CircNet

General Information

circRNA Basic Information

CircID	chr16:28106077\|28106214
Strand	-
CircType	exon
Host Gene	ENSG00000169180.10;
Algorism	CIRI2;
Sequence	AGGGCGATGATGCTGGGGAGGAAGGGCTTGAACACCTGGCCTGGCTCCTGGACCACCACCTGCAGGATCTTCAGAAACTTCTCCACCACCCGGCAGCCTGTGCTGCCCTCGTGGAGGATGCTCTCGGCTAACTGCTCT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:28106077\|28106214	hsa-miR-498-5p	0	0	1
chr16:28106077\|28106214	hsa-miR-498-3p	0	0	1
chr16:28106077\|28106214	hsa-miR-657	0	0	1
chr16:28106077\|28106214	hsa-miR-665	0	1	1
chr16:28106077\|28106214	hsa-miR-1205	0	0	1
chr16:28106077\|28106214	hsa-miR-1293	0	1	1
chr16:28106077\|28106214	hsa-miR-1249-5p	0	0	1
chr16:28106077\|28106214	hsa-miR-1249-3p	0	0	1
chr16:28106077\|28106214	hsa-miR-876-3p	0	0	1
chr16:28106077\|28106214	hsa-miR-338-3p	0	1	1
chr16:28106077\|28106214	hsa-miR-323-5p	0	0	1
chr16:28106077\|28106214	hsa-miR-129-3p	0	0	1
chr16:28106077\|28106214	hsa-miR-1183	1	0	0
chr16:28106077\|28106214	hsa-miR-4531	0	1	0
chr16:28106077\|28106214	hsa-miR-4688	1	0	0
chr16:28106077\|28106214	hsa-miR-12119	1	0	0
chr16:28106077\|28106214	hsa-miR-12127	1	0	0
chr16:28106077\|28106214	hsa-miR-370-3p	1	0	0
chr16:28106077\|28106214	hsa-miR-6749-3p	0	1	0
chr16:28106077\|28106214	hsa-miR-4747-3p	1	0	0
chr16:28106077\|28106214	hsa-miR-323a-5p	0	1	0
chr16:28106077\|28106214	hsa-miR-1972	1	1	0
chr16:28106077\|28106214	hsa-miR-1233-3p	0	1	0
chr16:28106077\|28106214	hsa-miR-1227-5p	1	0	0
chr16:28106077\|28106214	hsa-miR-505-5p	0	1	0
chr16:28106077\|28106214	hsa-miR-6796-3p	0	1	0
chr16:28106077\|28106214	hsa-miR-1226-5p	1	1	0
chr16:28106077\|28106214	hsa-miR-3667-3p	0	1	0
chr16:28106077\|28106214	hsa-miR-3616-3p	0	1	0
chr16:28106077\|28106214	hsa-miR-6886-3p	0	1	0
chr16:28106077\|28106214	hsa-miR-6756-5p	1	0	0
chr16:28106077\|28106214	hsa-miR-6803-5p	1	0	0
chr16:28106077\|28106214	hsa-miR-6851-5p	1	1	0
chr16:28106077\|28106214	hsa-miR-6879-5p	0	1	0
chr16:28106077\|28106214	hsa-miR-1909-3p	1	0	0
chr16:28106077\|28106214	hsa-miR-328-5p	1	0	0
chr16:28106077\|28106214	hsa-miR-4632-5p	1	1	0
chr16:28106077\|28106214	hsa-miR-6735-5p	0	1	0
chr16:28106077\|28106214	hsa-miR-7843-5p	0	1	0
chr16:28106077\|28106214	hsa-miR-10394-5p	0	1	0
chr16:28106077\|28106214	hsa-miR-4691-5p	0	1	0
chr16:28106077\|28106214	hsa-miR-129-1-3p	0	1	0
chr16:28106077\|28106214	hsa-miR-129-2-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:28106077\|28106214
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MMLGRKGLNTWPGSWTTTCRIFRNFSTTRQPVLPSWRMLSANCS
Nucleotide Sequence	ATGATGCTGGGGAGGAAGGGCTTGAACACCTGGCCTGGCTCCTGGACCACCACCTGCAGGATCTTCAGAAACTTCTCCACCACCCGGCAGCCTGTGCTGCCCTCGTGGAGGATGCTCTCGGCTAACTGCTCT

CircID	chr16:28106077\|28106214
ORF Type	ORF2
Protein Length	32
Nucleotide Length	96
Protein Sequence	MAPGPPPAGSSETSPPPGSLCCPRGGCSRLTA
Nucleotide Sequence	CTGGCTCCTGGACCACCACCTGCAGGATCTTCAGAAACTTCTCCACCACCCGGCAGCCTGTGCTGCCCTCGTGGAGGATGCTCTCGGCTAACTGCT

CircID	chr16:28106077\|28106214
ORF Type	ORF3
Protein Length	31
Nucleotide Length	96
Protein Sequence	MAWLLDHHLQDLQKLLHHPAACAALVEDALG
Nucleotide Sequence	CTGGCCTGGCTCCTGGACCACCACCTGCAGGATCTTCAGAAACTTCTCCACCACCCGGCAGCCTGTGCTGCCCTCGTGGAGGATGCTCTCGGCTAA

CircID	chr16:28106077\|28106214
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MPGGGEVSEDPAGGGPGARPGVQALPPQHHRP
Nucleotide Sequence	CTGCCGGGTGGTGGAGAAGTTTCTGAAGATCCTGCAGGTGGTGGTCCAGGAGCCAGGCCAGGTGTTCAAGCCCTTCCTCCCCAGCATCATCGCCCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information