CircRNA Information

General Information
circRNA Basic Information
CircID chr16:27471757|27471918
Strand +
CircType exon
Host Gene ENSG00000077235.16;
Algorism CIRI2;
Sequence TTTCCGCCTCTATCGGGAGTACAAGGACCACGTTCTTGTGAAGGCCTTCATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCTCCCCTTCGTGCCAATGTCCTACCAGCTATCCCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:27471757|27471918 hsa-miR-96-5p 0 0 1
chr16:27471757|27471918 hsa-miR-96-3p 0 0 1
chr16:27471757|27471918 hsa-miR-563 0 0 1
chr16:27471757|27471918 hsa-miR-564 0 0 1
chr16:27471757|27471918 hsa-miR-635 0 0 1
chr16:27471757|27471918 hsa-miR-1271-5p 0 0 1
chr16:27471757|27471918 hsa-miR-1271-3p 0 0 1
chr16:27471757|27471918 hsa-miR-513b-5p 0 0 1
chr16:27471757|27471918 hsa-miR-513b-3p 0 0 1
chr16:27471757|27471918 hsa-miR-1197 0 0 1
chr16:27471757|27471918 hsa-miR-941 0 0 1
chr16:27471757|27471918 hsa-miR-671-3p 0 1 1
chr16:27471757|27471918 hsa-miR-637 1 0 0
chr16:27471757|27471918 hsa-miR-638 1 0 0
chr16:27471757|27471918 hsa-miR-762 1 0 0
chr16:27471757|27471918 hsa-miR-1469 1 0 0
chr16:27471757|27471918 hsa-miR-3153 1 0 0
chr16:27471757|27471918 hsa-miR-3181 1 0 0
chr16:27471757|27471918 hsa-miR-4298 1 0 0
chr16:27471757|27471918 hsa-miR-4260 0 1 0
chr16:27471757|27471918 hsa-miR-4268 0 1 0
chr16:27471757|27471918 hsa-miR-4462 1 0 0
chr16:27471757|27471918 hsa-miR-4488 1 0 0
chr16:27471757|27471918 hsa-miR-4493 0 1 0
chr16:27471757|27471918 hsa-miR-4634 1 0 0
chr16:27471757|27471918 hsa-miR-4651 1 0 0
chr16:27471757|27471918 hsa-miR-12128 1 0 0
chr16:27471757|27471918 hsa-miR-6728-5p 1 0 0
chr16:27471757|27471918 hsa-miR-1227-5p 1 1 0
chr16:27471757|27471918 hsa-miR-877-3p 0 1 0
chr16:27471757|27471918 hsa-miR-6798-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6782-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6821-5p 1 0 0
chr16:27471757|27471918 hsa-miR-1343-3p 1 0 0
chr16:27471757|27471918 hsa-miR-615-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6852-5p 1 0 0
chr16:27471757|27471918 hsa-miR-204-3p 1 0 0
chr16:27471757|27471918 hsa-miR-1229-5p 1 0 0
chr16:27471757|27471918 hsa-miR-4446-3p 1 0 0
chr16:27471757|27471918 hsa-miR-149-3p 1 1 0
chr16:27471757|27471918 hsa-miR-6824-5p 1 0 0
chr16:27471757|27471918 hsa-miR-4707-5p 1 0 0
chr16:27471757|27471918 hsa-miR-597-3p 1 0 0
chr16:27471757|27471918 hsa-miR-4283 0 1 0
chr16:27471757|27471918 hsa-miR-1207-5p 1 0 0
chr16:27471757|27471918 hsa-miR-1233-5p 1 0 0
chr16:27471757|27471918 hsa-miR-1343-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6743-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6756-5p 1 0 0
chr16:27471757|27471918 hsa-miR-10401-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6779-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6797-5p 1 0 0
chr16:27471757|27471918 hsa-miR-3620-5p 1 0 0
chr16:27471757|27471918 hsa-miR-4728-5p 1 0 0
chr16:27471757|27471918 hsa-miR-328-5p 1 0 0
chr16:27471757|27471918 hsa-miR-4745-3p 0 1 0
chr16:27471757|27471918 hsa-miR-6729-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6883-5p 0 1 0
chr16:27471757|27471918 hsa-miR-939-5p 1 0 0
chr16:27471757|27471918 hsa-miR-3679-5p 1 0 0
chr16:27471757|27471918 hsa-miR-4646-5p 1 0 0
chr16:27471757|27471918 hsa-miR-6785-5p 1 1 0
chr16:27471757|27471918 hsa-miR-6724-5p 1 0 0
chr16:27471757|27471918 hsa-miR-10400-3p 1 0 0
chr16:27471757|27471918 hsa-miR-320a-3p 1 0 0
chr16:27471757|27471918 hsa-miR-320b 1 0 0
chr16:27471757|27471918 hsa-miR-619-5p 1 0 0
chr16:27471757|27471918 hsa-miR-380-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:27471757|27471918
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MECQKRSLVNRRRVNHTLGPKKNRALPFVPMSYQLSQ
Nucleotide Sequence ATGGAGTGCCAGAAGAGGAGCTTGGTCAACCGGCGCCGGGTCAACCACACGCTGGGCCCCAAGAAGAACCGGGCCCTCCCCTTCGTGCCAATGTCCTACCAGCTATCCCAG

CircID chr16:27471757|27471918
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MGPSVWLTRRRLTKLLFWHSMKAFTRTWSLYSR
Nucleotide Sequence TTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAG

CircID chr16:27471757|27471918
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MVGHWHEGEGPVLLGAQRVVDPAPVDQAPLLALHEGLHKNVVLVLPIEAE
Nucleotide Sequence CTGGTAGGACATTGGCACGAAGGGGAGGGCCCGGTTCTTCTTGGGGCCCAGCGTGTGGTTGACCCGGCGCCGGTTGACCAAGCTCCTCTTCTGGCACTCCATGAAGGCCTTCACAAGAACGTGGTCCTTGTACTCCCGATAGAGGCGGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites