CircNet

General Information

circRNA Basic Information

CircID	chr16:28538012\|28538130
Strand	+
CircType	exon
Host Gene	ENSG00000176046.8;
Algorism	CIRI2;
Sequence	CAAGAGAGAAGCTGCTGCCAACACCAACCGCCCCAGCCCTGGCGGGCACGAGAGGAAACTGGTGACCAAGCTGCAGAATTCAGAGAGGAAGAAGCGAGGGGCACGGCGCTGAGACAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:28538012\|28538130	hsa-miR-646	0	0	1
chr16:28538012\|28538130	hsa-miR-1301-5p	0	0	1
chr16:28538012\|28538130	hsa-miR-1301-3p	0	0	1
chr16:28538012\|28538130	hsa-miR-942-5p	0	0	1
chr16:28538012\|28538130	hsa-miR-942-3p	0	0	1
chr16:28538012\|28538130	hsa-miR-1226-5p	0	0	1
chr16:28538012\|28538130	hsa-miR-1226-3p	0	0	1
chr16:28538012\|28538130	hsa-miR-1238-5p	0	0	1
chr16:28538012\|28538130	hsa-miR-1238-3p	0	0	1
chr16:28538012\|28538130	hsa-miR-1205	0	0	1
chr16:28538012\|28538130	hsa-miR-885-3p	0	0	1
chr16:28538012\|28538130	hsa-miR-1184	0	0	1
chr16:28538012\|28538130	hsa-miR-544	0	0	1
chr16:28538012\|28538130	hsa-miR-608	1	1	0
chr16:28538012\|28538130	hsa-miR-762	0	1	0
chr16:28538012\|28538130	hsa-miR-3183	0	1	0
chr16:28538012\|28538130	hsa-miR-3196	1	0	0
chr16:28538012\|28538130	hsa-miR-4320	0	1	0
chr16:28538012\|28538130	hsa-miR-4453	0	1	0
chr16:28538012\|28538130	hsa-miR-4492	0	1	0
chr16:28538012\|28538130	hsa-miR-4682	0	1	0
chr16:28538012\|28538130	hsa-miR-5047	0	1	0
chr16:28538012\|28538130	hsa-miR-5787	0	1	0
chr16:28538012\|28538130	hsa-miR-9899	1	0	0
chr16:28538012\|28538130	hsa-miR-6825-5p	1	0	0
chr16:28538012\|28538130	hsa-miR-4687-3p	1	0	0
chr16:28538012\|28538130	hsa-miR-8069	1	0	0
chr16:28538012\|28538130	hsa-miR-6787-3p	1	0	0
chr16:28538012\|28538130	hsa-miR-7108-5p	1	0	0
chr16:28538012\|28538130	hsa-miR-6774-3p	1	0	0
chr16:28538012\|28538130	hsa-miR-5006-5p	1	1	0
chr16:28538012\|28538130	hsa-miR-4707-3p	0	1	0
chr16:28538012\|28538130	hsa-miR-6803-3p	0	1	0
chr16:28538012\|28538130	hsa-miR-6749-5p	1	0	0
chr16:28538012\|28538130	hsa-miR-7111-3p	0	1	0
chr16:28538012\|28538130	hsa-miR-6889-3p	1	0	0
chr16:28538012\|28538130	hsa-miR-1307-3p	1	0	0
chr16:28538012\|28538130	hsa-miR-4778-3p	0	1	0
chr16:28538012\|28538130	hsa-miR-6795-3p	1	1	0
chr16:28538012\|28538130	hsa-miR-6888-3p	0	1	0
chr16:28538012\|28538130	hsa-miR-6812-5p	1	0	0
chr16:28538012\|28538130	hsa-miR-6816-5p	1	0	0
chr16:28538012\|28538130	hsa-miR-4685-5p	1	1	0
chr16:28538012\|28538130	hsa-miR-6724-5p	1	0	0
chr16:28538012\|28538130	hsa-miR-3059-5p	1	1	0
chr16:28538012\|28538130	hsa-miR-6529-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:28538012\|28538130
ORF Type	ORF1
Protein Length	27
Nucleotide Length	81
Protein Sequence	MNSAAWSPVSSRARQGWGGWCWQQLLS
Nucleotide Sequence	CTGAATTCTGCAGCTTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTGGTGTTGGCAGCAGCTTCTCTCT

CircID	chr16:28538012\|28538130
ORF Type	ORF2
Protein Length	25
Nucleotide Length	75
Protein Sequence	MQLGHQFPLVPARAGAVGVGSSFSL
Nucleotide Sequence	CTGCAGCTTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTGGTGTTGGCAGCAGCTTCTCTCTT

CircID	chr16:28538012\|28538130
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	LSQRRAPRFFLSEFCSLVTSFLSCPPGLGRLVLAAASLL
Nucleotide Sequence	CTGTCTCAGCGCCGTGCCCCTCGCTTCTTCCTCTCTGAATTCTGCAGCTTGGTCACCAGTTTCCTCTCGTGCCCGCCAGGGCTGGGGCGGTTGGTGTTGGCAGCAGCTTCTCTCTTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information