CircRNA Information

General Information
circRNA Basic Information
CircID chr16:28723183|28723286
Strand +
CircType exon
Host Gene ENSG00000184110.13;
Algorism CIRI2;
Sequence TCCCCGCCTTCATTGTCCTCCTCCTCCTCATCCAGGCGCTTGGATTTCCTGTCGTGCTTCTTCTTAGCTTTGTCCTCCCGTTTCTTCTCGGCTGCCTTCTTGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:28723183|28723286 hsa-miR-765 1 1 1
chr16:28723183|28723286 hsa-miR-1253 0 0 1
chr16:28723183|28723286 hsa-miR-1255a 0 0 1
chr16:28723183|28723286 hsa-miR-1255b 0 0 1
chr16:28723183|28723286 hsa-miR-1254 0 0 1
chr16:28723183|28723286 hsa-miR-663 0 0 1
chr16:28723183|28723286 hsa-miR-650 1 0 0
chr16:28723183|28723286 hsa-miR-3185 1 1 0
chr16:28723183|28723286 hsa-miR-4271 1 0 0
chr16:28723183|28723286 hsa-miR-3612 1 0 0
chr16:28723183|28723286 hsa-miR-3911 1 0 0
chr16:28723183|28723286 hsa-miR-3937 1 0 0
chr16:28723183|28723286 hsa-miR-4429 1 0 0
chr16:28723183|28723286 hsa-miR-4467 1 0 0
chr16:28723183|28723286 hsa-miR-4488 1 0 0
chr16:28723183|28723286 hsa-miR-4496 1 0 0
chr16:28723183|28723286 hsa-miR-2392 1 0 0
chr16:28723183|28723286 hsa-miR-4538 1 0 0
chr16:28723183|28723286 hsa-miR-4689 1 0 0
chr16:28723183|28723286 hsa-miR-4710 1 0 0
chr16:28723183|28723286 hsa-miR-4739 1 0 0
chr16:28723183|28723286 hsa-miR-4751 1 0 0
chr16:28723183|28723286 hsa-miR-5698 1 0 0
chr16:28723183|28723286 hsa-miR-5787 1 0 0
chr16:28723183|28723286 hsa-miR-6088 1 0 0
chr16:28723183|28723286 hsa-miR-6125 1 0 0
chr16:28723183|28723286 hsa-miR-6133 1 0 0
chr16:28723183|28723286 hsa-miR-6165 1 0 0
chr16:28723183|28723286 hsa-miR-12114 1 0 0
chr16:28723183|28723286 hsa-miR-12118 1 1 0
chr16:28723183|28723286 hsa-miR-12120 1 0 0
chr16:28723183|28723286 hsa-miR-12124 0 1 0
chr16:28723183|28723286 hsa-miR-4433b-3p 1 0 0
chr16:28723183|28723286 hsa-miR-6734-5p 1 0 0
chr16:28723183|28723286 hsa-miR-1247-3p 1 0 0
chr16:28723183|28723286 hsa-miR-6765-5p 1 0 0
chr16:28723183|28723286 hsa-miR-7106-5p 1 1 0
chr16:28723183|28723286 hsa-miR-6825-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6894-5p 1 1 0
chr16:28723183|28723286 hsa-miR-125a-3p 1 0 0
chr16:28723183|28723286 hsa-miR-6799-5p 1 0 0
chr16:28723183|28723286 hsa-miR-5187-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6880-5p 1 0 0
chr16:28723183|28723286 hsa-miR-7847-3p 1 0 0
chr16:28723183|28723286 hsa-miR-4695-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6744-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6746-5p 1 0 0
chr16:28723183|28723286 hsa-miR-4709-3p 1 0 0
chr16:28723183|28723286 hsa-miR-4722-5p 1 0 0
chr16:28723183|28723286 hsa-miR-7154-3p 1 1 0
chr16:28723183|28723286 hsa-miR-1301-3p 1 0 0
chr16:28723183|28723286 hsa-miR-3180-3p 1 0 0
chr16:28723183|28723286 hsa-miR-6732-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6805-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6798-5p 1 0 0
chr16:28723183|28723286 hsa-miR-1224-5p 1 0 0
chr16:28723183|28723286 hsa-miR-3126-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6810-5p 1 0 0
chr16:28723183|28723286 hsa-miR-1226-5p 1 0 0
chr16:28723183|28723286 hsa-miR-885-3p 1 0 0
chr16:28723183|28723286 hsa-miR-4764-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6771-5p 1 0 0
chr16:28723183|28723286 hsa-miR-149-3p 1 0 0
chr16:28723183|28723286 hsa-miR-6878-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6720-3p 0 1 0
chr16:28723183|28723286 hsa-miR-6801-5p 1 0 0
chr16:28723183|28723286 hsa-miR-605-3p 0 1 0
chr16:28723183|28723286 hsa-miR-483-5p 1 1 0
chr16:28723183|28723286 hsa-miR-3200-5p 1 0 0
chr16:28723183|28723286 hsa-miR-5004-5p 1 1 0
chr16:28723183|28723286 hsa-miR-4520-3p 1 0 0
chr16:28723183|28723286 hsa-miR-10400-5p 1 0 0
chr16:28723183|28723286 hsa-miR-1233-5p 1 0 0
chr16:28723183|28723286 hsa-miR-1273h-5p 1 1 0
chr16:28723183|28723286 hsa-miR-6778-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6787-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6870-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6893-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6743-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6819-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6851-5p 1 0 0
chr16:28723183|28723286 hsa-miR-11181-3p 1 1 0
chr16:28723183|28723286 hsa-miR-1249-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6763-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6779-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6780a-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6797-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6808-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6879-5p 1 1 0
chr16:28723183|28723286 hsa-miR-7111-5p 1 1 0
chr16:28723183|28723286 hsa-miR-4728-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6780b-5p 1 0 0
chr16:28723183|28723286 hsa-miR-1237-5p 1 0 0
chr16:28723183|28723286 hsa-miR-4632-5p 1 0 0
chr16:28723183|28723286 hsa-miR-4649-5p 1 0 0
chr16:28723183|28723286 hsa-miR-4725-3p 1 0 0
chr16:28723183|28723286 hsa-miR-6729-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6738-5p 1 0 0
chr16:28723183|28723286 hsa-miR-675-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6794-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6795-5p 1 1 0
chr16:28723183|28723286 hsa-miR-6858-5p 1 1 0
chr16:28723183|28723286 hsa-miR-6883-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6887-5p 1 1 0
chr16:28723183|28723286 hsa-miR-4436b-3p 1 0 0
chr16:28723183|28723286 hsa-miR-4758-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6511a-5p 1 0 0
chr16:28723183|28723286 hsa-miR-6731-5p 1 0 0
chr16:28723183|28723286 hsa-miR-4665-5p 1 0 0
chr16:28723183|28723286 hsa-miR-3116 0 1 0
chr16:28723183|28723286 hsa-miR-3173-3p 1 0 0
chr16:28723183|28723286 hsa-miR-3679-5p 1 1 0
chr16:28723183|28723286 hsa-miR-6891-5p 0 1 0
chr16:28723183|28723286 hsa-miR-4716-3p 1 0 0
chr16:28723183|28723286 hsa-miR-6785-5p 1 1 0
chr16:28723183|28723286 hsa-miR-4667-5p 1 0 0
chr16:28723183|28723286 hsa-miR-320a-3p 1 0 0
chr16:28723183|28723286 hsa-miR-6859-5p 1 0 0
chr16:28723183|28723286 hsa-miR-1255b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:28723183|28723286
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MSSSSSSRRLDFLSCFFLALSSRFFSAAFL
Nucleotide Sequence TTGTCCTCCTCCTCCTCATCCAGGCGCTTGGATTTCCTGTCGTGCTTCTTCTTAGCTTTGTCCTCCCGTTTCTTCTCGGCTGCCTTCTTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab