CircRNA Information

General Information
circRNA Basic Information
CircID chr16:28477598|28477847
Strand +
CircType exon
Host Gene ENSG00000261832.3;
Algorism CIRI2;
Sequence GTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGGTCAGCATTGGCCGGGCAAGGGCTGGGGGTGGCCTGTCCAGGGACACCCAGGGCAGGGATGTCTGGGACTGAAGCCTCACCCCTGCTCTCTGCCCTCCCAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:28477598|28477847 hsa-let-7b-5p 0 0 1
chr16:28477598|28477847 hsa-let-7b-3p 0 0 1
chr16:28477598|28477847 hsa-let-7c-5p 0 0 1
chr16:28477598|28477847 hsa-let-7c-3p 0 0 1
chr16:28477598|28477847 hsa-let-7d-5p 0 0 1
chr16:28477598|28477847 hsa-let-7d-3p 0 0 1
chr16:28477598|28477847 hsa-let-7e-5p 0 0 1
chr16:28477598|28477847 hsa-let-7e-3p 0 0 1
chr16:28477598|28477847 hsa-miR-98-5p 0 0 1
chr16:28477598|28477847 hsa-miR-98-3p 0 0 1
chr16:28477598|28477847 hsa-let-7g-5p 0 0 1
chr16:28477598|28477847 hsa-let-7g-3p 0 0 1
chr16:28477598|28477847 hsa-let-7i-5p 0 0 1
chr16:28477598|28477847 hsa-let-7i-3p 0 0 1
chr16:28477598|28477847 hsa-miR-383-5p 0 0 1
chr16:28477598|28477847 hsa-miR-383-3p 0 0 1
chr16:28477598|28477847 hsa-miR-527 0 0 1
chr16:28477598|28477847 hsa-miR-604 0 1 1
chr16:28477598|28477847 hsa-miR-609 0 0 1
chr16:28477598|28477847 hsa-miR-874-5p 0 0 1
chr16:28477598|28477847 hsa-miR-874-3p 0 0 1
chr16:28477598|28477847 hsa-miR-665 0 0 1
chr16:28477598|28477847 hsa-miR-873-5p 0 0 1
chr16:28477598|28477847 hsa-miR-873-3p 0 0 1
chr16:28477598|28477847 hsa-miR-1250-5p 0 0 1
chr16:28477598|28477847 hsa-miR-1250-3p 0 0 1
chr16:28477598|28477847 hsa-miR-1281 0 0 1
chr16:28477598|28477847 hsa-miR-1225-3p 0 1 1
chr16:28477598|28477847 hsa-miR-485-5p 0 0 1
chr16:28477598|28477847 hsa-miR-146b-3p 0 0 1
chr16:28477598|28477847 hsa-miR-361-3p 0 0 1
chr16:28477598|28477847 hsa-miR-628-5p 0 0 1
chr16:28477598|28477847 hsa-miR-485-3p 0 0 1
chr16:28477598|28477847 hsa-miR-455-3p 0 0 1
chr16:28477598|28477847 hsa-miR-518a-5p 0 0 1
chr16:28477598|28477847 hsa-miR-7 0 0 1
chr16:28477598|28477847 hsa-let-7a 0 0 1
chr16:28477598|28477847 hsa-let-7f 0 0 1
chr16:28477598|28477847 hsa-miR-129-3p 0 0 1
chr16:28477598|28477847 hsa-miR-612 0 1 0
chr16:28477598|28477847 hsa-miR-1539 0 1 0
chr16:28477598|28477847 hsa-miR-2278 0 1 0
chr16:28477598|28477847 hsa-miR-3188 0 1 0
chr16:28477598|28477847 hsa-miR-4270 0 1 0
chr16:28477598|28477847 hsa-miR-4281 1 0 0
chr16:28477598|28477847 hsa-miR-4292 0 1 0
chr16:28477598|28477847 hsa-miR-3907 0 1 0
chr16:28477598|28477847 hsa-miR-4458 0 1 0
chr16:28477598|28477847 hsa-miR-4656 1 0 0
chr16:28477598|28477847 hsa-miR-9718 1 1 0
chr16:28477598|28477847 hsa-miR-18a-3p 0 1 0
chr16:28477598|28477847 hsa-miR-6840-3p 0 1 0
chr16:28477598|28477847 hsa-miR-6879-3p 0 1 0
chr16:28477598|28477847 hsa-miR-6894-5p 1 0 0
chr16:28477598|28477847 hsa-miR-1972 0 1 0
chr16:28477598|28477847 hsa-miR-6799-5p 1 0 0
chr16:28477598|28477847 hsa-miR-6510-5p 0 1 0
chr16:28477598|28477847 hsa-miR-3192-5p 0 1 0
chr16:28477598|28477847 hsa-miR-505-5p 1 0 0
chr16:28477598|28477847 hsa-miR-197-5p 0 1 0
chr16:28477598|28477847 hsa-miR-6776-5p 1 0 0
chr16:28477598|28477847 hsa-miR-6849-3p 1 0 0
chr16:28477598|28477847 hsa-miR-4728-3p 0 1 0
chr16:28477598|28477847 hsa-miR-1915-5p 0 1 0
chr16:28477598|28477847 hsa-miR-3663-5p 0 1 0
chr16:28477598|28477847 hsa-miR-3190-3p 0 1 0
chr16:28477598|28477847 hsa-miR-6760-5p 1 0 0
chr16:28477598|28477847 hsa-miR-6782-5p 1 1 0
chr16:28477598|28477847 hsa-miR-6740-5p 0 1 0
chr16:28477598|28477847 hsa-miR-1908-3p 1 0 0
chr16:28477598|28477847 hsa-miR-4783-3p 1 1 0
chr16:28477598|28477847 hsa-miR-6784-5p 1 0 0
chr16:28477598|28477847 hsa-miR-4787-5p 1 0 0
chr16:28477598|28477847 hsa-miR-4638-3p 0 1 0
chr16:28477598|28477847 hsa-miR-149-3p 0 1 0
chr16:28477598|28477847 hsa-miR-6717-5p 0 1 0
chr16:28477598|28477847 hsa-miR-6742-3p 0 1 0
chr16:28477598|28477847 hsa-let-7f-5p 0 1 0
chr16:28477598|28477847 hsa-let-7a-5p 0 1 0
chr16:28477598|28477847 hsa-miR-5571-3p 0 1 0
chr16:28477598|28477847 hsa-miR-3180-5p 0 1 0
chr16:28477598|28477847 hsa-miR-4746-3p 1 0 0
chr16:28477598|28477847 hsa-miR-6868-5p 0 1 0
chr16:28477598|28477847 hsa-miR-4746-5p 0 1 0
chr16:28477598|28477847 hsa-miR-668-5p 0 1 0
chr16:28477598|28477847 hsa-miR-4717-5p 0 1 0
chr16:28477598|28477847 hsa-miR-4520-3p 0 1 0
chr16:28477598|28477847 hsa-miR-1233-5p 1 0 0
chr16:28477598|28477847 hsa-miR-1273h-5p 1 1 0
chr16:28477598|28477847 hsa-miR-6778-5p 1 1 0
chr16:28477598|28477847 hsa-miR-6816-5p 1 0 0
chr16:28477598|28477847 hsa-miR-6851-5p 1 0 0
chr16:28477598|28477847 hsa-miR-6722-3p 1 1 0
chr16:28477598|28477847 hsa-miR-6780a-5p 0 1 0
chr16:28477598|28477847 hsa-miR-6879-5p 0 1 0
chr16:28477598|28477847 hsa-miR-4728-5p 0 1 0
chr16:28477598|28477847 hsa-miR-328-5p 0 1 0
chr16:28477598|28477847 hsa-miR-3689a-3p 0 1 0
chr16:28477598|28477847 hsa-miR-4632-5p 0 1 0
chr16:28477598|28477847 hsa-miR-4649-5p 1 0 0
chr16:28477598|28477847 hsa-miR-4685-5p 1 1 0
chr16:28477598|28477847 hsa-miR-6735-5p 0 1 0
chr16:28477598|28477847 hsa-miR-6883-5p 0 1 0
chr16:28477598|28477847 hsa-miR-4436b-3p 0 1 0
chr16:28477598|28477847 hsa-miR-6831-5p 0 1 0
chr16:28477598|28477847 hsa-miR-6511a-5p 0 1 0
chr16:28477598|28477847 hsa-miR-7843-5p 0 1 0
chr16:28477598|28477847 hsa-miR-6785-5p 0 1 0
chr16:28477598|28477847 hsa-miR-6791-5p 0 1 0
chr16:28477598|28477847 hsa-miR-6805-3p 1 0 0
chr16:28477598|28477847 hsa-miR-129-1-3p 0 1 0
chr16:28477598|28477847 hsa-miR-129-2-3p 0 1 0
chr16:28477598|28477847 hsa-miR-3927-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:28477598|28477847
ORF Type ORF1
Protein Length 55
Nucleotide Length 168
Protein Sequence MPSIYLVFLIILYEGLLGGAAYVNTFHNIALEVSIGRARAGGGLSRDTQGRDVWD
Nucleotide Sequence CTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGGTCAGCATTGGCCGGGCAAGGGCTGGGGGTGGCCTGTCCAGGGACACCCAGGGCAGGGATGTCTGGGACTGA

CircID chr16:28477598|28477847
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MAGQGLGVACPGTPRAGMSGTEASPLLSALPDQ
Nucleotide Sequence TTGGCCGGGCAAGGGCTGGGGGTGGCCTGTCCAGGGACACCCAGGGCAGGGATGTCTGGGACTGAAGCCTCACCCCTGCTCTCTGCCCTCCCAGACCAGTGA

CircID chr16:28477598|28477847
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MGLKPHPCSLPSQTSDEHREFAMAA
Nucleotide Sequence CTGGGACTGAAGCCTCACCCCTGCTCTCTGCCCTCCCAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCC

CircID chr16:28477598|28477847
ORF Type ORF4
Protein Length 80
Nucleotide Length 240
Protein Sequence MQTPGAHHWSGRAESRGEASVPDIPALGVPGQATPSPCPANADLQGDVVEGVHVGCASQEPLIQNDQEDEVDAWQKAEPH
Nucleotide Sequence TTGCAAACTCCCGGTGCTCATCACTGGTCTGGGAGGGCAGAGAGCAGGGGTGAGGCTTCAGTCCCAGACATCCCTGCCCTGGGTGTCCCTGGACAGGCCACCCCCAGCCCTTGCCCGGCCAATGCTGACCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCACAC

CircID chr16:28477598|28477847
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MGGQRAGVRLQSQTSLPWVSLDRPPPALARPMLTSRAMLWKVFT
Nucleotide Sequence CTGGGAGGGCAGAGAGCAGGGGTGAGGCTTCAGTCCCAGACATCCCTGCCCTGGGTGTCCCTGGACAGGCCACCCCCAGCCCTTGCCCGGCCAATGCTGACCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites