTCCTTTCCCCCTCCCACCCTCTCCCCAGATGCATTTCAGCTCTATGACCTGGATCGCGATGGGAAGATCTCCAGGCATGAGATGCTGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab