CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2596815|2597005
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTGCACTCACCCAGGGGCAGGGGACTTCCTGCCCCACCAGGCCCAGTTTCTAAGGTCACAGGGGATGCAGCACAGGCCTCTGCTGCTGAGATGGCGCAGACAGCCCATCCAGATCGGGCCCATGGCTCCCCTGGCCCCTCTGCTCTGCCTGGGACAGAAGCCTGCTCTCGGTAGCCGGCCTCCACCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2596815|2597005 hsa-miR-15a-5p 0 0 1
chr16:2596815|2597005 hsa-miR-15a-3p 0 0 1
chr16:2596815|2597005 hsa-miR-214-5p 0 0 1
chr16:2596815|2597005 hsa-miR-214-3p 0 0 1
chr16:2596815|2597005 hsa-miR-15b-5p 0 0 1
chr16:2596815|2597005 hsa-miR-15b-3p 0 0 1
chr16:2596815|2597005 hsa-miR-195-5p 0 0 1
chr16:2596815|2597005 hsa-miR-195-3p 0 0 1
chr16:2596815|2597005 hsa-miR-346 0 0 1
chr16:2596815|2597005 hsa-miR-424-5p 0 0 1
chr16:2596815|2597005 hsa-miR-424-3p 0 0 1
chr16:2596815|2597005 hsa-miR-497-5p 0 0 1
chr16:2596815|2597005 hsa-miR-497-3p 0 0 1
chr16:2596815|2597005 hsa-miR-626 0 0 1
chr16:2596815|2597005 hsa-miR-632 0 0 1
chr16:2596815|2597005 hsa-miR-650 0 0 1
chr16:2596815|2597005 hsa-miR-541-5p 0 0 1
chr16:2596815|2597005 hsa-miR-541-3p 0 0 1
chr16:2596815|2597005 hsa-miR-922 0 0 1
chr16:2596815|2597005 hsa-miR-939-5p 0 0 1
chr16:2596815|2597005 hsa-miR-939-3p 0 0 1
chr16:2596815|2597005 hsa-miR-1293 0 0 1
chr16:2596815|2597005 hsa-miR-1262 0 0 1
chr16:2596815|2597005 hsa-miR-296-5p 0 0 1
chr16:2596815|2597005 hsa-miR-486-3p 0 0 1
chr16:2596815|2597005 hsa-miR-324-5p 1 0 1
chr16:2596815|2597005 hsa-miR-423-5p 0 0 1
chr16:2596815|2597005 hsa-miR-654-5p 0 0 1
chr16:2596815|2597005 hsa-miR-331-3p 0 0 1
chr16:2596815|2597005 hsa-miR-324-3p 0 0 1
chr16:2596815|2597005 hsa-miR-16 0 0 1
chr16:2596815|2597005 hsa-miR-1538 1 0 0
chr16:2596815|2597005 hsa-miR-2861 1 0 0
chr16:2596815|2597005 hsa-miR-4466 1 0 0
chr16:2596815|2597005 hsa-miR-4488 1 0 0
chr16:2596815|2597005 hsa-miR-1587 1 0 0
chr16:2596815|2597005 hsa-miR-4656 1 0 0
chr16:2596815|2597005 hsa-miR-4673 1 0 0
chr16:2596815|2597005 hsa-miR-4741 1 0 0
chr16:2596815|2597005 hsa-miR-6085 1 0 0
chr16:2596815|2597005 hsa-miR-6165 1 0 0
chr16:2596815|2597005 hsa-miR-4687-3p 1 0 0
chr16:2596815|2597005 hsa-miR-6510-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6089 1 0 0
chr16:2596815|2597005 hsa-miR-6880-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6806-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6772-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6827-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6798-5p 1 0 0
chr16:2596815|2597005 hsa-miR-2467-3p 1 0 0
chr16:2596815|2597005 hsa-miR-6786-5p 1 0 0
chr16:2596815|2597005 hsa-miR-4640-5p 1 0 0
chr16:2596815|2597005 hsa-miR-4690-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6824-5p 1 0 0
chr16:2596815|2597005 hsa-miR-4763-3p 1 0 0
chr16:2596815|2597005 hsa-miR-6787-5p 1 0 0
chr16:2596815|2597005 hsa-miR-1343-5p 1 0 0
chr16:2596815|2597005 hsa-miR-5001-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6743-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6756-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6722-3p 1 0 0
chr16:2596815|2597005 hsa-miR-3620-5p 1 0 0
chr16:2596815|2597005 hsa-miR-1237-5p 1 0 0
chr16:2596815|2597005 hsa-miR-1909-3p 1 0 0
chr16:2596815|2597005 hsa-miR-328-5p 1 0 0
chr16:2596815|2597005 hsa-miR-4649-5p 1 0 0
chr16:2596815|2597005 hsa-miR-4726-5p 1 0 0
chr16:2596815|2597005 hsa-miR-4745-3p 1 0 0
chr16:2596815|2597005 hsa-miR-6735-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6511b-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6724-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6762-5p 1 0 0
chr16:2596815|2597005 hsa-miR-6820-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:2596815|2597005
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence LCTHPGAGDFLPHQAQFLRSQGMQHRPLLLRWRRQPIQIGPMAPLAPLLCLGQKPALGSRPPP
Nucleotide Sequence CTGTGCACTCACCCAGGGGCAGGGGACTTCCTGCCCCACCAGGCCCAGTTTCTAAGGTCACAGGGGATGCAGCACAGGCCTCTGCTGCTGAGATGGCGCAGACAGCCCATCCAGATCGGGCCCATGGCTCCCCTGGCCCCTCTGCTCTGCCTGGGACAGAAGCCTGCTCTCGGTAGCCGGCCTCCACCC
CircID chr16:2596815|2597005
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MAQTAHPDRAHGSPGPSALPGTEACSR
Nucleotide Sequence ATGGCGCAGACAGCCCATCCAGATCGGGCCCATGGCTCCCCTGGCCCCTCTGCTCTGCCTGGGACAGAAGCCTGCTCTCGGTAG
CircID chr16:2596815|2597005
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MGPIWMGCLRHLSSRGLCCIPCDLRNWAWWGRKSPAPG
Nucleotide Sequence ATGGGCCCGATCTGGATGGGCTGTCTGCGCCATCTCAGCAGCAGAGGCCTGTGCTGCATCCCCTGTGACCTTAGAAACTGGGCCTGGTGGGGCAGGAAGTCCCCTGCCCCTGGGTGA
CircID chr16:2596815|2597005
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MSQAEQRGQGSHGPDLDGLSAPSQQQRPVLHPL
Nucleotide Sequence CTGTCCCAGGCAGAGCAGAGGGGCCAGGGGAGCCATGGGCCCGATCTGGATGGGCTGTCTGCGCCATCTCAGCAGCAGAGGCCTGTGCTGCATCCCCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab