CircRNA Information

General Information
circRNA Basic Information
CircID chr16:27364402|27364685
Strand +
CircType exon
Host Gene ENSG00000077238.12;
Algorism CIRI2;
Sequence ACACAGACGAGCATTACTCAACCCAAGGTTCCCGCCTTCCCTAGCACCTGAGGTCTGGGCCAACATGCAGGGTAACTGGTGCCTTATGCCTGCTGTCTGGATTGCCCGGCCCACAGGGTGGCTGAGCATATTTATTCTGGGGGTTCCATGCATACGAGGAGCCCCCAGCCATACAGCTGGGCATGGGTGTTTGGCAGCAAATTGTCCCTGCTTTAGTCATAGCAATTTTTCATGTCCTCTGTTGCTCCCCTTAACTGAACACCCCTTGACAGCCGGGATTCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:27364402|27364685 hsa-miR-10a-5p 0 0 1
chr16:27364402|27364685 hsa-miR-10a-3p 0 0 1
chr16:27364402|27364685 hsa-miR-10b-5p 0 0 1
chr16:27364402|27364685 hsa-miR-10b-3p 0 0 1
chr16:27364402|27364685 hsa-miR-214-5p 0 0 1
chr16:27364402|27364685 hsa-miR-214-3p 0 0 1
chr16:27364402|27364685 hsa-miR-155-5p 0 0 1
chr16:27364402|27364685 hsa-miR-155-3p 0 0 1
chr16:27364402|27364685 hsa-miR-328-5p 0 0 1
chr16:27364402|27364685 hsa-miR-328-3p 0 0 1
chr16:27364402|27364685 hsa-miR-135b-5p 0 0 1
chr16:27364402|27364685 hsa-miR-135b-3p 0 0 1
chr16:27364402|27364685 hsa-miR-506-5p 0 0 1
chr16:27364402|27364685 hsa-miR-506-3p 0 0 1
chr16:27364402|27364685 hsa-miR-586 0 0 1
chr16:27364402|27364685 hsa-miR-609 0 0 1
chr16:27364402|27364685 hsa-miR-637 0 1 1
chr16:27364402|27364685 hsa-miR-935 0 0 1
chr16:27364402|27364685 hsa-miR-939-5p 0 0 1
chr16:27364402|27364685 hsa-miR-939-3p 0 0 1
chr16:27364402|27364685 hsa-miR-302f 0 0 1
chr16:27364402|27364685 hsa-miR-1324 0 1 1
chr16:27364402|27364685 hsa-miR-125a-3p 1 0 1
chr16:27364402|27364685 hsa-miR-361-3p 0 1 1
chr16:27364402|27364685 hsa-miR-124 0 0 1
chr16:27364402|27364685 hsa-miR-135a 0 0 1
chr16:27364402|27364685 hsa-miR-608 1 0 0
chr16:27364402|27364685 hsa-miR-663a 1 0 0
chr16:27364402|27364685 hsa-miR-920 1 0 0
chr16:27364402|27364685 hsa-miR-3175 1 0 0
chr16:27364402|27364685 hsa-miR-3196 1 0 0
chr16:27364402|27364685 hsa-miR-4268 0 1 0
chr16:27364402|27364685 hsa-miR-3665 1 0 0
chr16:27364402|27364685 hsa-miR-3714 1 0 0
chr16:27364402|27364685 hsa-miR-3936 1 1 0
chr16:27364402|27364685 hsa-miR-4507 0 1 0
chr16:27364402|27364685 hsa-miR-4651 1 0 0
chr16:27364402|27364685 hsa-miR-4688 1 1 0
chr16:27364402|27364685 hsa-miR-4706 1 0 0
chr16:27364402|27364685 hsa-miR-4739 1 0 0
chr16:27364402|27364685 hsa-miR-4741 1 0 0
chr16:27364402|27364685 hsa-miR-5698 1 0 0
chr16:27364402|27364685 hsa-miR-5787 1 0 0
chr16:27364402|27364685 hsa-miR-6075 1 0 0
chr16:27364402|27364685 hsa-miR-6081 1 0 0
chr16:27364402|27364685 hsa-miR-6085 1 0 0
chr16:27364402|27364685 hsa-miR-6090 1 0 0
chr16:27364402|27364685 hsa-miR-7974 1 0 0
chr16:27364402|27364685 hsa-miR-8089 1 0 0
chr16:27364402|27364685 hsa-miR-9500 0 1 0
chr16:27364402|27364685 hsa-miR-134-3p 0 1 0
chr16:27364402|27364685 hsa-miR-150-3p 1 0 0
chr16:27364402|27364685 hsa-miR-6734-5p 1 0 0
chr16:27364402|27364685 hsa-miR-4731-5p 0 1 0
chr16:27364402|27364685 hsa-miR-3157-5p 0 1 0
chr16:27364402|27364685 hsa-miR-6747-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6765-5p 1 0 0
chr16:27364402|27364685 hsa-miR-7106-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6825-5p 1 0 0
chr16:27364402|27364685 hsa-miR-4687-3p 1 0 0
chr16:27364402|27364685 hsa-miR-25-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6089 1 0 0
chr16:27364402|27364685 hsa-miR-3064-5p 0 1 0
chr16:27364402|27364685 hsa-miR-7154-3p 1 0 0
chr16:27364402|27364685 hsa-miR-593-5p 1 1 0
chr16:27364402|27364685 hsa-miR-6842-3p 0 1 0
chr16:27364402|27364685 hsa-miR-6806-5p 1 1 0
chr16:27364402|27364685 hsa-miR-3151-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6772-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6827-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6798-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6782-5p 1 1 0
chr16:27364402|27364685 hsa-miR-6821-5p 1 0 0
chr16:27364402|27364685 hsa-miR-1226-5p 1 0 0
chr16:27364402|27364685 hsa-miR-2277-3p 1 0 0
chr16:27364402|27364685 hsa-miR-1908-5p 1 0 0
chr16:27364402|27364685 hsa-miR-1228-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6771-5p 1 0 0
chr16:27364402|27364685 hsa-miR-877-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6847-5p 1 1 0
chr16:27364402|27364685 hsa-miR-149-3p 1 0 0
chr16:27364402|27364685 hsa-miR-6824-5p 1 0 0
chr16:27364402|27364685 hsa-miR-3162-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6802-5p 1 0 0
chr16:27364402|27364685 hsa-miR-146b-3p 0 1 0
chr16:27364402|27364685 hsa-miR-3189-3p 0 1 0
chr16:27364402|27364685 hsa-miR-1180-3p 1 0 0
chr16:27364402|27364685 hsa-miR-4763-3p 1 0 0
chr16:27364402|27364685 hsa-miR-6787-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6870-5p 1 0 0
chr16:27364402|27364685 hsa-miR-1343-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6726-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6743-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6752-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6803-5p 1 0 0
chr16:27364402|27364685 hsa-miR-7110-5p 1 0 0
chr16:27364402|27364685 hsa-miR-7111-5p 1 0 0
chr16:27364402|27364685 hsa-miR-5196-5p 1 1 0
chr16:27364402|27364685 hsa-miR-6780b-5p 1 0 0
chr16:27364402|27364685 hsa-miR-1909-3p 1 0 0
chr16:27364402|27364685 hsa-miR-4632-5p 1 0 0
chr16:27364402|27364685 hsa-miR-4685-5p 1 0 0
chr16:27364402|27364685 hsa-miR-4725-3p 1 0 0
chr16:27364402|27364685 hsa-miR-4726-5p 1 0 0
chr16:27364402|27364685 hsa-miR-4749-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6738-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6794-5p 1 0 0
chr16:27364402|27364685 hsa-miR-4697-5p 1 0 0
chr16:27364402|27364685 hsa-miR-4723-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6885-5p 1 1 0
chr16:27364402|27364685 hsa-miR-3940-5p 1 1 0
chr16:27364402|27364685 hsa-miR-6856-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6799-3p 1 1 0
chr16:27364402|27364685 hsa-miR-3679-5p 1 0 0
chr16:27364402|27364685 hsa-miR-4747-5p 0 1 0
chr16:27364402|27364685 hsa-miR-4716-3p 1 0 0
chr16:27364402|27364685 hsa-miR-541-3p 1 0 0
chr16:27364402|27364685 hsa-miR-6785-5p 1 1 0
chr16:27364402|27364685 hsa-miR-5591-5p 1 0 0
chr16:27364402|27364685 hsa-miR-6859-5p 1 0 0
chr16:27364402|27364685 hsa-miR-3619-5p 1 1 0
chr16:27364402|27364685 hsa-miR-7155-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:27364402|27364685
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MVPYACCLDCPAHRVAEHIYSGGSMHTRSPQPYSWAWVFGSKLSLL
Nucleotide Sequence CTGGTGCCTTATGCCTGCTGTCTGGATTGCCCGGCCCACAGGGTGGCTGAGCATATTTATTCTGGGGGTTCCATGCATACGAGGAGCCCCCAGCCATACAGCTGGGCATGGGTGTTTGGCAGCAAATTGTCCCTGCTTTAG
CircID chr16:27364402|27364685
ORF Type ORF2
Protein Length 73
Nucleotide Length 219
Protein Sequence MQGNWCLMPAVWIARPTGWLSIFILGVPCIRGAPSHTAGHGCLAANCPCFSHSNFSCPLLLPLTEHPLTAGIL
Nucleotide Sequence ATGCAGGGTAACTGGTGCCTTATGCCTGCTGTCTGGATTGCCCGGCCCACAGGGTGGCTGAGCATATTTATTCTGGGGGTTCCATGCATACGAGGAGCCCCCAGCCATACAGCTGGGCATGGGTGTTTGGCAGCAAATTGTCCCTGCTTTAGTCATAGCAATTTTTCATGTCCTCTGTTGCTCCCCTTAACTGAACACCCCTTGACAGCCGGGATTCTG
CircID chr16:27364402|27364685
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MRSGPTCRVTGALCLLSGLPGPQGG
Nucleotide Sequence CTGAGGTCTGGGCCAACATGCAGGGTAACTGGTGCCTTATGCCTGCTGTCTGGATTGCCCGGCCCACAGGGTGGCTGA
CircID chr16:27364402|27364685
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MGMGVWQQIVPALVIAIFHVLCCSP
Nucleotide Sequence CTGGGCATGGGTGTTTGGCAGCAAATTGTCCCTGCTTTAGTCATAGCAATTTTTCATGTCCTCTGTTGCTCCCCTTAA
CircID chr16:27364402|27364685
ORF Type ORF5
Protein Length 59
Nucleotide Length 180
Protein Sequence MTKAGTICCQTPMPSCMAGGSSYAWNPQNKYAQPPCGPGNPDSRHKAPVTLHVGPDLRC
Nucleotide Sequence ATGACTAAAGCAGGGACAATTTGCTGCCAAACACCCATGCCCAGCTGTATGGCTGGGGGCTCCTCGTATGCATGGAACCCCCAGAATAAATATGCTCAGCCACCCTGTGGGCCGGGCAATCCAGACAGCAGGCATAAGGCACCAGTTACCCTGCATGTTGGCCCAGACCTCAGGTGCTAG
CircID chr16:27364402|27364685
ORF Type ORF6
Protein Length 56
Nucleotide Length 168
Protein Sequence MGAPRMHGTPRINMLSHPVGRAIQTAGIRHQLPCMLAQTSGAREGGNLGLSNARLC
Nucleotide Sequence CTGGGGGCTCCTCGTATGCATGGAACCCCCAGAATAAATATGCTCAGCCACCCTGTGGGCCGGGCAATCCAGACAGCAGGCATAAGGCACCAGTTACCCTGCATGTTGGCCCAGACCTCAGGTGCTAGGGAAGGCGGGAACCTTGGGTTGAGTAATGCTCGTCTGTGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab