CircRNA Information

General Information
circRNA Basic Information
CircID chr16:28873527|28873721
Strand +
CircType exon
Host Gene ENSG00000178188.13;
Algorism CIRI2;
Sequence CCCCGCGTCCCCACCAGACCCAGCGCCCTGGGCCTCTGAGCCTGGGGCTATGGCCTCTTCCAATTCAACCACGGGGACCAGCTCAACCACGGGGACCAGCTCTTCCGGGACCCCTCCACCGCCCGCTTTCTCTTTCTCTTGCCTCTCTTTGGCTGCTGCGGCTGCTGCTGCCGCCACTTCTGGCGCCCTCGACGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:28873527|28873721 hsa-miR-15a-5p 0 0 1
chr16:28873527|28873721 hsa-miR-15a-3p 0 0 1
chr16:28873527|28873721 hsa-miR-31-5p 0 0 1
chr16:28873527|28873721 hsa-miR-31-3p 0 0 1
chr16:28873527|28873721 hsa-miR-15b-5p 0 0 1
chr16:28873527|28873721 hsa-miR-15b-3p 0 0 1
chr16:28873527|28873721 hsa-miR-195-5p 0 0 1
chr16:28873527|28873721 hsa-miR-195-3p 0 0 1
chr16:28873527|28873721 hsa-miR-424-5p 0 0 1
chr16:28873527|28873721 hsa-miR-424-3p 0 0 1
chr16:28873527|28873721 hsa-miR-484 0 1 1
chr16:28873527|28873721 hsa-miR-497-5p 0 0 1
chr16:28873527|28873721 hsa-miR-497-3p 0 0 1
chr16:28873527|28873721 hsa-miR-558 0 0 1
chr16:28873527|28873721 hsa-miR-563 0 0 1
chr16:28873527|28873721 hsa-miR-541-5p 0 0 1
chr16:28873527|28873721 hsa-miR-541-3p 0 0 1
chr16:28873527|28873721 hsa-miR-491-5p 0 0 1
chr16:28873527|28873721 hsa-miR-615-5p 1 1 1
chr16:28873527|28873721 hsa-miR-193a-5p 0 0 1
chr16:28873527|28873721 hsa-miR-654-5p 0 0 1
chr16:28873527|28873721 hsa-miR-16 0 0 1
chr16:28873527|28873721 hsa-miR-7 0 0 1
chr16:28873527|28873721 hsa-miR-219-2-3p 0 0 1
chr16:28873527|28873721 hsa-miR-24 0 0 1
chr16:28873527|28873721 hsa-miR-608 1 0 0
chr16:28873527|28873721 hsa-miR-658 1 0 0
chr16:28873527|28873721 hsa-miR-762 1 0 0
chr16:28873527|28873721 hsa-miR-760 1 0 0
chr16:28873527|28873721 hsa-miR-3125 1 0 0
chr16:28873527|28873721 hsa-miR-3137 1 0 0
chr16:28873527|28873721 hsa-miR-3197 1 0 0
chr16:28873527|28873721 hsa-miR-4281 1 1 0
chr16:28873527|28873721 hsa-miR-3612 1 0 0
chr16:28873527|28873721 hsa-miR-3651 0 1 0
chr16:28873527|28873721 hsa-miR-3916 1 1 0
chr16:28873527|28873721 hsa-miR-1268b 1 0 0
chr16:28873527|28873721 hsa-miR-4428 1 0 0
chr16:28873527|28873721 hsa-miR-4487 0 1 0
chr16:28873527|28873721 hsa-miR-1587 1 0 0
chr16:28873527|28873721 hsa-miR-3960 1 0 0
chr16:28873527|28873721 hsa-miR-4688 1 0 0
chr16:28873527|28873721 hsa-miR-4721 1 0 0
chr16:28873527|28873721 hsa-miR-4739 1 0 0
chr16:28873527|28873721 hsa-miR-4767 1 0 0
chr16:28873527|28873721 hsa-miR-5194 1 1 0
chr16:28873527|28873721 hsa-miR-6077 0 1 0
chr16:28873527|28873721 hsa-miR-6131 0 1 0
chr16:28873527|28873721 hsa-miR-6133 1 0 0
chr16:28873527|28873721 hsa-miR-6165 1 0 0
chr16:28873527|28873721 hsa-miR-9901 1 0 0
chr16:28873527|28873721 hsa-miR-12122 1 0 0
chr16:28873527|28873721 hsa-miR-6809-5p 1 0 0
chr16:28873527|28873721 hsa-miR-4433a-3p 0 1 0
chr16:28873527|28873721 hsa-miR-7106-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6799-5p 1 0 0
chr16:28873527|28873721 hsa-miR-8071 1 0 0
chr16:28873527|28873721 hsa-miR-6804-5p 1 1 0
chr16:28873527|28873721 hsa-miR-3926 1 0 0
chr16:28873527|28873721 hsa-miR-6515-5p 0 1 0
chr16:28873527|28873721 hsa-miR-6089 1 0 0
chr16:28873527|28873721 hsa-miR-7847-3p 1 1 0
chr16:28873527|28873721 hsa-miR-4695-5p 1 0 0
chr16:28873527|28873721 hsa-miR-4722-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6842-3p 1 0 0
chr16:28873527|28873721 hsa-miR-7845-5p 1 0 0
chr16:28873527|28873721 hsa-miR-3663-5p 1 1 0
chr16:28873527|28873721 hsa-miR-185-3p 1 0 0
chr16:28873527|28873721 hsa-miR-6732-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6805-5p 1 0 0
chr16:28873527|28873721 hsa-miR-2467-3p 1 0 0
chr16:28873527|28873721 hsa-miR-6874-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6821-5p 1 0 0
chr16:28873527|28873721 hsa-miR-5008-5p 0 1 0
chr16:28873527|28873721 hsa-miR-6786-5p 1 1 0
chr16:28873527|28873721 hsa-miR-4738-3p 1 0 0
chr16:28873527|28873721 hsa-miR-6763-3p 1 0 0
chr16:28873527|28873721 hsa-miR-3944-3p 1 0 0
chr16:28873527|28873721 hsa-miR-4640-5p 1 0 0
chr16:28873527|28873721 hsa-miR-1228-5p 1 0 0
chr16:28873527|28873721 hsa-miR-149-3p 1 0 0
chr16:28873527|28873721 hsa-miR-3925-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6828-5p 1 0 0
chr16:28873527|28873721 hsa-miR-103b 0 1 0
chr16:28873527|28873721 hsa-miR-423-5p 1 1 0
chr16:28873527|28873721 hsa-miR-7152-3p 0 1 0
chr16:28873527|28873721 hsa-miR-4750-5p 1 0 0
chr16:28873527|28873721 hsa-miR-214-3p 1 1 0
chr16:28873527|28873721 hsa-miR-4444 1 0 0
chr16:28873527|28873721 hsa-miR-10400-5p 1 0 0
chr16:28873527|28873721 hsa-miR-4763-3p 1 0 0
chr16:28873527|28873721 hsa-miR-6769b-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6778-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6787-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6893-5p 1 0 0
chr16:28873527|28873721 hsa-miR-5001-5p 1 1 0
chr16:28873527|28873721 hsa-miR-6737-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6743-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6754-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6756-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6815-5p 0 1 0
chr16:28873527|28873721 hsa-miR-1249-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6797-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6808-5p 1 0 0
chr16:28873527|28873721 hsa-miR-1915-3p 1 1 0
chr16:28873527|28873721 hsa-miR-3620-5p 1 0 0
chr16:28873527|28873721 hsa-miR-5196-5p 1 0 0
chr16:28873527|28873721 hsa-miR-10526-3p 1 0 0
chr16:28873527|28873721 hsa-miR-1237-5p 1 0 0
chr16:28873527|28873721 hsa-miR-4685-5p 1 1 0
chr16:28873527|28873721 hsa-miR-4726-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6738-5p 1 1 0
chr16:28873527|28873721 hsa-miR-6831-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6845-5p 1 0 0
chr16:28873527|28873721 hsa-miR-939-5p 1 0 0
chr16:28873527|28873721 hsa-miR-1238-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6731-5p 1 0 0
chr16:28873527|28873721 hsa-miR-6739-5p 1 1 0
chr16:28873527|28873721 hsa-miR-6758-5p 0 1 0
chr16:28873527|28873721 hsa-miR-6856-5p 1 0 0
chr16:28873527|28873721 hsa-miR-1914-3p 1 1 0
chr16:28873527|28873721 hsa-miR-10398-3p 1 0 0
chr16:28873527|28873721 hsa-miR-6775-3p 1 0 0
chr16:28873527|28873721 hsa-miR-6764-5p 0 1 0
chr16:28873527|28873721 hsa-miR-6838-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:28873527|28873721
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MASSNSTTGTSSTTGTSSSGTPPPPAFSFSCLSLAAAAAAAATSGALD
Nucleotide Sequence ATGGCCTCTTCCAATTCAACCACGGGGACCAGCTCAACCACGGGGACCAGCTCTTCCGGGACCCCTCCACCGCCCGCTTTCTCTTTCTCTTGCCTCTCTTTGGCTGCTGCGGCTGCTGCTGCCGCCACTTCTGGCGCCCTCGAC
CircID chr16:28873527|28873721
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MSLGLWPLPIQPRGPAQPRGPALPGPLHRPLSLSLASLWLLRLLLPPLLAPST
Nucleotide Sequence CTGAGCCTGGGGCTATGGCCTCTTCCAATTCAACCACGGGGACCAGCTCAACCACGGGGACCAGCTCTTCCGGGACCCCTCCACCGCCCGCTTTCTCTTTCTCTTGCCTCTCTTTGGCTGCTGCGGCTGCTGCTGCCGCCACTTCTGGCGCCCTCGACG
CircID chr16:28873527|28873721
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MVPVVELVPVVELEEAIAPGSEAQGAGSGGDAG
Nucleotide Sequence CTGGTCCCCGTGGTTGAGCTGGTCCCCGTGGTTGAATTGGAAGAGGCCATAGCCCCAGGCTCAGAGGCCCAGGGCGCTGGGTCTGGTGGGGACGCGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab