CircRNA Information

General Information
circRNA Basic Information
CircID chr16:286583|286735
Strand +
CircType exon
Host Gene ENSG00000185615.14;
Algorism CIRI2;
Sequence CTTCCGACCTGGCCCTGCTGGGAAGTACTTGAGAGTAGGGAAGCCGTGCACAGCGAAGGCATCCAGCTCGTTGGCCGTGGCATCCAGCTCAGCAATGATGATGTCCTCGTGGTCTTGGTACTTCTCAGCCAATGCCTCCCAGGCAGGGGCCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:286583|286735 hsa-miR-26b-5p 0 0 1
chr16:286583|286735 hsa-miR-26b-3p 0 0 1
chr16:286583|286735 hsa-miR-214-5p 0 0 1
chr16:286583|286735 hsa-miR-214-3p 0 0 1
chr16:286583|286735 hsa-miR-558 0 0 1
chr16:286583|286735 hsa-miR-611 0 0 1
chr16:286583|286735 hsa-miR-639 0 0 1
chr16:286583|286735 hsa-miR-647 0 0 1
chr16:286583|286735 hsa-miR-650 0 0 1
chr16:286583|286735 hsa-miR-661 0 0 1
chr16:286583|286735 hsa-miR-1287-5p 0 0 1
chr16:286583|286735 hsa-miR-1287-3p 0 0 1
chr16:286583|286735 hsa-miR-1297 0 0 1
chr16:286583|286735 hsa-miR-1253 0 0 1
chr16:286583|286735 hsa-miR-1256 0 0 1
chr16:286583|286735 hsa-miR-513c-5p 0 0 1
chr16:286583|286735 hsa-miR-513c-3p 0 0 1
chr16:286583|286735 hsa-miR-532-5p 0 0 1
chr16:286583|286735 hsa-miR-628-5p 0 0 1
chr16:286583|286735 hsa-miR-26a 0 0 1
chr16:286583|286735 hsa-miR-1300 0 0 1
chr16:286583|286735 hsa-miR-1254 0 0 1
chr16:286583|286735 hsa-miR-762 1 1 0
chr16:286583|286735 hsa-miR-3612 0 1 0
chr16:286583|286735 hsa-miR-4465 0 1 0
chr16:286583|286735 hsa-miR-4487 0 1 0
chr16:286583|286735 hsa-miR-4530 0 1 0
chr16:286583|286735 hsa-miR-4663 1 1 0
chr16:286583|286735 hsa-miR-4673 1 0 0
chr16:286583|286735 hsa-miR-6132 0 1 0
chr16:286583|286735 hsa-miR-12121 0 1 0
chr16:286583|286735 hsa-miR-210-5p 0 1 0
chr16:286583|286735 hsa-miR-6799-5p 1 0 0
chr16:286583|286735 hsa-miR-4786-5p 1 0 0
chr16:286583|286735 hsa-miR-3192-5p 0 1 0
chr16:286583|286735 hsa-miR-144-5p 0 1 0
chr16:286583|286735 hsa-miR-770-5p 1 0 0
chr16:286583|286735 hsa-miR-5589-5p 0 1 0
chr16:286583|286735 hsa-miR-6895-5p 0 1 0
chr16:286583|286735 hsa-miR-3922-5p 1 0 0
chr16:286583|286735 hsa-miR-624-5p 0 1 0
chr16:286583|286735 hsa-miR-5585-5p 0 1 0
chr16:286583|286735 hsa-miR-26a-1-3p 0 1 0
chr16:286583|286735 hsa-miR-1273h-5p 0 1 0
chr16:286583|286735 hsa-miR-5001-5p 1 0 0
chr16:286583|286735 hsa-miR-6754-5p 1 0 0
chr16:286583|286735 hsa-miR-6819-5p 1 0 0
chr16:286583|286735 hsa-miR-6779-5p 0 1 0
chr16:286583|286735 hsa-miR-3620-5p 1 0 0
chr16:286583|286735 hsa-miR-6836-5p 0 1 0
chr16:286583|286735 hsa-miR-328-5p 1 0 0
chr16:286583|286735 hsa-miR-3619-5p 0 1 0
chr16:286583|286735 hsa-miR-26a-5p 0 1 0
chr16:286583|286735 hsa-miR-1912-5p 0 1 0
chr16:286583|286735 hsa-miR-26a-2-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:286583|286735
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MRVGKPCTAKASSSLAVASSSAMMMSSWSWYFSANASQAGA
Nucleotide Sequence TTGAGAGTAGGGAAGCCGTGCACAGCGAAGGCATCCAGCTCGTTGGCCGTGGCATCCAGCTCAGCAATGATGATGTCCTCGTGGTCTTGGTACTTCTCAGCCAATGCCTCCCAGGCAGGGGCC
CircID chr16:286583|286735
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MAPAWEALAEKYQDHEDIIIAELDATANELDAFAVHGFPTLKYFPAGPGRK
Nucleotide Sequence ATGGCCCCTGCCTGGGAGGCATTGGCTGAGAAGTACCAAGACCACGAGGACATCATCATTGCTGAGCTGGATGCCACGGCCAACGAGCTGGATGCCTTCGCTGTGCACGGCTTCCCTACTCTCAAGTACTTCCCAGCAGGGCCAGGTCGGAAG
CircID chr16:286583|286735
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MPGRHWLRSTKTTRTSSLLSWMPRPTSWMPSLCTASLLSSTSQQGQVG
Nucleotide Sequence CTGCCTGGGAGGCATTGGCTGAGAAGTACCAAGACCACGAGGACATCATCATTGCTGAGCTGGATGCCACGGCCAACGAGCTGGATGCCTTCGCTGTGCACGGCTTCCCTACTCTCAAGTACTTCCCAGCAGGGCCAGGTCGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab