CircRNA Information

General Information
circRNA Basic Information
CircID chr16:29810356|29810715
Strand +
CircType exon
Host Gene ENSG00000103495.12;
Algorism CIRI2;
Sequence AGCTCTGATCCCCCTCCTTCCTCTCCTCCCTCCCCCTGGAAAAAAAAAAAAAAGGAAAAGAAAGCACCAACTCCCCGGGGAGGGGCTGCAGACAGCAGGGGGAGAGGACTGGAAGGAGAGAAGAGGACCGTCGAGGGAAGAGGCTCACAAGTCCCTGGGAAGACAGGGCATGGGCTTACAGAGAGGAGAGGGGGTACGGGCAGTGGCTGCTCGTGTCCTCTGCCACCCCTGCCCACTGTCCAGGGGACTTCAACACAACCGAGGGGACAGGTTTGTGTGGGGTCAGGTCTGACAGAAGAGGAGCAGGAGAAACAAATCGTTAAAACCTAGCGAATTCCCCTAAGAAAACATTTCTTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:29810356|29810715 hsa-miR-370-5p 0 0 1
chr16:29810356|29810715 hsa-miR-370-3p 0 0 1
chr16:29810356|29810715 hsa-miR-383-5p 0 0 1
chr16:29810356|29810715 hsa-miR-383-3p 0 0 1
chr16:29810356|29810715 hsa-miR-346 0 0 1
chr16:29810356|29810715 hsa-miR-571 0 0 1
chr16:29810356|29810715 hsa-miR-573 0 0 1
chr16:29810356|29810715 hsa-miR-608 0 1 1
chr16:29810356|29810715 hsa-miR-626 0 0 1
chr16:29810356|29810715 hsa-miR-632 0 0 1
chr16:29810356|29810715 hsa-miR-649 0 0 1
chr16:29810356|29810715 hsa-miR-653-5p 0 0 1
chr16:29810356|29810715 hsa-miR-653-3p 0 0 1
chr16:29810356|29810715 hsa-miR-765 1 1 1
chr16:29810356|29810715 hsa-miR-874-5p 0 0 1
chr16:29810356|29810715 hsa-miR-874-3p 0 0 1
chr16:29810356|29810715 hsa-miR-942-5p 0 0 1
chr16:29810356|29810715 hsa-miR-942-3p 0 0 1
chr16:29810356|29810715 hsa-miR-1236-5p 0 0 1
chr16:29810356|29810715 hsa-miR-1236-3p 0 0 1
chr16:29810356|29810715 hsa-miR-1205 0 0 1
chr16:29810356|29810715 hsa-miR-1321 0 0 1
chr16:29810356|29810715 hsa-miR-1197 0 0 1
chr16:29810356|29810715 hsa-miR-145-5p 0 0 1
chr16:29810356|29810715 hsa-miR-146b-3p 0 0 1
chr16:29810356|29810715 hsa-miR-339-5p 0 0 1
chr16:29810356|29810715 hsa-miR-1184 0 1 1
chr16:29810356|29810715 hsa-miR-331-3p 0 0 1
chr16:29810356|29810715 hsa-miR-1207-5p 0 1 1
chr16:29810356|29810715 hsa-miR-642 0 0 1
chr16:29810356|29810715 hsa-miR-602 0 1 0
chr16:29810356|29810715 hsa-miR-1976 1 1 0
chr16:29810356|29810715 hsa-miR-3125 0 1 0
chr16:29810356|29810715 hsa-miR-3138 0 1 0
chr16:29810356|29810715 hsa-miR-3183 0 1 0
chr16:29810356|29810715 hsa-miR-4259 1 0 0
chr16:29810356|29810715 hsa-miR-4268 0 1 0
chr16:29810356|29810715 hsa-miR-4271 1 0 0
chr16:29810356|29810715 hsa-miR-4274 1 0 0
chr16:29810356|29810715 hsa-miR-4287 1 0 0
chr16:29810356|29810715 hsa-miR-3907 1 0 0
chr16:29810356|29810715 hsa-miR-3909 1 1 0
chr16:29810356|29810715 hsa-miR-3916 0 1 0
chr16:29810356|29810715 hsa-miR-4476 1 1 0
chr16:29810356|29810715 hsa-miR-4510 0 1 0
chr16:29810356|29810715 hsa-miR-4533 0 1 0
chr16:29810356|29810715 hsa-miR-4534 1 0 0
chr16:29810356|29810715 hsa-miR-4641 1 1 0
chr16:29810356|29810715 hsa-miR-4651 0 1 0
chr16:29810356|29810715 hsa-miR-4689 1 0 0
chr16:29810356|29810715 hsa-miR-4706 1 0 0
chr16:29810356|29810715 hsa-miR-4739 1 1 0
chr16:29810356|29810715 hsa-miR-4780 1 0 0
chr16:29810356|29810715 hsa-miR-5193 1 0 0
chr16:29810356|29810715 hsa-miR-6088 1 0 0
chr16:29810356|29810715 hsa-miR-6127 1 1 0
chr16:29810356|29810715 hsa-miR-6133 1 1 0
chr16:29810356|29810715 hsa-miR-6860 0 1 0
chr16:29810356|29810715 hsa-miR-12118 1 0 0
chr16:29810356|29810715 hsa-miR-4433b-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6734-5p 1 0 0
chr16:29810356|29810715 hsa-miR-7106-5p 1 1 0
chr16:29810356|29810715 hsa-miR-6825-5p 1 1 0
chr16:29810356|29810715 hsa-miR-6894-5p 1 0 0
chr16:29810356|29810715 hsa-miR-6881-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6510-5p 0 1 0
chr16:29810356|29810715 hsa-miR-7847-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6741-5p 1 0 0
chr16:29810356|29810715 hsa-miR-6721-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6873-3p 1 1 0
chr16:29810356|29810715 hsa-miR-7110-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6817-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6845-3p 1 1 0
chr16:29810356|29810715 hsa-miR-877-3p 1 1 0
chr16:29810356|29810715 hsa-miR-4655-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6798-5p 0 1 0
chr16:29810356|29810715 hsa-miR-2467-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6782-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6728-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6740-3p 1 1 0
chr16:29810356|29810715 hsa-miR-4436b-5p 1 0 0
chr16:29810356|29810715 hsa-miR-7109-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6772-3p 0 1 0
chr16:29810356|29810715 hsa-miR-1229-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6803-3p 1 0 0
chr16:29810356|29810715 hsa-miR-4691-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6514-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6847-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6861-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6878-3p 1 0 0
chr16:29810356|29810715 hsa-miR-4743-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6809-3p 1 1 0
chr16:29810356|29810715 hsa-miR-7111-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6780a-3p 1 0 0
chr16:29810356|29810715 hsa-miR-4787-5p 0 1 0
chr16:29810356|29810715 hsa-miR-149-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6824-5p 1 1 0
chr16:29810356|29810715 hsa-miR-3162-5p 0 1 0
chr16:29810356|29810715 hsa-miR-4640-3p 0 1 0
chr16:29810356|29810715 hsa-miR-7156-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6769a-3p 0 1 0
chr16:29810356|29810715 hsa-miR-5010-5p 0 1 0
chr16:29810356|29810715 hsa-miR-4646-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6870-3p 1 0 0
chr16:29810356|29810715 hsa-miR-3120-5p 0 1 0
chr16:29810356|29810715 hsa-miR-1238-3p 1 0 0
chr16:29810356|29810715 hsa-miR-4727-3p 0 1 0
chr16:29810356|29810715 hsa-miR-1910-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6741-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6872-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6826-3p 0 1 0
chr16:29810356|29810715 hsa-miR-328-3p 1 0 0
chr16:29810356|29810715 hsa-miR-5004-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6798-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6734-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6515-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6847-3p 0 1 0
chr16:29810356|29810715 hsa-miR-5587-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6780b-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6890-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6731-3p 1 0 0
chr16:29810356|29810715 hsa-miR-4763-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6865-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6870-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6756-5p 1 0 0
chr16:29810356|29810715 hsa-miR-11181-3p 0 1 0
chr16:29810356|29810715 hsa-miR-1249-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6722-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6763-5p 1 0 0
chr16:29810356|29810715 hsa-miR-6797-5p 1 1 0
chr16:29810356|29810715 hsa-miR-7111-5p 0 1 0
chr16:29810356|29810715 hsa-miR-3127-3p 1 0 0
chr16:29810356|29810715 hsa-miR-320a-5p 1 1 0
chr16:29810356|29810715 hsa-miR-6852-3p 0 1 0
chr16:29810356|29810715 hsa-miR-4728-5p 0 1 0
chr16:29810356|29810715 hsa-miR-5196-5p 1 0 0
chr16:29810356|29810715 hsa-miR-4649-5p 1 0 0
chr16:29810356|29810715 hsa-miR-4685-5p 1 0 0
chr16:29810356|29810715 hsa-miR-6738-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6794-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6795-5p 1 1 0
chr16:29810356|29810715 hsa-miR-6858-5p 1 0 0
chr16:29810356|29810715 hsa-miR-6887-5p 1 1 0
chr16:29810356|29810715 hsa-miR-6889-5p 0 1 0
chr16:29810356|29810715 hsa-miR-3187-5p 0 1 0
chr16:29810356|29810715 hsa-miR-4723-5p 0 1 0
chr16:29810356|29810715 hsa-miR-939-5p 1 0 0
chr16:29810356|29810715 hsa-miR-365a-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6877-3p 1 1 0
chr16:29810356|29810715 hsa-miR-4747-5p 1 0 0
chr16:29810356|29810715 hsa-miR-6876-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6891-5p 1 1 0
chr16:29810356|29810715 hsa-miR-4716-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6785-5p 0 1 0
chr16:29810356|29810715 hsa-miR-2682-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6791-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6893-3p 0 1 0
chr16:29810356|29810715 hsa-miR-10401-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6810-3p 0 1 0
chr16:29810356|29810715 hsa-miR-4723-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6751-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6769b-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6819-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6823-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6891-3p 1 0 0
chr16:29810356|29810715 hsa-miR-6859-5p 0 1 0
chr16:29810356|29810715 hsa-miR-4768-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6876-3p 0 1 0
chr16:29810356|29810715 hsa-miR-6781-3p 1 1 0
chr16:29810356|29810715 hsa-miR-6764-5p 0 1 0
chr16:29810356|29810715 hsa-miR-6833-3p 1 1 0
chr16:29810356|29810715 hsa-miR-5699-3p 0 1 0
chr16:29810356|29810715 hsa-miR-873-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:29810356|29810715
ORF Type ORF1
Protein Length 73
Nucleotide Length 222
Protein Sequence MEGEKRTVEGRGSQVPGKTGHGLTERRGGTGSGCSCPLPPLPTVQGTSTQPRGQVCVGSGLTEEEQEKQIVKT
Nucleotide Sequence CTGGAAGGAGAGAAGAGGACCGTCGAGGGAAGAGGCTCACAAGTCCCTGGGAAGACAGGGCATGGGCTTACAGAGAGGAGAGGGGGTACGGGCAGTGGCTGCTCGTGTCCTCTGCCACCCCTGCCCACTGTCCAGGGGACTTCAACACAACCGAGGGGACAGGTTTGTGTGGGGTCAGGTCTGACAGAAGAGGAGCAGGAGAAACAAATCGTTAAAACCTAG
CircID chr16:29810356|29810715
ORF Type ORF2
Protein Length 95
Nucleotide Length 288
Protein Sequence MIPLLPLLPPPGKKKKRKRKHQLPGEGLQTAGGEDWKERRGPSREEAHKSLGRQGMGLQRGEGVRAVAARVLCHPCPLSRGLQHNRGDRFVWGQV
Nucleotide Sequence CTGATCCCCCTCCTTCCTCTCCTCCCTCCCCCTGGAAAAAAAAAAAAAAGGAAAAGAAAGCACCAACTCCCCGGGGAGGGGCTGCAGACAGCAGGGGGAGAGGACTGGAAGGAGAGAAGAGGACCGTCGAGGGAAGAGGCTCACAAGTCCCTGGGAAGACAGGGCATGGGCTTACAGAGAGGAGAGGGGGTACGGGCAGTGGCTGCTCGTGTCCTCTGCCACCCCTGCCCACTGTCCAGGGGACTTCAACACAACCGAGGGGACAGGTTTGTGTGGGGTCAGGTCTGA
CircID chr16:29810356|29810715
ORF Type ORF3
Protein Length 95
Nucleotide Length 288
Protein Sequence MEKKKKGKESTNSPGRGCRQQGERTGRREEDRRGKRLTSPWEDRAWAYREERGYGQWLLVSSATPAHCPGDFNTTEGTGLCGVRSDRRGAGETNR
Nucleotide Sequence CTGGAAAAAAAAAAAAAAGGAAAAGAAAGCACCAACTCCCCGGGGAGGGGCTGCAGACAGCAGGGGGAGAGGACTGGAAGGAGAGAAGAGGACCGTCGAGGGAAGAGGCTCACAAGTCCCTGGGAAGACAGGGCATGGGCTTACAGAGAGGAGAGGGGGTACGGGCAGTGGCTGCTCGTGTCCTCTGCCACCCCTGCCCACTGTCCAGGGGACTTCAACACAACCGAGGGGACAGGTTTGTGTGGGGTCAGGTCTGACAGAAGAGGAGCAGGAGAAACAAATCGTTAA
CircID chr16:29810356|29810715
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MDSGQGWQRTRAATARTPSPLCKPMPCLPRDL
Nucleotide Sequence CTGGACAGTGGGCAGGGGTGGCAGAGGACACGAGCAGCCACTGCCCGTACCCCCTCTCCTCTCTGTAAGCCCATGCCCTGTCTTCCCAGGGACTTGTGA
CircID chr16:29810356|29810715
ORF Type ORF5
Protein Length 67
Nucleotide Length 201
Protein Sequence MPVPPLLSVSPCPVFPGTCEPLPSTVLFSPSSPLPLLSAAPPRGVGAFFSFFFFFQGEGGEEGGGSE
Nucleotide Sequence CTGCCCGTACCCCCTCTCCTCTCTGTAAGCCCATGCCCTGTCTTCCCAGGGACTTGTGAGCCTCTTCCCTCGACGGTCCTCTTCTCTCCTTCCAGTCCTCTCCCCCTGCTGTCTGCAGCCCCTCCCCGGGGAGTTGGTGCTTTCTTTTCCTTTTTTTTTTTTTTCCAGGGGGAGGGAGGAGAGGAAGGAGGGGGATCAGAG
CircID chr16:29810356|29810715
ORF Type ORF6
Protein Length 39
Nucleotide Length 120
Protein Sequence MSDLTPHKPVPSVVLKSPGQWAGVAEDTSSHCPYPLSSL
Nucleotide Sequence CTGTCAGACCTGACCCCACACAAACCTGTCCCCTCGGTTGTGTTGAAGTCCCCTGGACAGTGGGCAGGGGTGGCAGAGGACACGAGCAGCCACTGCCCGTACCCCCTCTCCTCTCTGTAA
CircID chr16:29810356|29810715
ORF Type ORF7
Protein Length 55
Nucleotide Length 165
Protein Sequence MSSQGLVSLFPRRSSSLLPVLSPCCLQPLPGELVLSFPFFFFSRGREERKEGDQS
Nucleotide Sequence CTGTCTTCCCAGGGACTTGTGAGCCTCTTCCCTCGACGGTCCTCTTCTCTCCTTCCAGTCCTCTCCCCCTGCTGTCTGCAGCCCCTCCCCGGGGAGTTGGTGCTTTCTTTTCCTTTTTTTTTTTTTTCCAGGGGGAGGGAGGAGAGGAAGGAGGGGGATCAGAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab