CircRNA Information

General Information
circRNA Basic Information
CircID chr16:2777763|2778083
Strand +
CircType exon
Host Gene ENSG00000276791.1;
Algorism CIRI2;
Sequence CCTCTGGCTCATCTCTCCAACGCCGCCTCCGACACCCGCCCAGCACGACCCAGCCTGGGGTGTCTCTGCAAGGGAGAGGTCAAGTGGGGGGCCCTCACTCTCATGTAAATGTAACTTGGGGCGATGCAGGATAGTGTCCAGCATTCAGGAAACAGGGCCTTGGTGGAAAGAGCGGCCAGCCAGGAGAATCAAGTCTCTAGGCCTTTTCAGAGCCGAAATGCAGCCAAGCAGGAAGGCGGACAGGCGCCCAGGGCTCCTGGGGCAAGGAGCTGCCCCTTCCCTCCTCCTGCGAAGAGCGGTCGCCAACCGCTCCCGTGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:2777763|2778083 hsa-miR-192-5p 0 0 1
chr16:2777763|2778083 hsa-miR-192-3p 0 0 1
chr16:2777763|2778083 hsa-miR-215-5p 0 0 1
chr16:2777763|2778083 hsa-miR-215-3p 0 0 1
chr16:2777763|2778083 hsa-miR-143-5p 0 0 1
chr16:2777763|2778083 hsa-miR-143-3p 0 0 1
chr16:2777763|2778083 hsa-miR-185-5p 0 0 1
chr16:2777763|2778083 hsa-miR-185-3p 0 0 1
chr16:2777763|2778083 hsa-miR-370-5p 0 0 1
chr16:2777763|2778083 hsa-miR-370-3p 0 0 1
chr16:2777763|2778083 hsa-miR-564 0 0 1
chr16:2777763|2778083 hsa-miR-604 0 0 1
chr16:2777763|2778083 hsa-miR-620 0 0 1
chr16:2777763|2778083 hsa-miR-623 1 1 1
chr16:2777763|2778083 hsa-miR-647 0 0 1
chr16:2777763|2778083 hsa-miR-765 0 1 1
chr16:2777763|2778083 hsa-miR-665 0 1 1
chr16:2777763|2778083 hsa-miR-760 0 0 1
chr16:2777763|2778083 hsa-miR-1200 0 0 1
chr16:2777763|2778083 hsa-miR-1287-5p 0 0 1
chr16:2777763|2778083 hsa-miR-1287-3p 0 0 1
chr16:2777763|2778083 hsa-miR-1291 0 0 1
chr16:2777763|2778083 hsa-miR-1270 0 0 1
chr16:2777763|2778083 hsa-miR-296-5p 0 1 1
chr16:2777763|2778083 hsa-miR-486-3p 0 1 1
chr16:2777763|2778083 hsa-miR-146b-3p 0 0 1
chr16:2777763|2778083 hsa-miR-566 0 0 1
chr16:2777763|2778083 hsa-miR-502-5p 0 1 1
chr16:2777763|2778083 hsa-miR-1233 0 0 1
chr16:2777763|2778083 hsa-miR-886-5p 0 0 1
chr16:2777763|2778083 hsa-miR-1274b 0 0 1
chr16:2777763|2778083 hsa-miR-1273 0 0 1
chr16:2777763|2778083 hsa-miR-886-3p 0 0 1
chr16:2777763|2778083 hsa-miR-762 1 0 0
chr16:2777763|2778083 hsa-miR-3141 1 0 0
chr16:2777763|2778083 hsa-miR-3147 1 0 0
chr16:2777763|2778083 hsa-miR-3196 1 0 0
chr16:2777763|2778083 hsa-miR-4297 0 1 0
chr16:2777763|2778083 hsa-miR-4306 0 1 0
chr16:2777763|2778083 hsa-miR-4287 0 1 0
chr16:2777763|2778083 hsa-miR-4292 0 1 0
chr16:2777763|2778083 hsa-miR-4448 0 1 0
chr16:2777763|2778083 hsa-miR-4467 0 1 0
chr16:2777763|2778083 hsa-miR-4486 0 1 0
chr16:2777763|2778083 hsa-miR-4505 1 0 0
chr16:2777763|2778083 hsa-miR-4507 1 1 0
chr16:2777763|2778083 hsa-miR-1587 1 0 0
chr16:2777763|2778083 hsa-miR-3960 1 0 0
chr16:2777763|2778083 hsa-miR-4651 1 0 0
chr16:2777763|2778083 hsa-miR-4688 0 1 0
chr16:2777763|2778083 hsa-miR-4739 1 0 0
chr16:2777763|2778083 hsa-miR-4767 1 0 0
chr16:2777763|2778083 hsa-miR-4779 0 1 0
chr16:2777763|2778083 hsa-miR-5787 1 1 0
chr16:2777763|2778083 hsa-miR-6088 0 1 0
chr16:2777763|2778083 hsa-miR-6090 1 1 0
chr16:2777763|2778083 hsa-miR-12131 0 1 0
chr16:2777763|2778083 hsa-miR-214-5p 0 1 0
chr16:2777763|2778083 hsa-miR-6840-3p 1 1 0
chr16:2777763|2778083 hsa-miR-1273h-3p 1 0 0
chr16:2777763|2778083 hsa-miR-4726-3p 1 0 0
chr16:2777763|2778083 hsa-miR-6765-5p 1 0 0
chr16:2777763|2778083 hsa-miR-3150a-3p 1 0 0
chr16:2777763|2778083 hsa-miR-6861-5p 1 0 0
chr16:2777763|2778083 hsa-miR-7106-5p 1 0 0
chr16:2777763|2778083 hsa-miR-4687-3p 1 0 0
chr16:2777763|2778083 hsa-miR-1233-3p 0 1 0
chr16:2777763|2778083 hsa-miR-3622a-5p 1 1 0
chr16:2777763|2778083 hsa-miR-6807-5p 0 1 0
chr16:2777763|2778083 hsa-miR-6880-5p 1 0 0
chr16:2777763|2778083 hsa-miR-3622b-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6842-3p 1 1 0
chr16:2777763|2778083 hsa-miR-6721-5p 1 0 0
chr16:2777763|2778083 hsa-miR-5589-5p 0 1 0
chr16:2777763|2778083 hsa-miR-6841-3p 0 1 0
chr16:2777763|2778083 hsa-miR-6726-3p 1 0 0
chr16:2777763|2778083 hsa-miR-1915-5p 0 1 0
chr16:2777763|2778083 hsa-miR-3180-3p 1 0 0
chr16:2777763|2778083 hsa-miR-6805-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6827-5p 0 1 0
chr16:2777763|2778083 hsa-miR-6765-3p 1 0 0
chr16:2777763|2778083 hsa-miR-939-3p 0 1 0
chr16:2777763|2778083 hsa-miR-1226-5p 1 0 0
chr16:2777763|2778083 hsa-miR-1229-5p 1 0 0
chr16:2777763|2778083 hsa-miR-1908-3p 1 0 0
chr16:2777763|2778083 hsa-miR-1228-5p 1 1 0
chr16:2777763|2778083 hsa-miR-92b-5p 1 0 0
chr16:2777763|2778083 hsa-miR-3202 0 1 0
chr16:2777763|2778083 hsa-miR-6821-3p 0 1 0
chr16:2777763|2778083 hsa-miR-4638-3p 0 1 0
chr16:2777763|2778083 hsa-miR-149-3p 1 0 0
chr16:2777763|2778083 hsa-miR-6736-3p 0 1 0
chr16:2777763|2778083 hsa-miR-6886-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6743-3p 1 1 0
chr16:2777763|2778083 hsa-miR-6785-3p 1 1 0
chr16:2777763|2778083 hsa-miR-4758-3p 1 0 0
chr16:2777763|2778083 hsa-miR-4750-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6814-5p 1 0 0
chr16:2777763|2778083 hsa-miR-3074-5p 0 1 0
chr16:2777763|2778083 hsa-miR-6768-3p 0 1 0
chr16:2777763|2778083 hsa-miR-6748-3p 0 1 0
chr16:2777763|2778083 hsa-miR-6779-3p 0 1 0
chr16:2777763|2778083 hsa-miR-6812-3p 0 1 0
chr16:2777763|2778083 hsa-miR-6800-3p 0 1 0
chr16:2777763|2778083 hsa-miR-18b-3p 1 0 0
chr16:2777763|2778083 hsa-miR-10400-5p 1 0 0
chr16:2777763|2778083 hsa-miR-1207-5p 1 0 0
chr16:2777763|2778083 hsa-miR-4763-3p 1 0 0
chr16:2777763|2778083 hsa-miR-6769b-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6743-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6752-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6756-5p 1 1 0
chr16:2777763|2778083 hsa-miR-6815-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6851-5p 1 0 0
chr16:2777763|2778083 hsa-miR-7110-5p 1 0 0
chr16:2777763|2778083 hsa-miR-11181-3p 0 1 0
chr16:2777763|2778083 hsa-miR-1249-5p 0 1 0
chr16:2777763|2778083 hsa-miR-6797-5p 1 1 0
chr16:2777763|2778083 hsa-miR-4685-3p 1 0 0
chr16:2777763|2778083 hsa-miR-3620-5p 1 0 0
chr16:2777763|2778083 hsa-miR-4728-5p 1 1 0
chr16:2777763|2778083 hsa-miR-5189-5p 1 0 0
chr16:2777763|2778083 hsa-miR-5196-5p 0 1 0
chr16:2777763|2778083 hsa-miR-10396b-5p 1 0 0
chr16:2777763|2778083 hsa-miR-1237-5p 1 0 0
chr16:2777763|2778083 hsa-miR-328-5p 1 0 0
chr16:2777763|2778083 hsa-miR-4745-5p 1 0 0
chr16:2777763|2778083 hsa-miR-6848-5p 1 0 0
chr16:2777763|2778083 hsa-miR-4758-5p 1 0 0
chr16:2777763|2778083 hsa-miR-3940-5p 1 0 0
chr16:2777763|2778083 hsa-miR-4747-5p 0 1 0
chr16:2777763|2778083 hsa-miR-6791-5p 0 1 0
chr16:2777763|2778083 hsa-miR-6775-3p 0 1 0
chr16:2777763|2778083 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:2777763|2778083
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MAHLSNAASDTRPARPSLGCLCKGEVKWGALTLM
Nucleotide Sequence CTGGCTCATCTCTCCAACGCCGCCTCCGACACCCGCCCAGCACGACCCAGCCTGGGGTGTCTCTGCAAGGGAGAGGTCAAGTGGGGGGCCCTCACTCTCATGTAA
CircID chr16:2777763|2778083
ORF Type ORF2
Protein Length 66
Nucleotide Length 198
Protein Sequence MQDSVQHSGNRALVERAASQENQVSRPFQSRNAAKQEGGQAPRAPGARSCPFPPPAKSGRQPLPCL
Nucleotide Sequence ATGCAGGATAGTGTCCAGCATTCAGGAAACAGGGCCTTGGTGGAAAGAGCGGCCAGCCAGGAGAATCAAGTCTCTAGGCCTTTTCAGAGCCGAAATGCAGCCAAGCAGGAAGGCGGACAGGCGCCCAGGGCTCCTGGGGCAAGGAGCTGCCCCTTCCCTCCTCCTGCGAAGAGCGGTCGCCAACCGCTCCCGTGCCTC
CircID chr16:2777763|2778083
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MGRCRIVSSIQETGPWWKERPARRIKSLGLFRAEMQPSRKADRRPGLLGQGAAPSLLLRRAVANRSRA
Nucleotide Sequence TTGGGGCGATGCAGGATAGTGTCCAGCATTCAGGAAACAGGGCCTTGGTGGAAAGAGCGGCCAGCCAGGAGAATCAAGTCTCTAGGCCTTTTCAGAGCCGAAATGCAGCCAAGCAGGAAGGCGGACAGGCGCCCAGGGCTCCTGGGGCAAGGAGCTGCCCCTTCCCTCCTCCTGCGAAGAGCGGTCGCCAACCGCTCCCGTGCC
CircID chr16:2777763|2778083
ORF Type ORF4
Protein Length 53
Nucleotide Length 162
Protein Sequence MATALRRRREGAAPCPRSPGRLSAFLLGCISALKRPRDLILLAGRSFHQGPVS
Nucleotide Sequence TTGGCGACCGCTCTTCGCAGGAGGAGGGAAGGGGCAGCTCCTTGCCCCAGGAGCCCTGGGCGCCTGTCCGCCTTCCTGCTTGGCTGCATTTCGGCTCTGAAAAGGCCTAGAGACTTGATTCTCCTGGCTGGCCGCTCTTTCCACCAAGGCCCTGTTTCCTGA
CircID chr16:2777763|2778083
ORF Type ORF5
Protein Length 48
Nucleotide Length 144
Protein Sequence MLDTILHRPKLHLHESEGPPLDLSLAETPQAGSCWAGVGGGVGEMSQR
Nucleotide Sequence ATGCTGGACACTATCCTGCATCGCCCCAAGTTACATTTACATGAGAGTGAGGGCCCCCCACTTGACCTCTCCCTTGCAGAGACACCCCAGGCTGGGTCGTGCTGGGCGGGTGTCGGAGGCGGCGTTGGAGAGATGAGCCAGAGG
CircID chr16:2777763|2778083
ORF Type ORF6
Protein Length 56
Nucleotide Length 171
Protein Sequence MAALSTKALFPECWTLSCIAPSYIYMRVRAPHLTSPLQRHPRLGRAGRVSEAALER
Nucleotide Sequence CTGGCCGCTCTTTCCACCAAGGCCCTGTTTCCTGAATGCTGGACACTATCCTGCATCGCCCCAAGTTACATTTACATGAGAGTGAGGGCCCCCCACTTGACCTCTCCCTTGCAGAGACACCCCAGGCTGGGTCGTGCTGGGCGGGTGTCGGAGGCGGCGTTGGAGAGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab