CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2599762|2599875
Strand +
CircType exon
Host Gene ENSG00000140992.17;
Algorism CIRI2;
Sequence GCACGGAAGAGTCTCCCCAAGCAGCCCAGCCGAGTGCTCCAATTAAAGCCACGTCCCTGCTCCACTTGTTTCCCTATAACCAGACGCCCTGAGAGATCTGAGAGAGCCACTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2599762|2599875 hsa-miR-760 0 0 1
chr16:2599762|2599875 hsa-miR-939-5p 0 0 1
chr16:2599762|2599875 hsa-miR-939-3p 0 0 1
chr16:2599762|2599875 hsa-miR-1236-5p 0 0 1
chr16:2599762|2599875 hsa-miR-1236-3p 0 0 1
chr16:2599762|2599875 hsa-miR-1266-5p 0 0 1
chr16:2599762|2599875 hsa-miR-1266-3p 0 0 1
chr16:2599762|2599875 hsa-miR-644a 1 0 0
chr16:2599762|2599875 hsa-miR-663a 1 0 0
chr16:2599762|2599875 hsa-miR-762 1 0 0
chr16:2599762|2599875 hsa-miR-1268a 1 0 0
chr16:2599762|2599875 hsa-miR-2861 1 0 0
chr16:2599762|2599875 hsa-miR-3141 1 0 0
chr16:2599762|2599875 hsa-miR-3147 1 0 0
chr16:2599762|2599875 hsa-miR-3153 1 0 0
chr16:2599762|2599875 hsa-miR-3183 1 1 0
chr16:2599762|2599875 hsa-miR-4270 1 0 0
chr16:2599762|2599875 hsa-miR-3615 0 1 0
chr16:2599762|2599875 hsa-miR-3665 1 0 0
chr16:2599762|2599875 hsa-miR-3918 1 0 0
chr16:2599762|2599875 hsa-miR-1268b 1 0 0
chr16:2599762|2599875 hsa-miR-3135b 1 0 0
chr16:2599762|2599875 hsa-miR-4466 1 0 0
chr16:2599762|2599875 hsa-miR-4492 1 0 0
chr16:2599762|2599875 hsa-miR-4505 1 1 0
chr16:2599762|2599875 hsa-miR-4507 1 0 0
chr16:2599762|2599875 hsa-miR-4516 1 0 0
chr16:2599762|2599875 hsa-miR-1587 1 0 0
chr16:2599762|2599875 hsa-miR-4656 1 0 0
chr16:2599762|2599875 hsa-miR-4669 1 0 0
chr16:2599762|2599875 hsa-miR-4688 1 0 0
chr16:2599762|2599875 hsa-miR-4706 1 0 0
chr16:2599762|2599875 hsa-miR-4741 1 0 0
chr16:2599762|2599875 hsa-miR-5090 1 0 0
chr16:2599762|2599875 hsa-miR-5100 0 1 0
chr16:2599762|2599875 hsa-miR-5787 1 1 0
chr16:2599762|2599875 hsa-miR-6081 1 0 0
chr16:2599762|2599875 hsa-miR-6132 1 0 0
chr16:2599762|2599875 hsa-miR-8082 1 0 0
chr16:2599762|2599875 hsa-miR-12115 1 1 0
chr16:2599762|2599875 hsa-miR-12117 1 1 0
chr16:2599762|2599875 hsa-miR-211-3p 1 0 0
chr16:2599762|2599875 hsa-miR-135a-3p 1 0 0
chr16:2599762|2599875 hsa-miR-4433b-3p 1 0 0
chr16:2599762|2599875 hsa-miR-668-3p 1 0 0
chr16:2599762|2599875 hsa-miR-3150a-3p 0 1 0
chr16:2599762|2599875 hsa-miR-4687-3p 1 0 0
chr16:2599762|2599875 hsa-miR-6799-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6804-5p 1 0 0
chr16:2599762|2599875 hsa-miR-3663-3p 1 0 0
chr16:2599762|2599875 hsa-miR-6880-5p 1 0 0
chr16:2599762|2599875 hsa-miR-7847-3p 1 0 0
chr16:2599762|2599875 hsa-miR-6890-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6727-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6721-5p 1 0 0
chr16:2599762|2599875 hsa-miR-5589-5p 1 0 0
chr16:2599762|2599875 hsa-miR-491-5p 0 1 0
chr16:2599762|2599875 hsa-miR-3151-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6829-5p 1 1 0
chr16:2599762|2599875 hsa-miR-6760-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6786-5p 1 0 0
chr16:2599762|2599875 hsa-miR-3186-5p 1 0 0
chr16:2599762|2599875 hsa-miR-4693-3p 0 1 0
chr16:2599762|2599875 hsa-miR-4640-5p 1 0 0
chr16:2599762|2599875 hsa-miR-3127-5p 1 1 0
chr16:2599762|2599875 hsa-miR-4690-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6823-5p 1 0 0
chr16:2599762|2599875 hsa-miR-4732-5p 1 0 0
chr16:2599762|2599875 hsa-miR-149-3p 1 0 0
chr16:2599762|2599875 hsa-miR-6824-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6789-5p 1 0 0
chr16:2599762|2599875 hsa-miR-3162-5p 1 0 0
chr16:2599762|2599875 hsa-miR-4776-5p 1 0 0
chr16:2599762|2599875 hsa-miR-3191-3p 1 0 0
chr16:2599762|2599875 hsa-miR-4638-5p 0 1 0
chr16:2599762|2599875 hsa-miR-1207-5p 1 0 0
chr16:2599762|2599875 hsa-miR-4763-3p 1 0 0
chr16:2599762|2599875 hsa-miR-6775-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6743-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6754-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6722-3p 1 0 0
chr16:2599762|2599875 hsa-miR-6797-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6808-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6879-5p 1 0 0
chr16:2599762|2599875 hsa-miR-1915-3p 1 0 0
chr16:2599762|2599875 hsa-miR-3620-5p 1 0 0
chr16:2599762|2599875 hsa-miR-5196-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6780b-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6836-5p 1 0 0
chr16:2599762|2599875 hsa-miR-10396b-5p 1 0 0
chr16:2599762|2599875 hsa-miR-1909-3p 1 0 0
chr16:2599762|2599875 hsa-miR-328-5p 1 0 0
chr16:2599762|2599875 hsa-miR-4632-5p 1 0 0
chr16:2599762|2599875 hsa-miR-4749-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6729-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6777-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6795-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6889-5p 1 0 0
chr16:2599762|2599875 hsa-miR-3940-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6849-5p 1 0 0
chr16:2599762|2599875 hsa-miR-10398-5p 1 0 0
chr16:2599762|2599875 hsa-miR-6822-5p 1 0 0
chr16:2599762|2599875 hsa-miR-769-3p 1 0 0
chr16:2599762|2599875 hsa-miR-330-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:2599762|2599875
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MVIGKQVEQGRGFNWSTRLGCLGRLFR
Nucleotide Sequence CTGGTTATAGGGAAACAAGTGGAGCAGGGACGTGGCTTTAATTGGAGCACTCGGCTGGGCTGCTTGGGGAGACTCTTCCGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab