CircRNA Information

General Information
circRNA Basic Information
CircID chr16:28974975|28975159
Strand +
CircType exon
Host Gene ENSG00000260367.2;
Algorism CIRI2;
Sequence CCGGCCATGGTCCCGGGGGGCCGCGCCCGCCCGCGCTCCGGTCCCACCGACGATCCCACCTGCGAGGGGAGGAGGCTGGAGAAAGGAGGATGGACCGAACACAGGCGAGGGAAGTGCGCCCGGAGACGGGGAGCTTGCCCTGAAGCACAGAGCACCACTGAGAAGGGACCCGGGCCCTGTCACGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:28974975|28975159 hsa-miR-591 0 0 1
chr16:28974975|28975159 hsa-miR-636 0 0 1
chr16:28974975|28975159 hsa-miR-638 1 1 1
chr16:28974975|28975159 hsa-miR-766-5p 0 0 1
chr16:28974975|28975159 hsa-miR-766-3p 0 0 1
chr16:28974975|28975159 hsa-miR-1203 0 0 1
chr16:28974975|28975159 hsa-miR-769-3p 0 1 1
chr16:28974975|28975159 hsa-miR-450b-3p 0 0 1
chr16:28974975|28975159 hsa-miR-515-5p 0 0 1
chr16:28974975|28975159 hsa-miR-542-3p 0 0 1
chr16:28974975|28975159 hsa-miR-642 0 0 1
chr16:28974975|28975159 hsa-miR-218 0 0 1
chr16:28974975|28975159 hsa-miR-623 1 0 0
chr16:28974975|28975159 hsa-miR-661 1 0 0
chr16:28974975|28975159 hsa-miR-663a 1 1 0
chr16:28974975|28975159 hsa-miR-762 1 0 0
chr16:28974975|28975159 hsa-miR-940 1 0 0
chr16:28974975|28975159 hsa-miR-1248 1 1 0
chr16:28974975|28975159 hsa-miR-1281 0 1 0
chr16:28974975|28975159 hsa-miR-1469 1 0 0
chr16:28974975|28975159 hsa-miR-1538 1 1 0
chr16:28974975|28975159 hsa-miR-2861 1 0 0
chr16:28974975|28975159 hsa-miR-3178 0 1 0
chr16:28974975|28975159 hsa-miR-4268 0 1 0
chr16:28974975|28975159 hsa-miR-4479 0 1 0
chr16:28974975|28975159 hsa-miR-3977 0 1 0
chr16:28974975|28975159 hsa-miR-4654 0 1 0
chr16:28974975|28975159 hsa-miR-4767 1 1 0
chr16:28974975|28975159 hsa-miR-5193 0 1 0
chr16:28974975|28975159 hsa-miR-5691 0 1 0
chr16:28974975|28975159 hsa-miR-6132 1 0 0
chr16:28974975|28975159 hsa-miR-8073 1 0 0
chr16:28974975|28975159 hsa-miR-22-5p 0 1 0
chr16:28974975|28975159 hsa-miR-6749-3p 0 1 0
chr16:28974975|28975159 hsa-miR-4747-3p 1 0 0
chr16:28974975|28975159 hsa-miR-1247-3p 0 1 0
chr16:28974975|28975159 hsa-miR-6089 1 0 0
chr16:28974975|28975159 hsa-miR-6840-5p 0 1 0
chr16:28974975|28975159 hsa-miR-6727-5p 1 0 0
chr16:28974975|28975159 hsa-miR-6849-3p 0 1 0
chr16:28974975|28975159 hsa-miR-1915-5p 1 0 0
chr16:28974975|28975159 hsa-miR-4655-3p 1 0 0
chr16:28974975|28975159 hsa-miR-6735-3p 1 0 0
chr16:28974975|28975159 hsa-miR-615-5p 1 0 0
chr16:28974975|28975159 hsa-miR-6786-5p 1 1 0
chr16:28974975|28975159 hsa-miR-939-3p 1 0 0
chr16:28974975|28975159 hsa-miR-6763-3p 1 0 0
chr16:28974975|28975159 hsa-miR-4640-5p 1 0 0
chr16:28974975|28975159 hsa-miR-6803-3p 1 1 0
chr16:28974975|28975159 hsa-miR-6514-3p 1 0 0
chr16:28974975|28975159 hsa-miR-3191-5p 0 1 0
chr16:28974975|28975159 hsa-miR-6749-5p 1 0 0
chr16:28974975|28975159 hsa-miR-7111-3p 1 1 0
chr16:28974975|28975159 hsa-miR-5196-3p 0 1 0
chr16:28974975|28975159 hsa-miR-7160-3p 1 1 0
chr16:28974975|28975159 hsa-miR-6811-3p 1 1 0
chr16:28974975|28975159 hsa-miR-6499-5p 0 1 0
chr16:28974975|28975159 hsa-miR-1296-5p 1 1 0
chr16:28974975|28975159 hsa-miR-1914-5p 1 0 0
chr16:28974975|28975159 hsa-miR-5088-3p 0 1 0
chr16:28974975|28975159 hsa-miR-2277-5p 1 1 0
chr16:28974975|28975159 hsa-miR-1207-5p 1 0 0
chr16:28974975|28975159 hsa-miR-4763-3p 1 0 0
chr16:28974975|28975159 hsa-miR-6756-5p 1 1 0
chr16:28974975|28975159 hsa-miR-6813-5p 1 0 0
chr16:28974975|28975159 hsa-miR-6779-5p 1 0 0
chr16:28974975|28975159 hsa-miR-6836-5p 1 0 0
chr16:28974975|28975159 hsa-miR-1909-3p 1 0 0
chr16:28974975|28975159 hsa-miR-4745-3p 0 1 0
chr16:28974975|28975159 hsa-miR-4769-5p 0 1 0
chr16:28974975|28975159 hsa-miR-10394-3p 0 1 0
chr16:28974975|28975159 hsa-miR-5008-3p 0 1 0
chr16:28974975|28975159 hsa-miR-6791-3p 0 1 0
chr16:28974975|28975159 hsa-miR-6724-5p 1 0 0
chr16:28974975|28975159 hsa-miR-10398-5p 1 0 0
chr16:28974975|28975159 hsa-miR-6829-3p 0 1 0
chr16:28974975|28975159 hsa-miR-6512-3p 1 1 0
chr16:28974975|28975159 hsa-miR-6781-3p 0 1 0
chr16:28974975|28975159 hsa-miR-6737-3p 0 1 0
chr16:28974975|28975159 hsa-miR-412-3p 1 0 0
chr16:28974975|28975159 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:28974975|28975159
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MVPGGRARPRSGPTDDPTCEGRRLEKGGWTEHRRGKCARRRGACPEAQSTTEKGPGPCH
Nucleotide Sequence ATGGTCCCGGGGGGCCGCGCCCGCCCGCGCTCCGGTCCCACCGACGATCCCACCTGCGAGGGGAGGAGGCTGGAGAAAGGAGGATGGACCGAACACAGGCGAGGGAAGTGCGCCCGGAGACGGGGAGCTTGCCCTGAAGCACAGAGCACCACTGAGAAGGGACCCGGGCCCTGTCAC

CircID chr16:28974975|28975159
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MRGEEAGERRMDRTQAREVRPETGSLP
Nucleotide Sequence CTGCGAGGGGAGGAGGCTGGAGAAAGGAGGATGGACCGAACACAGGCGAGGGAAGTGCGCCCGGAGACGGGGAGCTTGCCCTGA

CircID chr16:28974975|28975159
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MCSVHPPFSSLLPSQVGSSVGPERGRARPPGTMA
Nucleotide Sequence CTGTGTTCGGTCCATCCTCCTTTCTCCAGCCTCCTCCCCTCGCAGGTGGGATCGTCGGTGGGACCGGAGCGCGGGCGGGCGCGGCCCCCCGGGACCATGGCC

CircID chr16:28974975|28975159
ORF Type ORF4
Protein Length 50
Nucleotide Length 150
Protein Sequence MCFRASSPSPGALPSPVFGPSSFLQPPPLAGGIVGGTGARAGAAPRDHGR
Nucleotide Sequence CTGTGCTTCAGGGCAAGCTCCCCGTCTCCGGGCGCACTTCCCTCGCCTGTGTTCGGTCCATCCTCCTTTCTCCAGCCTCCTCCCCTCGCAGGTGGGATCGTCGGTGGGACCGGAGCGCGGGCGGGCGCGGCCCCCCGGGACCATGGCCGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites