CircRNA Information

General Information
circRNA Basic Information
CircID chr16:28835163|28835399
Strand +
CircType exon
Host Gene ENSG00000168488.17;
Algorism CIRI2;
Sequence CTGGACAGGACTGGGGGCCGCATGCTGGGACTGCGGCTGGCTTCCAGTAGGCGTGGTAGCCGGCTGCGGCTGGTGGGCATGGAGCTGTGTGGCATGGTGTGGGTAGGACTGGTGAACAGTGGCTGCAGCAGGAAAGAGGGAGAACCAGTGCTGAGCACACCAGAGGGGGCTGGCACACAGCCCAGAGCAGAGGGACCAGGCGCAGGACTCACCATAAAGGGCTTGGGGGGTAGGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:28835163|28835399 hsa-miR-197-5p 0 0 1
chr16:28835163|28835399 hsa-miR-197-3p 0 0 1
chr16:28835163|28835399 hsa-miR-198 0 0 1
chr16:28835163|28835399 hsa-miR-370-5p 0 0 1
chr16:28835163|28835399 hsa-miR-370-3p 0 0 1
chr16:28835163|28835399 hsa-miR-326 0 0 1
chr16:28835163|28835399 hsa-miR-584-5p 0 0 1
chr16:28835163|28835399 hsa-miR-584-3p 0 0 1
chr16:28835163|28835399 hsa-miR-612 0 0 1
chr16:28835163|28835399 hsa-miR-1226-5p 0 0 1
chr16:28835163|28835399 hsa-miR-1226-3p 0 0 1
chr16:28835163|28835399 hsa-miR-1227-5p 0 0 1
chr16:28835163|28835399 hsa-miR-1227-3p 0 0 1
chr16:28835163|28835399 hsa-miR-1202 0 1 1
chr16:28835163|28835399 hsa-miR-1208 0 1 1
chr16:28835163|28835399 hsa-miR-1243 0 0 1
chr16:28835163|28835399 hsa-miR-671-5p 0 0 1
chr16:28835163|28835399 hsa-miR-1184 0 1 1
chr16:28835163|28835399 hsa-miR-361-3p 0 0 1
chr16:28835163|28835399 hsa-miR-767-3p 0 0 1
chr16:28835163|28835399 hsa-miR-338-3p 0 0 1
chr16:28835163|28835399 hsa-miR-330-5p 0 1 1
chr16:28835163|28835399 hsa-miR-491-3p 0 0 1
chr16:28835163|28835399 hsa-miR-642 0 0 1
chr16:28835163|28835399 hsa-miR-1285 0 0 1
chr16:28835163|28835399 hsa-miR-129-3p 0 0 1
chr16:28835163|28835399 hsa-miR-554 0 1 0
chr16:28835163|28835399 hsa-miR-596 1 0 0
chr16:28835163|28835399 hsa-miR-661 1 0 0
chr16:28835163|28835399 hsa-miR-1248 1 0 0
chr16:28835163|28835399 hsa-miR-1539 1 0 0
chr16:28835163|28835399 hsa-miR-1913 1 0 0
chr16:28835163|28835399 hsa-miR-4252 0 1 0
chr16:28835163|28835399 hsa-miR-3943 1 1 0
chr16:28835163|28835399 hsa-miR-378g 0 1 0
chr16:28835163|28835399 hsa-miR-4469 1 1 0
chr16:28835163|28835399 hsa-miR-3972 0 1 0
chr16:28835163|28835399 hsa-miR-4675 0 1 0
chr16:28835163|28835399 hsa-miR-4682 1 0 0
chr16:28835163|28835399 hsa-miR-5691 0 1 0
chr16:28835163|28835399 hsa-miR-7974 0 1 0
chr16:28835163|28835399 hsa-miR-7978 0 1 0
chr16:28835163|28835399 hsa-miR-103a-2-5p 1 0 0
chr16:28835163|28835399 hsa-miR-6749-3p 1 0 0
chr16:28835163|28835399 hsa-miR-1233-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6892-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6881-3p 1 0 0
chr16:28835163|28835399 hsa-miR-150-5p 1 0 0
chr16:28835163|28835399 hsa-miR-191-3p 1 0 0
chr16:28835163|28835399 hsa-miR-7110-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6832-3p 1 0 0
chr16:28835163|28835399 hsa-miR-877-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6868-3p 1 0 0
chr16:28835163|28835399 hsa-miR-4753-3p 1 0 0
chr16:28835163|28835399 hsa-miR-3194-5p 0 1 0
chr16:28835163|28835399 hsa-miR-6728-3p 0 1 0
chr16:28835163|28835399 hsa-miR-6735-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6882-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6858-3p 0 1 0
chr16:28835163|28835399 hsa-miR-4713-5p 1 0 0
chr16:28835163|28835399 hsa-miR-615-3p 1 0 0
chr16:28835163|28835399 hsa-miR-939-3p 1 0 0
chr16:28835163|28835399 hsa-miR-4763-5p 1 0 0
chr16:28835163|28835399 hsa-miR-4707-3p 1 0 0
chr16:28835163|28835399 hsa-miR-4786-3p 0 1 0
chr16:28835163|28835399 hsa-miR-1908-3p 0 1 0
chr16:28835163|28835399 hsa-miR-6894-3p 1 0 0
chr16:28835163|28835399 hsa-miR-5001-3p 1 0 0
chr16:28835163|28835399 hsa-miR-7113-3p 1 0 0
chr16:28835163|28835399 hsa-miR-7111-3p 1 0 0
chr16:28835163|28835399 hsa-miR-4667-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6736-3p 0 1 0
chr16:28835163|28835399 hsa-miR-4640-3p 1 0 0
chr16:28835163|28835399 hsa-miR-7156-3p 0 1 0
chr16:28835163|28835399 hsa-miR-211-5p 1 0 0
chr16:28835163|28835399 hsa-miR-6743-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6811-3p 1 0 0
chr16:28835163|28835399 hsa-miR-4687-5p 1 0 0
chr16:28835163|28835399 hsa-miR-6828-3p 0 1 0
chr16:28835163|28835399 hsa-miR-24-1-5p 0 1 0
chr16:28835163|28835399 hsa-miR-4778-3p 1 0 0
chr16:28835163|28835399 hsa-miR-1238-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6867-3p 1 1 0
chr16:28835163|28835399 hsa-miR-6793-3p 1 0 0
chr16:28835163|28835399 hsa-miR-1910-5p 1 1 0
chr16:28835163|28835399 hsa-miR-2276-5p 1 0 0
chr16:28835163|28835399 hsa-miR-6752-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6814-5p 1 0 0
chr16:28835163|28835399 hsa-miR-6872-3p 1 1 0
chr16:28835163|28835399 hsa-miR-3074-5p 1 1 0
chr16:28835163|28835399 hsa-miR-6865-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6826-3p 1 0 0
chr16:28835163|28835399 hsa-miR-1914-5p 1 1 0
chr16:28835163|28835399 hsa-miR-5591-3p 1 0 0
chr16:28835163|28835399 hsa-miR-5088-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6859-3p 1 0 0
chr16:28835163|28835399 hsa-miR-204-5p 1 0 0
chr16:28835163|28835399 hsa-miR-130b-5p 1 1 0
chr16:28835163|28835399 hsa-miR-4750-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6798-3p 1 1 0
chr16:28835163|28835399 hsa-miR-6838-3p 0 1 0
chr16:28835163|28835399 hsa-miR-642a-5p 0 1 0
chr16:28835163|28835399 hsa-miR-3162-3p 1 0 0
chr16:28835163|28835399 hsa-miR-1228-3p 1 0 0
chr16:28835163|28835399 hsa-miR-5581-3p 0 1 0
chr16:28835163|28835399 hsa-miR-299-5p 1 0 0
chr16:28835163|28835399 hsa-miR-3127-3p 1 0 0
chr16:28835163|28835399 hsa-miR-320a-5p 1 0 0
chr16:28835163|28835399 hsa-miR-4685-3p 1 0 0
chr16:28835163|28835399 hsa-miR-1271-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6893-3p 0 1 0
chr16:28835163|28835399 hsa-miR-6805-3p 1 1 0
chr16:28835163|28835399 hsa-miR-10392-3p 0 1 0
chr16:28835163|28835399 hsa-miR-3059-5p 1 0 0
chr16:28835163|28835399 hsa-miR-6783-3p 1 0 0
chr16:28835163|28835399 hsa-miR-6781-3p 1 0 0
chr16:28835163|28835399 hsa-miR-103a-1-5p 1 0 0
chr16:28835163|28835399 hsa-miR-6843-3p 0 1 0
chr16:28835163|28835399 hsa-miR-130a-5p 1 0 0
chr16:28835163|28835399 hsa-miR-3064-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:28835163|28835399
ORF Type ORF1
Protein Length 79
Nucleotide Length 237
Protein Sequence LDRTGGRMLGLRLASSRRGSRLRLVGMELCGMVWVGLVNSGCSRKEGEPVLSTPEGAGTQPRAEGPGAGLTIKGLGGRL
Nucleotide Sequence CTGGACAGGACTGGGGGCCGCATGCTGGGACTGCGGCTGGCTTCCAGTAGGCGTGGTAGCCGGCTGCGGCTGGTGGGCATGGAGCTGTGTGGCATGGTGTGGGTAGGACTGGTGAACAGTGGCTGCAGCAGGAAAGAGGGAGAACCAGTGCTGAGCACACCAGAGGGGGCTGGCACACAGCCCAGAGCAGAGGGACCAGGCGCAGGACTCACCATAAAGGGCTTGGGGGGTAGGCTG

CircID chr16:28835163|28835399
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MGAACWDCGWLPVGVVAGCGWWAWSCVAWCG
Nucleotide Sequence CTGGGGGCCGCATGCTGGGACTGCGGCTGGCTTCCAGTAGGCGTGGTAGCCGGCTGCGGCTGGTGGGCATGGAGCTGTGTGGCATGGTGTGGGTAG

CircID chr16:28835163|28835399
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MQQERGRTSAEHTRGGWHTAQSRGTRRRTHHKGLGG
Nucleotide Sequence CTGCAGCAGGAAAGAGGGAGAACCAGTGCTGAGCACACCAGAGGGGGCTGGCACACAGCCCAGAGCAGAGGGACCAGGCGCAGGACTCACCATAAAGGGCTTGGGGGGTAG

CircID chr16:28835163|28835399
ORF Type ORF4
Protein Length 60
Nucleotide Length 180
Protein Sequence MCASPLWCAQHWFSLFPAAATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQ
Nucleotide Sequence CTGTGTGCCAGCCCCCTCTGGTGTGCTCAGCACTGGTTCTCCCTCTTTCCTGCTGCAGCCACTGTTCACCAGTCCTACCCACACCATGCCACACAGCTCCATGCCCACCAGCCGCAGCCGGCTACCACGCCTACTGGAAGCCAGCCGCAGTCCCAGCATGCGGCCCCCAGTCCTGTCCAG

CircID chr16:28835163|28835399
ORF Type ORF5
Protein Length 71
Nucleotide Length 213
Protein Sequence MVSPAPGPSALGCVPAPSGVLSTGSPSFLLQPLFTSPTHTMPHSSMPTSRSRLPRLLEASRSPSMRPPVLS
Nucleotide Sequence ATGGTGAGTCCTGCGCCTGGTCCCTCTGCTCTGGGCTGTGTGCCAGCCCCCTCTGGTGTGCTCAGCACTGGTTCTCCCTCTTTCCTGCTGCAGCCACTGTTCACCAGTCCTACCCACACCATGCCACACAGCTCCATGCCCACCAGCCGCAGCCGGCTACCACGCCTACTGGAAGCCAGCCGCAGTCCCAGCATGCGGCCCCCAGTCCTGTCC

CircID chr16:28835163|28835399
ORF Type ORF6
Protein Length 68
Nucleotide Length 204
Protein Sequence MRLVPLLWAVCQPPLVCSALVLPLSCCSHCSPVLPTPCHTAPCPPAAAGYHAYWKPAAVPACGPQSCP
Nucleotide Sequence CTGCGCCTGGTCCCTCTGCTCTGGGCTGTGTGCCAGCCCCCTCTGGTGTGCTCAGCACTGGTTCTCCCTCTTTCCTGCTGCAGCCACTGTTCACCAGTCCTACCCACACCATGCCACACAGCTCCATGCCCACCAGCCGCAGCCGGCTACCACGCCTACTGGAAGCCAGCCGCAGTCCCAGCATGCGGCCCCCAGTCCTGTCCA

CircID chr16:28835163|28835399
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence LDRTGGRMLGLRLASSRRGSRLRLVGMELCGMVWVGLVNSGIKGLGGRL
Nucleotide Sequence CTGGACAGGACTGGGGGCCGCATGCTGGGACTGCGGCTGGCTTCCAGTAGGCGTGGTAGCCGGCTGCGGCTGGTGGGCATGGAGCTGTGTGGCATGGTGTGGGTAGGACTGGTGAACAGTGGCATAAAGGGCTTGGGGGGTAGGCTG

CircID chr16:28835163|28835399
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MPLFTSPTHTMPHSSMPTSRSRLPRLLEASRSPSMRPPVLS
Nucleotide Sequence ATGCCACTGTTCACCAGTCCTACCCACACCATGCCACACAGCTCCATGCCCACCAGCCGCAGCCGGCTACCACGCCTACTGGAAGCCAGCCGCAGTCCCAGCATGCGGCCCCCAGTCCTGTCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites