CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2768432|2768599
Strand +
CircType exon
Host Gene ENSG00000167978.15;
Algorism CIRI2;
Sequence CTCTGAAGATCCTTCCAGCCCAGGGAGTTCCTCTTGAGGTCTAACTGCCATCCCTCCTGCTGTAAAATTAAGTCCATTTCCTCTAGTTCTGTCCTCTGTAGAGACGGAAAACTTATCATTATCCTCTAGAGAATGAACCTTCGGAGACTTTTATCTGTCCCATTCCTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2768432|2768599 hsa-miR-34a-5p 0 0 1
chr16:2768432|2768599 hsa-miR-34a-3p 0 0 1
chr16:2768432|2768599 hsa-miR-214-5p 0 0 1
chr16:2768432|2768599 hsa-miR-214-3p 0 0 1
chr16:2768432|2768599 hsa-miR-335-5p 0 0 1
chr16:2768432|2768599 hsa-miR-335-3p 0 0 1
chr16:2768432|2768599 hsa-miR-449a 0 0 1
chr16:2768432|2768599 hsa-miR-577 0 0 1
chr16:2768432|2768599 hsa-miR-449b-5p 0 0 1
chr16:2768432|2768599 hsa-miR-449b-3p 0 0 1
chr16:2768432|2768599 hsa-miR-1298-5p 0 0 1
chr16:2768432|2768599 hsa-miR-1298-3p 0 0 1
chr16:2768432|2768599 hsa-miR-877-5p 0 0 1
chr16:2768432|2768599 hsa-miR-877-3p 0 0 1
chr16:2768432|2768599 hsa-miR-1251-5p 0 0 1
chr16:2768432|2768599 hsa-miR-1251-3p 0 0 1
chr16:2768432|2768599 hsa-miR-548n 0 0 1
chr16:2768432|2768599 hsa-miR-139-5p 0 0 1
chr16:2768432|2768599 hsa-miR-518d-5p 0 1 1
chr16:2768432|2768599 hsa-miR-519b-5p 0 1 1
chr16:2768432|2768599 hsa-miR-519c-5p 0 1 1
chr16:2768432|2768599 hsa-miR-520c-5p 0 1 1
chr16:2768432|2768599 hsa-miR-1302 0 0 1
chr16:2768432|2768599 hsa-miR-34c-5p 0 0 1
chr16:2768432|2768599 hsa-miR-590-3p 0 0 1
chr16:2768432|2768599 hsa-miR-526a 0 0 1
chr16:2768432|2768599 hsa-miR-1185 0 0 1
chr16:2768432|2768599 hsa-miR-608 1 0 0
chr16:2768432|2768599 hsa-miR-1183 1 0 0
chr16:2768432|2768599 hsa-miR-3125 0 1 0
chr16:2768432|2768599 hsa-miR-3196 1 0 0
chr16:2768432|2768599 hsa-miR-4298 1 1 0
chr16:2768432|2768599 hsa-miR-4292 0 1 0
chr16:2768432|2768599 hsa-miR-378g 0 1 0
chr16:2768432|2768599 hsa-miR-4498 0 1 0
chr16:2768432|2768599 hsa-miR-4530 1 0 0
chr16:2768432|2768599 hsa-miR-1587 1 1 0
chr16:2768432|2768599 hsa-miR-4739 1 0 0
chr16:2768432|2768599 hsa-miR-4779 0 1 0
chr16:2768432|2768599 hsa-miR-5090 1 0 0
chr16:2768432|2768599 hsa-miR-5093 1 0 0
chr16:2768432|2768599 hsa-miR-5683 0 1 0
chr16:2768432|2768599 hsa-miR-6127 1 0 0
chr16:2768432|2768599 hsa-miR-6165 1 1 0
chr16:2768432|2768599 hsa-miR-7106-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6510-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6728-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6757-5p 0 1 0
chr16:2768432|2768599 hsa-miR-4722-5p 1 1 0
chr16:2768432|2768599 hsa-miR-3928-3p 0 1 0
chr16:2768432|2768599 hsa-miR-7845-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6798-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6782-5p 1 0 0
chr16:2768432|2768599 hsa-miR-4690-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6847-5p 0 1 0
chr16:2768432|2768599 hsa-miR-4446-3p 1 0 0
chr16:2768432|2768599 hsa-miR-149-3p 1 0 0
chr16:2768432|2768599 hsa-miR-6824-5p 1 0 0
chr16:2768432|2768599 hsa-miR-5010-5p 1 0 0
chr16:2768432|2768599 hsa-miR-5004-5p 0 1 0
chr16:2768432|2768599 hsa-miR-520g-5p 0 1 0
chr16:2768432|2768599 hsa-miR-1207-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6865-5p 1 0 0
chr16:2768432|2768599 hsa-miR-5001-5p 0 1 0
chr16:2768432|2768599 hsa-miR-6737-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6819-5p 1 0 0
chr16:2768432|2768599 hsa-miR-1249-5p 1 1 0
chr16:2768432|2768599 hsa-miR-6722-3p 1 0 0
chr16:2768432|2768599 hsa-miR-6774-5p 1 1 0
chr16:2768432|2768599 hsa-miR-6797-5p 1 1 0
chr16:2768432|2768599 hsa-miR-6879-5p 1 0 0
chr16:2768432|2768599 hsa-miR-3620-5p 0 1 0
chr16:2768432|2768599 hsa-miR-5196-5p 1 0 0
chr16:2768432|2768599 hsa-miR-328-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6883-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6887-5p 1 0 0
chr16:2768432|2768599 hsa-miR-4436b-3p 1 0 0
chr16:2768432|2768599 hsa-miR-1914-3p 1 0 0
chr16:2768432|2768599 hsa-miR-3679-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6766-5p 1 0 0
chr16:2768432|2768599 hsa-miR-6791-5p 1 1 0
chr16:2768432|2768599 hsa-miR-518e-5p 0 1 0
chr16:2768432|2768599 hsa-miR-518f-5p 0 1 0
chr16:2768432|2768599 hsa-miR-519a-5p 0 1 0
chr16:2768432|2768599 hsa-miR-522-5p 0 1 0
chr16:2768432|2768599 hsa-miR-523-5p 0 1 0
chr16:2768432|2768599 hsa-miR-526a-5p 0 1 0
chr16:2768432|2768599 hsa-miR-5009-5p 0 1 0
chr16:2768432|2768599 hsa-miR-6859-5p 1 1 0
chr16:2768432|2768599 hsa-miR-3619-5p 1 1 0
chr16:2768432|2768599 hsa-miR-6838-5p 1 0 0
chr16:2768432|2768599 hsa-miR-519a-2-5p 0 1 0
chr16:2768432|2768599 hsa-miR-520b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:2768432|2768599
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MRSNCHPSCCKIKSISSSSVLCRDGKLIIIL
Nucleotide Sequence TTGAGGTCTAACTGCCATCCCTCCTGCTGTAAAATTAAGTCCATTTCCTCTAGTTCTGTCCTCTGTAGAGACGGAAAACTTATCATTATCCTCTAG
CircID chr16:2768432|2768599
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MISFPSLQRTELEEMDLILQQEGWQLDLKRNSLGWKDLQ
Nucleotide Sequence ATGATAAGTTTTCCGTCTCTACAGAGGACAGAACTAGAGGAAATGGACTTAATTTTACAGCAGGAGGGATGGCAGTTAGACCTCAAGAGGAACTCCCTGGGCTGGAAGGATCTTCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab