CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2763662|2763844
Strand -
CircType exon
Host Gene ENSG00000167978.15;
Algorism CIRI2;
Sequence CAGGCGAGAGCTATTTTGGTGTCTCATCTCTGCAACTGAAAGGACAATCTCAAACTTCACCAGACCACAGATCTGATACTTCAAGTCCAGAAGTGAGACAGAGTCATTCAGAATCACCATCTCTGCAGAGCAAATCTCAAACATCACCTAAGGGAGGTCGGTCCAGGTCTTCATCTCCAGTCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2763662|2763844 hsa-miR-143-5p 0 0 1
chr16:2763662|2763844 hsa-miR-143-3p 0 0 1
chr16:2763662|2763844 hsa-miR-422a 0 1 1
chr16:2763662|2763844 hsa-miR-573 0 0 1
chr16:2763662|2763844 hsa-miR-619-5p 0 0 1
chr16:2763662|2763844 hsa-miR-619-3p 0 0 1
chr16:2763662|2763844 hsa-miR-620 0 0 1
chr16:2763662|2763844 hsa-miR-631 1 1 1
chr16:2763662|2763844 hsa-miR-1205 0 0 1
chr16:2763662|2763844 hsa-miR-1299 0 0 1
chr16:2763662|2763844 hsa-miR-1270 0 1 1
chr16:2763662|2763844 hsa-miR-361-5p 0 0 1
chr16:2763662|2763844 hsa-miR-1184 0 0 1
chr16:2763662|2763844 hsa-miR-378 0 0 1
chr16:2763662|2763844 hsa-miR-516b 0 0 1
chr16:2763662|2763844 hsa-miR-219-5p 0 0 1
chr16:2763662|2763844 hsa-miR-378b 1 1 0
chr16:2763662|2763844 hsa-miR-378c 1 1 0
chr16:2763662|2763844 hsa-miR-4292 1 0 0
chr16:2763662|2763844 hsa-miR-378e 1 1 0
chr16:2763662|2763844 hsa-miR-378f 0 1 0
chr16:2763662|2763844 hsa-miR-378g 1 1 0
chr16:2763662|2763844 hsa-miR-4450 1 0 0
chr16:2763662|2763844 hsa-miR-378h 1 1 0
chr16:2763662|2763844 hsa-miR-378i 0 1 0
chr16:2763662|2763844 hsa-miR-4748 1 0 0
chr16:2763662|2763844 hsa-miR-6088 0 1 0
chr16:2763662|2763844 hsa-miR-8057 1 0 0
chr16:2763662|2763844 hsa-miR-8089 1 0 0
chr16:2763662|2763844 hsa-miR-11399 1 0 0
chr16:2763662|2763844 hsa-miR-4747-3p 1 0 0
chr16:2763662|2763844 hsa-miR-3194-3p 1 0 0
chr16:2763662|2763844 hsa-miR-5187-5p 0 1 0
chr16:2763662|2763844 hsa-miR-6757-5p 0 1 0
chr16:2763662|2763844 hsa-miR-939-3p 1 0 0
chr16:2763662|2763844 hsa-miR-6740-5p 1 0 0
chr16:2763662|2763844 hsa-miR-3127-5p 1 0 0
chr16:2763662|2763844 hsa-miR-4756-3p 0 1 0
chr16:2763662|2763844 hsa-miR-6717-5p 1 0 0
chr16:2763662|2763844 hsa-miR-3158-5p 0 1 0
chr16:2763662|2763844 hsa-miR-4740-5p 1 0 0
chr16:2763662|2763844 hsa-miR-2355-3p 0 1 0
chr16:2763662|2763844 hsa-miR-4632-3p 1 0 0
chr16:2763662|2763844 hsa-miR-29c-5p 1 1 0
chr16:2763662|2763844 hsa-miR-3664-5p 0 1 0
chr16:2763662|2763844 hsa-miR-6851-5p 1 0 0
chr16:2763662|2763844 hsa-miR-4701-3p 1 0 0
chr16:2763662|2763844 hsa-miR-4700-5p 1 1 0
chr16:2763662|2763844 hsa-miR-378a-3p 1 1 0
chr16:2763662|2763844 hsa-miR-5009-5p 0 1 0
chr16:2763662|2763844 hsa-miR-6783-3p 1 0 0
chr16:2763662|2763844 hsa-miR-378d 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:2763662|2763844
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MQLKGQSQTSPDHRSDTSSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPV
Nucleotide Sequence CTGCAACTGAAAGGACAATCTCAAACTTCACCAGACCACAGATCTGATACTTCAAGTCCAGAAGTGAGACAGAGTCATTCAGAATCACCATCTCTGCAGAGCAAATCTCAAACATCACCTAAGGGAGGTCGGTCCAGGTCTTCATCTCCAGTC

CircID chr16:2763662|2763844
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MFEICSAEMVILNDSVSLLDLKYQICGLVKFEIVLSVAEMRHQNSSRL
Nucleotide Sequence ATGTTTGAGATTTGCTCTGCAGAGATGGTGATTCTGAATGACTCTGTCTCACTTCTGGACTTGAAGTATCAGATCTGTGGTCTGGTGAAGTTTGAGATTGTCCTTTCAGTTGCAGAGATGAGACACCAAAATAGCTCTCGCCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites